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HG10007957 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007957
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionFRIGIDA-like protein
Genome locationChr10:17846014..17846334
RNA-Seq ExpressionHG10007957
SyntenyHG10007957
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD44715.1 TPA_asm: hypothetical protein HUJ06_002945 [Nelumbo nucifera]1.7e-1160.94Show/hide
Query:  WKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA
        W+ LWR++ +EK+K+        FYSS P  +PYDA+SYSQNFDQG+A  E DNLSRSFSARFA
Subjt:  WKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA

KAE8653121.1 hypothetical protein Csa_019717, partial [Cucumis sativus]1.1e-4285.85Show/hide
Query:  MQIMGKHGRKTIRLGGWRGENK-QPNMWKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFAIANVASTIF
        M+IM K GR TIRLGGWRGENK QPNMWK LWRKLRREKRK+LE   TTTFYSSGPKLIPYD FSYSQNFDQGTAGEELDNLSRSFSARFA+A+VAS  F
Subjt:  MQIMGKHGRKTIRLGGWRGENK-QPNMWKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFAIANVASTIF

Query:  LHKQHL
        LHKQHL
Subjt:  LHKQHL

KAF5191987.1 hypothetical protein FRX31_018427 [Thalictrum thalictroides]1.3e-1155.56Show/hide
Query:  GENKQPNMWKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA
        G++     WK  WRK ++E+RKM        FYSS P  +PYDA++YSQNFDQGTA  E DNL RSFSAR+A
Subjt:  GENKQPNMWKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA

KAG6587950.1 hypothetical protein SDJN03_16515, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2063.73Show/hide
Query:  IMGKHGRK-TIRLGGWRGENKQPNMWKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFAIANVASTIFLH
        +MGK   K TIRLG WR    QPN+WK LWRKLRREKR        TT YSSG  LIPYD FSYS NFDQG A EE D L RSFSARFA+A+ AS  FL 
Subjt:  IMGKHGRK-TIRLGGWRGENKQPNMWKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFAIANVASTIFLH

Query:  KQ
         Q
Subjt:  KQ

KAG7021839.1 hypothetical protein SDJN02_15567, partial [Cucurbita argyrosperma subsp. argyrosperma]7.4e-2061.76Show/hide
Query:  IMGKHGRK-TIRLGGWRGENKQPNMWKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFAIANVASTIFLH
        +MGK   K TIRLG WR    QPN+WK LWRKLRR+KR        TT YSSG  LIPYD FSYS NFDQG A E+ D L RSFSARFA+A+ AS  FL 
Subjt:  IMGKHGRK-TIRLGGWRGENKQPNMWKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFAIANVASTIFLH

Query:  KQ
         Q
Subjt:  KQ

TrEMBL top hitse value%identityAlignment
A0A0A0LWX3 Uncharacterized protein5.1e-4385.85Show/hide
Query:  MQIMGKHGRKTIRLGGWRGENK-QPNMWKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFAIANVASTIF
        M+IM K GR TIRLGGWRGENK QPNMWK LWRKLRREKRK+LE   TTTFYSSGPKLIPYD FSYSQNFDQGTAGEELDNLSRSFSARFA+A+VAS  F
Subjt:  MQIMGKHGRKTIRLGGWRGENK-QPNMWKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFAIANVASTIF

Query:  LHKQHL
        LHKQHL
Subjt:  LHKQHL

A0A151S3I6 Uncharacterized protein1.5e-1057.81Show/hide
Query:  WKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA
        WK LW KL++EK+K+ E        S+ P  +PYD +SYSQNFDQGTA +E DNLSRSF  RFA
Subjt:  WKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA

A0A2G5FAL4 Uncharacterized protein1.2e-1043.43Show/hide
Query:  GRKTIRLGGWRGENKQPNM----------------WKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA
        GR+++R G    EN+   +                W+ LWRKL++E+++M        F SS P  +PYDA++YSQNFDQGTA  E DNL RSFSAR+A
Subjt:  GRKTIRLGGWRGENKQPNM----------------WKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA

A0A371GGA5 Uncharacterized protein (Fragment)1.2e-1057.81Show/hide
Query:  WKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA
        WK LW KL++EK+K+ E        S+ P  +PYD ++YSQNFDQGTA +E DNLSRSFS RFA
Subjt:  WKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA

A0A7J6W4V3 Uncharacterized protein6.1e-1255.56Show/hide
Query:  GENKQPNMWKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA
        G++     WK  WRK ++E+RKM        FYSS P  +PYDA++YSQNFDQGTA  E DNL RSFSAR+A
Subjt:  GENKQPNMWKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATTATGGGAAAGCATGGAAGGAAAACAATCAGATTGGGAGGTTGGAGAGGAGAAAATAAGCAGCCCAATATGTGGAAGGCTTTGTGGAGGAAACTGAGAAGAGA
AAAGAGAAAGATGTTAGAAGAGTGTGAAACGACGACGTTTTATTCTTCAGGCCCCAAGTTGATTCCTTACGATGCTTTCTCTTATTCTCAGAATTTCGATCAAGGCACCG
CCGGTGAAGAACTTGATAATCTTTCCCGATCCTTCTCCGCCCGCTTCGCTATCGCCAATGTTGCTTCCACAATCTTTCTTCACAAACAACATCTTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATTATGGGAAAGCATGGAAGGAAAACAATCAGATTGGGAGGTTGGAGAGGAGAAAATAAGCAGCCCAATATGTGGAAGGCTTTGTGGAGGAAACTGAGAAGAGA
AAAGAGAAAGATGTTAGAAGAGTGTGAAACGACGACGTTTTATTCTTCAGGCCCCAAGTTGATTCCTTACGATGCTTTCTCTTATTCTCAGAATTTCGATCAAGGCACCG
CCGGTGAAGAACTTGATAATCTTTCCCGATCCTTCTCCGCCCGCTTCGCTATCGCCAATGTTGCTTCCACAATCTTTCTTCACAAACAACATCTTCAATAA
Protein sequenceShow/hide protein sequence
MQIMGKHGRKTIRLGGWRGENKQPNMWKALWRKLRREKRKMLEECETTTFYSSGPKLIPYDAFSYSQNFDQGTAGEELDNLSRSFSARFAIANVASTIFLHKQHLQ