CuGenDBv2

Gene ID	HG10007877
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	long chain acyl-CoA synthetase 2
Genome location	Chr10:16363184..16363585
RNA-Seq Expression	HG10007877
Synteny	HG10007877
Gene Ontology terms	GO:0001676 - long-chain fatty acid metabolic process (biological process) GO:0010025 - wax biosynthetic process (biological process) GO:0010143 - cutin biosynthetic process (biological process) GO:0005783 - endoplasmic reticulum (cellular component) GO:0016020 - membrane (cellular component) GO:0004467 - long-chain fatty acid-CoA ligase activity (molecular function)
InterPro domains	IPR000873 - AMP-dependent synthetase/ligase IPR042099 - ANL, N-terminal domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0045965.1 long chain acyl-CoA synthetase 2 [Cucumis melo var. makuwa]

3.3e-57

80.14

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRKMLFDYAY YK+G+LKKGLLQEKAAPLLD+LVFDKIKEAFG
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI
        GRV L             +FLR+TSCATLSQGYGLTESCGGCFTSI
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI

TYK13620.1 long chain acyl-CoA synthetase 2 [Cucumis melo var. makuwa]

3.3e-57

80.14

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRKMLFDYAY YK+G+LKKGLLQEKAAPLLD+LVFDKIKEAFG
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI
        GRV L             +FLR+TSCATLSQGYGLTESCGGCFTSI
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI

XP_008459243.1 PREDICTED: long chain acyl-CoA synthetase 2 [Cucumis melo]

3.3e-57

80.14

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRKMLFDYAY YK+G+LKKGLLQEKAAPLLD+LVFDKIKEAFG
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI
        GRV L             +FLR+TSCATLSQGYGLTESCGGCFTSI
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI

XP_011649216.1 long chain acyl-CoA synthetase 2 [Cucumis sativus]

7.3e-57

80.14

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRKMLFDYAY YK+G+LKKGLLQEKAAPLLD+LVFDKIKEAFG
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI
        GRV L             +FLR+TSCATLSQGYGLTESCGGCFTSI
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI

XP_038901459.1 long chain acyl-CoA synthetase 2 [Benincasa hispida]

2.1e-56

78.77

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        METYCIYKGS  GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRKMLFDYAYNYK+G+LKKGLL +KAAPLLD+LVFDKIKEAFG
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI
        GRV L             +FLR+TSCATLSQGYGLTESCGGCFTSI
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LL21 AMP-binding domain-containing protein

3.5e-57

80.14

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRKMLFDYAY YK+G+LKKGLLQEKAAPLLD+LVFDKIKEAFG
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI
        GRV L             +FLR+TSCATLSQGYGLTESCGGCFTSI
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI

A0A1S3CAY4 long chain acyl-CoA synthetase 2

1.6e-57

80.14

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRKMLFDYAY YK+G+LKKGLLQEKAAPLLD+LVFDKIKEAFG
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI
        GRV L             +FLR+TSCATLSQGYGLTESCGGCFTSI
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI

A0A5A7TX35 Long chain acyl-CoA synthetase 2

1.6e-57

80.14

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRKMLFDYAY YK+G+LKKGLLQEKAAPLLD+LVFDKIKEAFG
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI
        GRV L             +FLR+TSCATLSQGYGLTESCGGCFTSI
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI

A0A5D3CQ95 Long chain acyl-CoA synthetase 2

1.6e-57

80.14

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRKMLFDYAY YK+G+LKKGLLQEKAAPLLD+LVFDKIKEAFG
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI
        GRV L             +FLR+TSCATLSQGYGLTESCGGCFTSI
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI

A0A6J1JE62 long chain acyl-CoA synthetase 2

8.7e-56

78.08

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        METYCIYKGSS GF  GDIRFLL D+QELKPTI  GVPRVYDRIY GILNKVS GGSLRKMLFDYAYNYK+G+L KG+ QEKAAPLLD+LVFDKIKEAFG
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI
        GRV L             +FLR+TSCATLSQGYGLTESCGGC TSI
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI

SwissProt top hits

e value

%identity

Alignment

M4ISH1 Probable CoA ligase CCL6

2.0e-49

65.07

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        +E YCIYKGS+ G+  GDIRFL+ D+QELKPTI  GVPRVYDRIY GI +KVS GG+L+KMLF YAYNYKM +++KGL   +AAPL+D+L FDKIK+ FG
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYLKF-------------LRITSCATLSQGYGLTESCGGCFTSI
        GR+ L F             LR+TSCA LSQGYGLTESCGGC TSI
Subjt:  GRVYLKF-------------LRITSCATLSQGYGLTESCGGCFTSI

Q9C7W4 Long chain acyl-CoA synthetase 3

1.7e-32

45.89

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        +E  CIY+ +S GF  GD++ L+ D+  LKPT+   VPRV +RIY G+  K+S GG ++K LF++A+ YK  +++KG   E+A+P+ D++VF K+KE  G
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI
        G V L              FLR+ +CA + QGYGLTESCGG F SI
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI

Q9T009 Long chain acyl-CoA synthetase 5

1.8e-29

43.45

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        +E   I  G S GF  GD++ L+ D+ ELKP+I   VPRV DR+Y G+  K+S GG  +K +FD A++YK G++KKG     A+P  D+LVF+K+K+  G
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTS
        G V +              FLR+ +C  + QGYGLTESC G F +
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTS

Q9T0A0 Long chain acyl-CoA synthetase 4

1.1e-31

45.21

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        +E   I  G++ GF  GD++ L+ D+ ELKPTI   VPRV DR+Y G+  K+S GG L+K +FD A++YK G++KKG    +A+PL D+LVF K+K+  G
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI
        G V +              FLR+ +C  + QGYGLTESC G F S+
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI

Q9XIA9 Long chain acyl-CoA synthetase 2

9.0e-42

55.48

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        ME Y + +GSS G+  GDIR+L+ D+Q LKPT+  GVPRVYD++Y GI+ K+S  G +RK LFD+AYNYK+G+++KG  QE+A+P LDRL+FDKIKEA G
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI
        GR ++             +FLRI   + LSQGYGLTESCGG FT++
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI

Arabidopsis top hits

e value

%identity

Alignment

AT1G49430.1 long-chain acyl-CoA synthetase 2

6.4e-43

55.48

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        ME Y + +GSS G+  GDIR+L+ D+Q LKPT+  GVPRVYD++Y GI+ K+S  G +RK LFD+AYNYK+G+++KG  QE+A+P LDRL+FDKIKEA G
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI
        GR ++             +FLRI   + LSQGYGLTESCGG FT++
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI

AT1G64400.1 AMP-dependent synthetase and ligase family protein

1.2e-33

45.89

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        +E  CIY+ +S GF  GD++ L+ D+  LKPT+   VPRV +RIY G+  K+S GG ++K LF++A+ YK  +++KG   E+A+P+ D++VF K+KE  G
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI
        G V L              FLR+ +CA + QGYGLTESCGG F SI
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI

AT2G47240.1 AMP-dependent synthetase and ligase family protein

6.0e-25

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Query:  ETYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGG
        E Y   KG+S G+ HG++  L  D+QELKPT + GVPRV++RI+ GI   +      R+ +F+  Y +K+  L +G    KA+P+ D + F KI++  GG
Subjt:  ETYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGG

Query:  RVYL-------------KFLRITSCATLSQGYGLTESCGG
        R+ L             +FLR+T C  + QGYGLTE+ GG
Subjt:  RVYL-------------KFLRITSCATLSQGYGLTESCGG

AT4G11030.1 AMP-dependent synthetase and ligase family protein

1.2e-30

43.45

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        +E   I  G S GF  GD++ L+ D+ ELKP+I   VPRV DR+Y G+  K+S GG  +K +FD A++YK G++KKG     A+P  D+LVF+K+K+  G
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTS
        G V +              FLR+ +C  + QGYGLTESC G F +
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTS

AT4G23850.1 AMP-dependent synthetase and ligase family protein

7.8e-33

45.21

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Query:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG
        +E   I  G++ GF  GD++ L+ D+ ELKPTI   VPRV DR+Y G+  K+S GG L+K +FD A++YK G++KKG    +A+PL D+LVF K+K+  G
Subjt:  METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFG

Query:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI
        G V +              FLR+ +C  + QGYGLTESC G F S+
Subjt:  GRVYL-------------KFLRITSCATLSQGYGLTESCGGCFTSI

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAGACCTATTGCATCTACAAGGGTTCATCTTTTGGGTTTCGGCATGGGGACATCAGGTTTTTGCTGGTTGATATGCAGGAACTAAAGCCAACAATAGTTTTTGGAGT
TCCTAGAGTCTATGATCGTATTTATTATGGAATTCTGAACAAAGTTTCTTTTGGAGGTAGTTTGCGAAAGATGTTATTTGATTATGCATACAATTACAAGATGGGACATC
TGAAGAAGGGTCTGCTCCAGGAAAAAGCAGCCCCTCTCTTGGACAGGCTTGTATTTGACAAGATAAAAGAAGCATTTGGTGGAAGAGTTTATCTTAAGTTCTTGAGGATT
ACTAGTTGTGCAACTTTAAGCCAAGGATATGGCCTTACAGAAAGTTGTGGTGGATGTTTTACATCCATATAG

mRNA sequence

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Protein sequence

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METYCIYKGSSFGFRHGDIRFLLVDMQELKPTIVFGVPRVYDRIYYGILNKVSFGGSLRKMLFDYAYNYKMGHLKKGLLQEKAAPLLDRLVFDKIKEAFGGRVYLKFLRI
TSCATLSQGYGLTESCGGCFTSI

HG10007877 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome