; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008013 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008013
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr10:18694015..18694263
RNA-Seq ExpressionHG10008013
SyntenyHG10008013
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046741.1 hypothetical protein E6C27_scaffold216G00220 [Cucumis melo var. makuwa]6.7e-2987.8Show/hide
Query:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCSTR
        M+RSSSTSRSFDEFSVDL PDSISSPPLKNEAS VLP+FKSN++A KKEMG  FKSPG NAVHLIPLTLFLCALILWVCSTR
Subjt:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCSTR

KAE8653076.1 hypothetical protein Csa_019861 [Cucumis sativus]8.0e-3090.12Show/hide
Query:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCST
        M+RSSSTSRSF+EFSVDL PDSISSPPLKNEASGVLP+FKSN++A KKEMGS FKSPGENAVHLIPLTLFLCALILWVCST
Subjt:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCST

KAG6587911.1 hypothetical protein SDJN03_16476, partial [Cucurbita argyrosperma subsp. sororia]4.0e-2169.88Show/hide
Query:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEA-SGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCSTR
        MHRSSSTSR+FDE+SVD+PP   SSPPLKNEA   +LP+FK   +  KKEMG HFK PG+NAVHLIPL L L ALILW+CS+R
Subjt:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEA-SGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCSTR

KAG7021797.1 hypothetical protein SDJN02_15525, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-2169.88Show/hide
Query:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEA-SGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCSTR
        MHRSSSTSR+FDE+SVD+PP   SSPPLKNEA   +LP+FK   +  KKEMG HFK PG+NAVHLIPL L L ALILW+CS+R
Subjt:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEA-SGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCSTR

RVW47477.1 hypothetical protein CK203_086512 [Vitis vinifera]3.3e-1561.25Show/hide
Query:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCS
        M+RS+STSR+ DEF V+L P ++ S PLK  AS  LPM+   ++A+KKEM  H KS GENA+HLIPL L LCALILWV S
Subjt:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCS

TrEMBL top hitse value%identityAlignment
A0A067KJC2 Uncharacterized protein6.0e-1561.25Show/hide
Query:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCS
        MHRSSSTSR+ DE SV+   D     P+K  +S  LP++KS+++ASKKE+G H KS GENAVHLIPL L LCALILW+ S
Subjt:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCS

A0A0A0LTP3 Uncharacterized protein7.8e-3190.24Show/hide
Query:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCSTR
        M+RSSSTSRSF+EFSVDL PDSISSPPLKNEASGVLP+FKSN++A KKEMGS FKSPGENAVHLIPLTLFLCALILWVCSTR
Subjt:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCSTR

A0A438EIF2 Uncharacterized protein1.6e-1561.25Show/hide
Query:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCS
        M+RS+STSR+ DEF V+L P ++ S PLK  AS  LPM+   ++A+KKEM  H KS GENA+HLIPL L LCALILWV S
Subjt:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCS

A0A5A7TZH0 Uncharacterized protein3.3e-2987.8Show/hide
Query:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCSTR
        M+RSSSTSRSFDEFSVDL PDSISSPPLKNEAS VLP+FKSN++A KKEMG  FKSPG NAVHLIPLTLFLCALILWVCSTR
Subjt:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCSTR

A0A7J6F8Q8 Uncharacterized protein3.0e-1457.5Show/hide
Query:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCS
        M RSSSTSR+ DEF V+ PP S    P+K+ A+  LP++KSN++A+KKE+G H KS GEN +H+IPL L LC  ILWV S
Subjt:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35658.1 unknown protein1.2e-0741.18Show/hide
Query:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASG-----VLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCS
        M RS+S S   D+ S + P  S S P +K  A       +LP +  N++  KK   S F+S  ENA+H IP+ L LCA+ILW+ S
Subjt:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASG-----VLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCS

AT2G35658.2 unknown protein1.2e-0741.18Show/hide
Query:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASG-----VLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCS
        M RS+S S   D+ S + P  S S P +K  A       +LP +  N++  KK   S F+S  ENA+H IP+ L LCA+ILW+ S
Subjt:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASG-----VLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCS

AT2G35658.3 unknown protein1.2e-0741.18Show/hide
Query:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASG-----VLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCS
        M RS+S S   D+ S + P  S S P +K  A       +LP +  N++  KK   S F+S  ENA+H IP+ L LCA+ILW+ S
Subjt:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASG-----VLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCS

AT4G16840.1 unknown protein5.9e-0741.46Show/hide
Query:  MHRSSSTSRSFDEFSVD--LPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCS
        M RS+S SR  D F      PP S S   ++++   +LP +  N+ A K+E  S F+   EN +HLIPL L LC  ILW+ S
Subjt:  MHRSSSTSRSFDEFSVD--LPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCS

AT5G20045.1 unknown protein1.2e-0437.65Show/hide
Query:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSH---FKSP-GENAVHLIPLTLFLCALILWVCST
        M R   +SR  +EF ++L  DS S   L              ++ +KKE+  H   +KS  GE A+HLIP+ LFLC  +LWV S+
Subjt:  MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSH---FKSP-GENAVHLIPLTLFLCALILWVCST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAGGTCTTCAAGCACTTCTCGGAGCTTCGATGAATTCTCGGTTGACTTGCCACCAGATTCTATAAGCTCCCCACCATTGAAGAATGAAGCTTCTGGTGTTTTGCC
CATGTTTAAGAGTAATAATAATGCCTCCAAGAAAGAAATGGGGTCGCACTTTAAATCTCCAGGAGAAAATGCAGTTCACTTAATCCCTCTTACTCTGTTTCTTTGTGCTT
TAATCCTTTGGGTTTGTTCAACCAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATAGGTCTTCAAGCACTTCTCGGAGCTTCGATGAATTCTCGGTTGACTTGCCACCAGATTCTATAAGCTCCCCACCATTGAAGAATGAAGCTTCTGGTGTTTTGCC
CATGTTTAAGAGTAATAATAATGCCTCCAAGAAAGAAATGGGGTCGCACTTTAAATCTCCAGGAGAAAATGCAGTTCACTTAATCCCTCTTACTCTGTTTCTTTGTGCTT
TAATCCTTTGGGTTTGTTCAACCAGGTAA
Protein sequenceShow/hide protein sequence
MHRSSSTSRSFDEFSVDLPPDSISSPPLKNEASGVLPMFKSNNNASKKEMGSHFKSPGENAVHLIPLTLFLCALILWVCSTR