; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008021 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008021
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionzinc finger Ran-binding domain-containing protein 2-like
Genome locationChr10:18779511..18781374
RNA-Seq ExpressionHG10008021
SyntenyHG10008021
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653078.1 hypothetical protein Csa_020050 [Cucumis sativus]1.1e-8197.06Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTEALAGDWYCTT+SCGAHNYASRPNCFRCGAFKSVYPGDYG+YM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF

XP_004150016.3 zinc finger Ran-binding domain-containing protein 2 isoform X2 [Cucumis sativus]1.1e-8197.06Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTEALAGDWYCTT+SCGAHNYASRPNCFRCGAFKSVYPGDYG+YM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF

XP_008465020.2 PREDICTED: uncharacterized protein LOC103502740 isoform X3 [Cucumis melo]1.1e-8197.06Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTEALAGDWYCTT+SCGAHNYASRPNCFRCGAFKSVYPGDYG+YM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF

XP_008465021.2 PREDICTED: uncharacterized protein LOC103502740 isoform X2 [Cucumis melo]1.1e-8197.06Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTEALAGDWYCTT+SCGAHNYASRPNCFRCGAFKSVYPGDYG+YM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF

XP_011656267.2 zinc finger Ran-binding domain-containing protein 2 isoform X1 [Cucumis sativus]1.1e-8197.06Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTEALAGDWYCTT+SCGAHNYASRPNCFRCGAFKSVYPGDYG+YM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF

TrEMBL top hitse value%identityAlignment
A0A0A0LWE1 Uncharacterized protein5.6e-8297.06Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTEALAGDWYCTT+SCGAHNYASRPNCFRCGAFKSVYPGDYG+YM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF

A0A1S3CMY6 uncharacterized protein LOC103502740 isoform X25.6e-8297.06Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTEALAGDWYCTT+SCGAHNYASRPNCFRCGAFKSVYPGDYG+YM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF

A0A1S3CNB1 uncharacterized protein LOC103502740 isoform X15.6e-8297.06Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTEALAGDWYCTT+SCGAHNYASRPNCFRCGAFKSVYPGDYG+YM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF

A0A1S3CPF6 uncharacterized protein LOC103502740 isoform X35.6e-8297.06Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTEALAGDWYCTT+SCGAHNYASRPNCFRCGAFKSVYPGDYG+YM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF

A0A5D3E0T0 Zinc finger Ran-binding domain-containing protein 2-like isoform X35.6e-8297.06Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI
        MSWSAGDWICNVCQNVNFKKREACHRC YPKYGGPDPSTYSYNKTEALAGDWYCTT+SCGAHNYASRPNCFRCGAFKSVYPGDYG+YM+GSDQYGSDASI
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASI

Query:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
        PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
Subjt:  PPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF

SwissProt top hitse value%identityAlignment
O13801 Uncharacterized RNA-binding protein C17H9.04c1.9e-0726.15Show/hide
Query:  GDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYN-KTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASIPPGW
        GDW C +C   NF++R +C RC++P       +T S     +   G+ Y    S    NY    +       +S      G+  +              +
Subjt:  GDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYN-KTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASIPPGW

Query:  KSGDWICPRMGCGVHNYASRMECFKCKTPR
        ++GDW C   GCG HN+A  + C +C   R
Subjt:  KSGDWICPRMGCGVHNYASRMECFKCKTPR

O95218 Zinc finger Ran-binding domain-containing protein 29.0e-0534.48Show/hide
Query:  GDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+    +      G  + G   A    G + + DW C    C   N+A R EC  C TP+
Subjt:  GDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Q19QU3 Zinc finger Ran-binding domain-containing protein 29.0e-0534.48Show/hide
Query:  GDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+    +      G  + G   A    G + + DW C    C   N+A R EC  C TP+
Subjt:  GDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Q5ZLX5 Zinc finger Ran-binding domain-containing protein 21.8e-0535.63Show/hide
Query:  GDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+    +      G  + G   A    G + + DW C    CG  N+A R EC  C TP+
Subjt:  GDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Q9R020 Zinc finger Ran-binding domain-containing protein 29.0e-0534.48Show/hide
Query:  GDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR
        GDW C    CG  N+A R +C RCG  K+    +      G  + G   A    G + + DW C    C   N+A R EC  C TP+
Subjt:  GDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSD-ASIPPG-WKSGDWICPRMGCGVHNYASRMECFKCKTPR

Arabidopsis top hitse value%identityAlignment
AT1G70650.1 Ran BP2/NZF zinc finger-like superfamily protein3.5e-0427.71Show/hide
Query:  GDWICNVCQNVNFKKREACHRC-AYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRC---GAFKSVYPGDY
        GDW C  C+ +NF K   C RC  + +           +      GDW C T  C   N++    C RC      + + PG++
Subjt:  GDWICNVCQNVNFKKREACHRC-AYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRC---GAFKSVYPGDY

AT2G17975.1 zinc finger (Ran-binding) family protein4.3e-1835.57Show/hide
Query:  GDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSV-------YPG----------------
        GDW C  C+N N+  R  C+RC  P+    D +T   +K     GDW CT   C  +NYASR  C +CG  K V        PG                
Subjt:  GDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSV-------YPG----------------

Query:  -DYGSYMIGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKC
         D    ++      + AS+   W+SGDWIC    CG HNY+SR++C KC
Subjt:  -DYGSYMIGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKC

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein1.5e-5563.04Show/hide
Query:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGD-YGSYMIGSDQYGSD-A
        MSW+ GDW+C  CQ+ NFKKRE+C +C YPK+GG D STY YN+TE +AGDWYC  ++CG+HNYASR +C+RCG  K  Y    YG+ M+    YG+D A
Subjt:  MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGD-YGSYMIGSDQYGSD-A

Query:  SIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF
        + PPGWK+GDW+CPR+GCGVHNYASR ECFKCKT RD+
Subjt:  SIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRDF

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein1.4e-3241.67Show/hide
Query:  GDWICNVCQNVNFKKREACHRCA-------------YPKYGGPDPSTYSYNK-TEALAGDWYCTTISCGAHNYASRPNCFRCGAFK-SVYPGDYGSYMIG
        GDW C  C ++NF++R++C RC              +  +GG   S + +   ++   GDWYCT  +CG HN+ASR  CF+CG FK     G  G  + G
Subjt:  GDWICNVCQNVNFKKREACHRCA-------------YPKYGGPDPSTYSYNK-TEALAGDWYCTTISCGAHNYASRPNCFRCGAFK-SVYPGDYGSYMIG

Query:  SDQYGSD--ASIPPG------WKSGDWICPRMGCGVHNYASRMECFKCKTPRDFDS
           + +D   S  PG      WKSGDWIC R+GC  HN+ASRMECF+C  PRDF +
Subjt:  SDQYGSD--ASIPPG------WKSGDWICPRMGCGVHNYASRMECFKCKTPRDFDS

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein1.3e-3037.11Show/hide
Query:  GDWICNVCQNVNFKKREACHRCAYPKYGG------------PDPSTYSYNK-TEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGD---------
        GDW C +C ++NF++R++C RC  P+ GG            P  S++ +N   +   GDWYC    CG HN+A+R +CF+CGA K  +            
Subjt:  GDWICNVCQNVNFKKREACHRCAYPKYGG------------PDPSTYSYNK-TEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGD---------

Query:  -------YGSYMIGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRD
                G +  G    G   +    WKSGDWICPR GC  HN+ASR ECF+C  P++
Subjt:  -------YGSYMIGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYASRMECFKCKTPRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTGGTCAGCAGGAGATTGGATATGCAACGTTTGCCAGAACGTAAACTTCAAAAAAAGAGAAGCATGCCATCGTTGTGCTTACCCCAAGTATGGAGGCCCAGACCC
TTCAACTTACAGTTACAACAAGACGGAGGCGTTGGCCGGAGACTGGTACTGCACCACCATCAGCTGCGGAGCTCACAATTATGCCAGCCGCCCCAACTGCTTTAGATGTG
GTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCTCCTACATGATCGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGATT
TGCCCTAGAATGGGATGCGGAGTACATAATTATGCAAGCAGGATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGATTCCAATCAACTTATCGTGGAAAATTTCTT
AGTTGAACTTGTTCCCCAAACACTTCACAAGAATAGATCCAAAATACACAGCCACCAAGACGATCTATCTCTACACGTATTTCAAAAGAACAAATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCTGGTCAGCAGGAGATTGGATATGCAACGTTTGCCAGAACGTAAACTTCAAAAAAAGAGAAGCATGCCATCGTTGTGCTTACCCCAAGTATGGAGGCCCAGACCC
TTCAACTTACAGTTACAACAAGACGGAGGCGTTGGCCGGAGACTGGTACTGCACCACCATCAGCTGCGGAGCTCACAATTATGCCAGCCGCCCCAACTGCTTTAGATGTG
GTGCATTTAAGTCCGTCTATCCTGGTGATTATGGCTCCTACATGATCGGTTCCGATCAGTATGGATCTGATGCAAGCATCCCACCTGGATGGAAATCTGGAGACTGGATT
TGCCCTAGAATGGGATGCGGAGTACATAATTATGCAAGCAGGATGGAGTGTTTTAAATGCAAAACACCAAGAGATTTCGATTCCAATCAACTTATCGTGGAAAATTTCTT
AGTTGAACTTGTTCCCCAAACACTTCACAAGAATAGATCCAAAATACACAGCCACCAAGACGATCTATCTCTACACGTATTTCAAAAGAACAAATTGTAG
Protein sequenceShow/hide protein sequence
MSWSAGDWICNVCQNVNFKKREACHRCAYPKYGGPDPSTYSYNKTEALAGDWYCTTISCGAHNYASRPNCFRCGAFKSVYPGDYGSYMIGSDQYGSDASIPPGWKSGDWI
CPRMGCGVHNYASRMECFKCKTPRDFDSNQLIVENFLVELVPQTLHKNRSKIHSHQDDLSLHVFQKNKL