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HG10007915 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007915
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionphosphoribulokinase
Genome locationChr10:17234322..17234858
RNA-Seq ExpressionHG10007915
SyntenyHG10007915
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0019253 - reductive pentose-phosphate cycle (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0008974 - phosphoribulokinase activity (molecular function)
InterPro domainsIPR006083 - Phosphoribulokinase/uridine kinase
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053006.1 phosphoribulokinase [Cucumis melo var. makuwa]2.0e-4793.94Show/hide
Query:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        MA+RGH+ ESIKASIEARKPDFDAYI+PQKQYADA+MEVLPTRLIPNDNEGKILRVRLIMKEGI+NFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
Subjt:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

XP_004146110.1 phosphoribulokinase, chloroplastic [Cucumis sativus]8.3e-4690.91Show/hide
Query:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        MA+RGH+ ESIKASIEARKPDFDAYI+PQKQYADA+MEVLPTRLIPND+EGKILRVRLIMKEGI+NF+PVYLFDEGSTISWIPCGRKL+CSYPGIRLSC
Subjt:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

XP_008448619.1 PREDICTED: phosphoribulokinase, chloroplastic-like [Cucumis melo]2.0e-4793.94Show/hide
Query:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        MA+RGH+ ESIKASIEARKPDFDAYI+PQKQYADA+MEVLPTRLIPNDNEGKILRVRLIMKEGI+NFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
Subjt:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

XP_022145315.1 phosphoribulokinase, chloroplastic [Momordica charantia]1.1e-4589.9Show/hide
Query:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        MA+RGH+ ESIKASIEARKPDFDAYI+PQKQYADA++EVLPTRLIPNDNEGKILRVRLIMKEG+K+FNPVYLFDEGSTISWIPCGRKLTCSYPGI+L C
Subjt:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

XP_038892200.1 phosphoribulokinase, chloroplastic-like [Benincasa hispida]2.0e-4793.94Show/hide
Query:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        MA+RGH+ ESIKASIEARKPDFDAYI+PQKQYADA+MEVLPTRLIPNDNEGKILRVRLIMKEGI+NFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
Subjt:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

TrEMBL top hitse value%identityAlignment
A0A0A0L1R3 Phosphoribulokinase4.0e-4690.91Show/hide
Query:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        MA+RGH+ ESIKASIEARKPDFDAYI+PQKQYADA+MEVLPTRLIPND+EGKILRVRLIMKEGI+NF+PVYLFDEGSTISWIPCGRKL+CSYPGIRLSC
Subjt:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

A0A1S3BK48 Phosphoribulokinase9.6e-4893.94Show/hide
Query:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        MA+RGH+ ESIKASIEARKPDFDAYI+PQKQYADA+MEVLPTRLIPNDNEGKILRVRLIMKEGI+NFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
Subjt:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

A0A5A7UFL3 Phosphoribulokinase9.6e-4893.94Show/hide
Query:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        MA+RGH+ ESIKASIEARKPDFDAYI+PQKQYADA+MEVLPTRLIPNDNEGKILRVRLIMKEGI+NFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
Subjt:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

A0A6J1CU49 Phosphoribulokinase5.3e-4689.9Show/hide
Query:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        MA+RGH+ ESIKASIEARKPDFDAYI+PQKQYADA++EVLPTRLIPNDNEGKILRVRLIMKEG+K+FNPVYLFDEGSTISWIPCGRKLTCSYPGI+L C
Subjt:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

A0A6J1HNB8 Phosphoribulokinase5.8e-4588.89Show/hide
Query:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
        MA+RGH+ ESIKASIEARKPDFDAYI+PQKQ+ADA++EVLPTRLIPND EGKILRVRLIM+EGI++FNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC
Subjt:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSC

SwissProt top hitse value%identityAlignment
P09559 Phosphoribulokinase, chloroplastic9.0e-4379.59Show/hide
Query:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLS
        M +RGH+ ESIKASIE+RKPDFDAYI+PQKQ+AD ++EVLPT LIP+D+EGK+LRVR+I KEG+K FNPVYLFDEGSTISWIPCGRKLTCSYPGI+ S
Subjt:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLS

P19824 Phosphoribulokinase, chloroplastic2.5e-3774.23Show/hide
Query:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRL
        MA+RGH+ ESIK+SI ARKPDFDAYI+PQK+ AD +++VLPT+L+P D++G+ LRVRLIMKEG K F+PVYLFDEGSTISWIPCGRKLTCS+PGI++
Subjt:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRL

P25697 Phosphoribulokinase, chloroplastic9.6e-4583.67Show/hide
Query:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLS
        MA+RGH+ ESIKASIEARKPDFDA+I+PQKQYADA++EVLPT LIP+DNEGK+LRVRLIMKEG+K F+PVYLFDEGSTISWIPCGRKLTCSYPGI+ +
Subjt:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLS

P26302 Phosphoribulokinase, chloroplastic3.3e-4584.69Show/hide
Query:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLS
        MA+RGH+ ESIKASIEARKPDFDA+I+PQKQYADA++EVLPT+LIP+DNEGK+LRV+LIMKEGIK FNPVYLFDEGSTI+WIPCGRKLTCSYPGI+ S
Subjt:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLS

P27774 Phosphoribulokinase, chloroplastic3.1e-4382.29Show/hide
Query:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIR
        MA+RGH+ ESIKASIEARKPDFDAYI+PQKQYADA++EVLPT+LIP DNEGK+LRVRLI KEG++ F+PVYLFDEGS+I+WIPCGRKLTCSYPGI+
Subjt:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIR

Arabidopsis top hitse value%identityAlignment
AT1G32060.1 phosphoribulokinase6.8e-4683.67Show/hide
Query:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLS
        MA+RGH+ ESIKASIEARKPDFDA+I+PQKQYADA++EVLPT LIP+DNEGK+LRVRLIMKEG+K F+PVYLFDEGSTISWIPCGRKLTCSYPGI+ +
Subjt:  MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGAGAGGCCACAACTTTGAGAGTATCAAAGCAAGCATTGAAGCACGAAAGCCAGATTTCGATGCATATATCAATCCACAGAAGCAATACGCAGATGCGATGAT
GGAAGTGTTGCCGACGCGATTGATTCCAAATGACAATGAAGGGAAAATTCTTAGGGTTAGATTGATAATGAAAGAAGGAATCAAGAATTTCAATCCAGTTTACCTATTCG
ATGAAGGATCTACAATCTCATGGATTCCTTGTGGAAGAAAGCTTACATGTTCTTATCCTGGAATCAGGCTGTCCTGTGATGGCTACTGCACGGCTCCAACCGAACTCGAC
GACTACTGCACGGCTCCAACCCACTCGACGACTACTGCACGGCTCCAATCCACTCGACTCGACTGCTGCACGACGACGGCGGCAAAAACCCTGTTTGAGAGGAAAAGATG
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGAGAGGCCACAACTTTGAGAGTATCAAAGCAAGCATTGAAGCACGAAAGCCAGATTTCGATGCATATATCAATCCACAGAAGCAATACGCAGATGCGATGAT
GGAAGTGTTGCCGACGCGATTGATTCCAAATGACAATGAAGGGAAAATTCTTAGGGTTAGATTGATAATGAAAGAAGGAATCAAGAATTTCAATCCAGTTTACCTATTCG
ATGAAGGATCTACAATCTCATGGATTCCTTGTGGAAGAAAGCTTACATGTTCTTATCCTGGAATCAGGCTGTCCTGTGATGGCTACTGCACGGCTCCAACCGAACTCGAC
GACTACTGCACGGCTCCAACCCACTCGACGACTACTGCACGGCTCCAATCCACTCGACTCGACTGCTGCACGACGACGGCGGCAAAAACCCTGTTTGAGAGGAAAAGATG
TTGA
Protein sequenceShow/hide protein sequence
MAKRGHNFESIKASIEARKPDFDAYINPQKQYADAMMEVLPTRLIPNDNEGKILRVRLIMKEGIKNFNPVYLFDEGSTISWIPCGRKLTCSYPGIRLSCDGYCTAPTELD
DYCTAPTHSTTTARLQSTRLDCCTTTAAKTLFERKRC