; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10007954 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007954
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr10:17833018..17834416
RNA-Seq ExpressionHG10007954
SyntenyHG10007954
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648586.1 hypothetical protein Csa_008875 [Cucumis sativus]9.3e-0551.92Show/hide
Query:  VSKSCGLKWVFQDHLSRVHLVGLKFVHHYNEMKILEAIDICYGLESISSLHL
        +S S GL  V QDH  +V LVG KFV    E+++LEA+ IC+GL++ISS+H+
Subjt:  VSKSCGLKWVFQDHLSRVHLVGLKFVHHYNEMKILEAIDICYGLESISSLHL
XP_038886170.1 uncharacterized protein LOC120076417 [Benincasa hispida]2.8e-1753.19Show/hide
Query:  WRPSLLFSLRSDMKVMSFWKLNVDAAWNLVSKSCGLKWVFQDHLSRVHLVGLKFVHHYNEMKILEAIDICYGLESISSLHLSNLFVESDCLEVV
        W PS  F          +WKLN+DA+WN    +CGL WVF DHL RV + GLKFV    ++ ILEAI IC+GLE +SS+ +SN+ VESDCLE V
Subjt:  WRPSLLFSLRSDMKVMSFWKLNVDAAWNLVSKSCGLKWVFQDHLSRVHLVGLKFVHHYNEMKILEAIDICYGLESISSLHLSNLFVESDCLEVV
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACTAGAATGTTGAAAGAATCTCGGTGTGCCTCGAAAGAATTCAAGACGTCAAGCCTATTCTCAGCATCTCTATCAGGTGGAGGGCTAGAGACTTGGGATCGGTT
GGACCCGAAAGAATTCTTTATTGCTATGATGGAGGAGGGAAGTAATGTGGCATCAGGATCAGAACCCTCTTATTTGCCTTGTTGGGTATTCTCTATTGTGTTTGAGGAAG
TTGTTCTGAATTTGATTGACATATCCTTAAGATTAGGCATGAAGGGAATGGATCTGGTAGTAAAGGCATTGTGGAGGCCCTCCCTTCTATTCAGCCTCCGATCAGACATG
AAGGTGATGTCCTTTTGGAAGTTGAATGTTGATGCTGCTTGGAATCTTGTCTCTAAGTCGTGTGGTCTAAAATGGGTGTTTCAAGACCATCTTAGTCGTGTTCATCTTGT
TGGTTTGAAATTTGTCCATCACTACAATGAGATGAAAATTCTTGAAGCGATCGACATTTGTTATGGGCTAGAGAGTATTTCTTCACTCCATCTTTCAAATCTTTTTGTGG
AGTCTGACTGTTTGGAGGTTGTCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGACTAGAATGTTGAAAGAATCTCGGTGTGCCTCGAAAGAATTCAAGACGTCAAGCCTATTCTCAGCATCTCTATCAGGTGGAGGGCTAGAGACTTGGGATCGGTT
GGACCCGAAAGAATTCTTTATTGCTATGATGGAGGAGGGAAGTAATGTGGCATCAGGATCAGAACCCTCTTATTTGCCTTGTTGGGTATTCTCTATTGTGTTTGAGGAAG
TTGTTCTGAATTTGATTGACATATCCTTAAGATTAGGCATGAAGGGAATGGATCTGGTAGTAAAGGCATTGTGGAGGCCCTCCCTTCTATTCAGCCTCCGATCAGACATG
AAGGTGATGTCCTTTTGGAAGTTGAATGTTGATGCTGCTTGGAATCTTGTCTCTAAGTCGTGTGGTCTAAAATGGGTGTTTCAAGACCATCTTAGTCGTGTTCATCTTGT
TGGTTTGAAATTTGTCCATCACTACAATGAGATGAAAATTCTTGAAGCGATCGACATTTGTTATGGGCTAGAGAGTATTTCTTCACTCCATCTTTCAAATCTTTTTGTGG
AGTCTGACTGTTTGGAGGTTGTCCATTAG
Protein sequenceShow/hide protein sequence
METRMLKESRCASKEFKTSSLFSASLSGGGLETWDRLDPKEFFIAMMEEGSNVASGSEPSYLPCWVFSIVFEEVVLNLIDISLRLGMKGMDLVVKALWRPSLLFSLRSDM
KVMSFWKLNVDAAWNLVSKSCGLKWVFQDHLSRVHLVGLKFVHHYNEMKILEAIDICYGLESISSLHLSNLFVESDCLEVVH