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HG10007972 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10007972
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontranscriptional regulator SUPERMAN
Genome locationChr10:18059142..18063878
RNA-Seq ExpressionHG10007972
SyntenyHG10007972
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593853.1 Transcriptional regulator SUPERMAN, partial [Cucurbita argyrosperma subsp. sororia]3.1e-0460.87Show/hide
Query:  PHL---NPHPIKFLKLYDFSSFNGEEADESDRGCKIWKKVNKFIKK
        PH    +  PIKFLKLYDFSS +GEE  E+D  CKIWK V KF+K+
Subjt:  PHL---NPHPIKFLKLYDFSSFNGEEADESDRGCKIWKKVNKFIKK

XP_008465205.1 PREDICTED: transcriptional regulator SUPERMAN [Cucumis melo]2.6e-1182.22Show/hide
Query:  PIKFLKLYDFSSFNGEEA-DESDRGCKIWKKVNKFIKKKEATLLA
        PIKFLKLYDFSSF+GE+A D+SD GCKIWKKVNKF+KKKE  LLA
Subjt:  PIKFLKLYDFSSFNGEEA-DESDRGCKIWKKVNKFIKKKEATLLA

XP_011650145.1 zinc finger protein 3 [Cucumis sativus]5.4e-0976.74Show/hide
Query:  PIKFLKLYDFSSFNGEEA-DESDRGCKIWKKVNKFIKKKEATL
        PIKFLKLYDFSSF+GE+A D+SD GC+IWKKVNKF+KK+ A L
Subjt:  PIKFLKLYDFSSFNGEEA-DESDRGCKIWKKVNKFIKKKEATL

XP_022930268.1 zinc finger protein 10-like [Cucurbita moschata]3.1e-0460.87Show/hide
Query:  PHL---NPHPIKFLKLYDFSSFNGEEADESDRGCKIWKKVNKFIKK
        PH    +  PIKFLKLYDFSS +GEE  E+D  CKIWK V KF+K+
Subjt:  PHL---NPHPIKFLKLYDFSSFNGEEADESDRGCKIWKKVNKFIKK

XP_038875029.1 transcriptional regulator TAC1-like [Benincasa hispida]5.4e-0980.95Show/hide
Query:  PIKFLKLYDFSSFNGEEADESDRGCKIWKKVNKFIKKKEATL
        PIKFLKLYDFSSF+GEE DESD GCKIWKKVNKF+K + A L
Subjt:  PIKFLKLYDFSSFNGEEADESDRGCKIWKKVNKFIKKKEATL

TrEMBL top hitse value%identityAlignment
A0A0A0LNQ1 C2H2-type domain-containing protein2.6e-0976.74Show/hide
Query:  PIKFLKLYDFSSFNGEEA-DESDRGCKIWKKVNKFIKKKEATL
        PIKFLKLYDFSSF+GE+A D+SD GC+IWKKVNKF+KK+ A L
Subjt:  PIKFLKLYDFSSFNGEEA-DESDRGCKIWKKVNKFIKKKEATL

A0A1S3CPU8 transcriptional regulator SUPERMAN1.3e-1182.22Show/hide
Query:  PIKFLKLYDFSSFNGEEA-DESDRGCKIWKKVNKFIKKKEATLLA
        PIKFLKLYDFSSF+GE+A D+SD GCKIWKKVNKF+KKKE  LLA
Subjt:  PIKFLKLYDFSSFNGEEA-DESDRGCKIWKKVNKFIKKKEATLLA

A0A5D3CAK0 Transcriptional regulator SUPERMAN1.3e-1182.22Show/hide
Query:  PIKFLKLYDFSSFNGEEA-DESDRGCKIWKKVNKFIKKKEATLLA
        PIKFLKLYDFSSF+GE+A D+SD GCKIWKKVNKF+KKKE  LLA
Subjt:  PIKFLKLYDFSSFNGEEA-DESDRGCKIWKKVNKFIKKKEATLLA

A0A6J1EUL3 zinc finger protein 10-like1.5e-0460.87Show/hide
Query:  PHL---NPHPIKFLKLYDFSSFNGEEADESDRGCKIWKKVNKFIKK
        PH    +  PIKFLKLYDFSS +GEE  E+D  CKIWK V KF+K+
Subjt:  PHL---NPHPIKFLKLYDFSSFNGEEADESDRGCKIWKKVNKFIKK

A0A6J1KIV9 transcriptional regulator SUPERMAN-like2.5e-0460.87Show/hide
Query:  PHL---NPHPIKFLKLYDFSSFNGEEADESDRGCKIWKKVNKFIKK
        PH    +  PIKFLKLYDFSS +GEE  E D  CKIWK V KF+K+
Subjt:  PHL---NPHPIKFLKLYDFSSFNGEEADESDRGCKIWKKVNKFIKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATTATGATTTTCATGGATCCTCATCTCAACCCACATCCCATTAAGTTTCTTAAACTGTATGATTTCTCAAGCTTTAATGGTGAAGAAGCCGATGAATCAGATAG
AGGGTGTAAGATTTGGAAGAAGGTCAACAAGTTTATAAAGAAGAAGGAGGCTACTTTGCTTGCCCACCCGCAGTACTTCCACTTCATTTGTCCTACGGGTCATGGTCGTC
ACCGTCGTCGGCCTACCTTTGACGACGGCGGAGAAACCGGCGGAGGAAACGCTGTTTGCTGGTGCTTAAGCGTCTCAAAACTCGATGCTATATCCTTAGACGATGTATCT
TCATGCTATTGTGCTGGCACGACGACGCCGTTTCGGATTAGTGATGAACGGTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCATTATGATTTTCATGGATCCTCATCTCAACCCACATCCCATTAAGTTTCTTAAACTGTATGATTTCTCAAGCTTTAATGGTGAAGAAGCCGATGAATCAGATAG
AGGGTGTAAGATTTGGAAGAAGGTCAACAAGTTTATAAAGAAGAAGGAGGCTACTTTGCTTGCCCACCCGCAGTACTTCCACTTCATTTGTCCTACGGGTCATGGTCGTC
ACCGTCGTCGGCCTACCTTTGACGACGGCGGAGAAACCGGCGGAGGAAACGCTGTTTGCTGGTGCTTAAGCGTCTCAAAACTCGATGCTATATCCTTAGACGATGTATCT
TCATGCTATTGTGCTGGCACGACGACGCCGTTTCGGATTAGTGATGAACGGTTCTGA
Protein sequenceShow/hide protein sequence
MIIMIFMDPHLNPHPIKFLKLYDFSSFNGEEADESDRGCKIWKKVNKFIKKKEATLLAHPQYFHFICPTGHGRHRRRPTFDDGGETGGGNAVCWCLSVSKLDAISLDDVS
SCYCAGTTTPFRISDERF