; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10007953 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007953
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionserine-rich protein-related
Genome locationChr10:17828360..17828617
RNA-Seq ExpressionHG10007953
SyntenyHG10007953
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046595.1 hypothetical protein E6C27_scaffold114G001360 [Cucumis melo var. makuwa]7.5e-3185.88Show/hide
Query:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVESA
        M S  KM ISIPS+AKSAGDGDGVA HSCSSK QCLCSPTTHPGSFRCRLHRSNSLPW+RQSKS   SADAS+TSDLSPKSVESA
Subjt:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVESA

KAE7998752.1 hypothetical protein FH972_003263 [Carpinus fangiana]1.1e-1051.19Show/hide
Query:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVES
        M+SHG + +   S++  +G  + V   S S KGQCLCSPTTH GSFRCR HRS+S  W ++SKS  V A  S  + +SPKS+ES
Subjt:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVES

KAE8653119.1 hypothetical protein Csa_020123 [Cucumis sativus]5.9e-2884.15Show/hide
Query:  KMRISIPSSAKSAGDGDGVA--AHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVESA
        KM I IPS+AKSAG+GDGV   +HSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPW+RQSKS   SADAS+TSDLSPKSVESA
Subjt:  KMRISIPSSAKSAGDGDGVA--AHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVESA

KAG6589904.1 hypothetical protein SDJN03_15327, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3289.41Show/hide
Query:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSK-SAVVSADASHTSDLSPKSVES
        MS+HGK+RISIPSSAKS GDGDGVAAH+CSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTR SK +A  SADASHTSDLSPKSVES
Subjt:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSK-SAVVSADASHTSDLSPKSVES

OUZ99929.1 hypothetical protein BVC80_9069g38 [Macleaya cordata]5.0e-1154.65Show/hide
Query:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSS-KGQCLCSPTTHPGSFRCRLHRSNSLPW-TRQSKSAVVSADASHTSDLSPKSVES
        M+SHG + +S+  S K  G+G  VA  S +S KGQCLCSPTTH GSFRCR HRS S  W  ++SKS   ++ A+ T+ +SPKSVES
Subjt:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSS-KGQCLCSPTTHPGSFRCRLHRSNSLPW-TRQSKSAVVSADASHTSDLSPKSVES

TrEMBL top hitse value%identityAlignment
A0A0A0LWJ0 Uncharacterized protein4.4e-2981.61Show/hide
Query:  MSSHGKMRISIPSSAKSAGDGDGVA--AHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVESA
        M S  KM I IPS+AKSAG+GDGV   +HSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPW+RQSKS   SADAS+TSDLSPKSVESA
Subjt:  MSSHGKMRISIPSSAKSAGDGDGVA--AHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVESA

A0A200PNZ0 Uncharacterized protein2.4e-1154.65Show/hide
Query:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSS-KGQCLCSPTTHPGSFRCRLHRSNSLPW-TRQSKSAVVSADASHTSDLSPKSVES
        M+SHG + +S+  S K  G+G  VA  S +S KGQCLCSPTTH GSFRCR HRS S  W  ++SKS   ++ A+ T+ +SPKSVES
Subjt:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSS-KGQCLCSPTTHPGSFRCRLHRSNSLPW-TRQSKSAVVSADASHTSDLSPKSVES

A0A5D3BJV5 Uncharacterized protein3.6e-3185.88Show/hide
Query:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVESA
        M S  KM ISIPS+AKSAGDGDGVA HSCSSK QCLCSPTTHPGSFRCRLHRSNSLPW+RQSKS   SADAS+TSDLSPKSVESA
Subjt:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVESA

A0A5N6QHE2 Uncharacterized protein5.4e-1151.19Show/hide
Query:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVES
        M+SHG + +   S++  +G  + V   S S KGQCLCSPTTH GSFRCR HRS+S  W ++SKS  V A  S  + +SPKS+ES
Subjt:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVES

A0A6A1UK22 Uncharacterized protein1.0e-0955.29Show/hide
Query:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVESA
        M+S G  ++S+ ++ KS G G+ V   S S KGQCLCSPTTH GSFRCRLHRS+S  W ++SKS   S   S  + LSPKSVES+
Subjt:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVESA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein1.5e-0534.78Show/hide
Query:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSA
        M+  G M      +A   G   G++  +  +K  C+CSPTTHPGSF+C+LHR+ SL   +  ++ ++ +
Subjt:  MSSHGKMRISIPSSAKSAGDGDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSA

AT1G67910.1 unknown protein9.5e-0841.18Show/hide
Query:  SSHGKMRISIPSSAKSAGD--GDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVES
        ++ G M++ I S   SA +    G++  +  +K  CLCSPTTHPGSFRCR+HRS SL  T+       S +A+   D  PK  +S
Subjt:  SSHGKMRISIPSSAKSAGD--GDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVES

AT1G67910.2 unknown protein9.5e-0841.18Show/hide
Query:  SSHGKMRISIPSSAKSAGD--GDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVES
        ++ G M++ I S   SA +    G++  +  +K  CLCSPTTHPGSFRCR+HRS SL  T+       S +A+   D  PK  +S
Subjt:  SSHGKMRISIPSSAKSAGD--GDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVES

AT3G13227.1 serine-rich protein-related1.2e-0552.17Show/hide
Query:  PSSAKSAGDGDGVAAHSCSS--KGQCLCSPTTHPGSFRCRLHRSNS
        P   +  G G G    S SS  +  CLC+PTTHPGSFRCR HR N+
Subjt:  PSSAKSAGDGDGVAAHSCSS--KGQCLCSPTTHPGSFRCRLHRSNS

AT5G25280.1 serine-rich protein-related4.4e-0562.96Show/hide
Query:  SKGQCLCSPTTHPGSFRCRLHRSNSLP
        S+ +C+CSPTTHPGSFRC LH++ + P
Subjt:  SKGQCLCSPTTHPGSFRCRLHRSNSLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCCCACGGCAAAATGCGCATCAGCATCCCTTCCTCCGCCAAAAGCGCCGGCGACGGGGACGGCGTGGCGGCGCACTCCTGTTCATCGAAAGGCCAATGCCTCTG
TTCGCCCACCACTCATCCCGGTTCCTTCCGGTGTCGGCTTCACCGTTCGAATTCGTTGCCCTGGACCAGGCAGTCCAAGTCCGCCGTCGTATCGGCCGACGCCTCTCACA
CCTCAGATCTCTCTCCAAAGTCGGTTGAATCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCCCACGGCAAAATGCGCATCAGCATCCCTTCCTCCGCCAAAAGCGCCGGCGACGGGGACGGCGTGGCGGCGCACTCCTGTTCATCGAAAGGCCAATGCCTCTG
TTCGCCCACCACTCATCCCGGTTCCTTCCGGTGTCGGCTTCACCGTTCGAATTCGTTGCCCTGGACCAGGCAGTCCAAGTCCGCCGTCGTATCGGCCGACGCCTCTCACA
CCTCAGATCTCTCTCCAAAGTCGGTTGAATCTGCTTGA
Protein sequenceShow/hide protein sequence
MSSHGKMRISIPSSAKSAGDGDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWTRQSKSAVVSADASHTSDLSPKSVESA