CuGenDBv2

Gene ID	HG10008046
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Unknown protein
Genome location	Chr10:19073133..19073644
RNA-Seq Expression	HG10008046
Synteny	HG10008046
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8653101.1 hypothetical protein Csa_019555 [Cucumis sativus]

9.8e-52

84.4

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Query:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFSTPTLRSCISSETKKKKKKQ-NQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASS
        MSSMMNSQGMALATAMAAVSGTVILLSFCIQK+IPIHQFS+PTLRSC  SE+ KKKKKQ NQKKRVHFAKDVVDPIGNGEDFRRQHEIA+ +NNYS +SS
Subjt:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFSTPTLRSCISSETKKKKKKQ-NQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASS

Query:  PSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS
        P+Q PP+    AAADP MPANRVALYNGI+RDRVVHRY YS
Subjt:  PSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS

XP_004150585.1 uncharacterized protein LOC101222988 [Cucumis sativus]

9.8e-52

84.4

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Query:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFSTPTLRSCISSETKKKKKKQ-NQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASS
        MSSMMNSQGMALATAMAAVSGTVILLSFCIQK+IPIHQFS+PTLRSC  SE+ KKKKKQ NQKKRVHFAKDVVDPIGNGEDFRRQHEIA+ +NNYS +SS
Subjt:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFSTPTLRSCISSETKKKKKKQ-NQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASS

Query:  PSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS
        P+Q PP+    AAADP MPANRVALYNGI+RDRVVHRY YS
Subjt:  PSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS

XP_008443997.1 PREDICTED: uncharacterized protein LOC103487448 [Cucumis melo]

1.3e-51

84.4

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Query:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFSTPTLRSCISSETKKKKKKQ-NQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASS
        MSSMMNSQGMALATAMAAVSGTVILLSFCIQK+IPIHQFS PTLRSC  SE+ KKKKKQ N KKRVHFAKDVVDPIGNGEDFRRQHEIA+ NNNYS +SS
Subjt:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFSTPTLRSCISSETKKKKKKQ-NQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASS

Query:  PSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS
        P+Q PP+    AA DP MPANRVALYNGI+RDRVVHRYTYS
Subjt:  PSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS

XP_022933375.1 uncharacterized protein LOC111440802 [Cucurbita moschata]

3.7e-43

76.55

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Query:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQ---FSTPTLRSCISSET--KKKKKKQNQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYS
        MSSMMNSQGMALATAMAAVSGTVILLS+CIQKSIPIHQ   FS P LRSCI SET  KKKKKKQ+QKKRVHFAKDVVDPIGNGEDFRRQHEIA       
Subjt:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQ---FSTPTLRSCISSET--KKKKKKQNQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYS

Query:  TASSPSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS
         A+SP QK            GMPANR ALYN ILRDRVVHRYTYS
Subjt:  TASSPSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS

XP_038879742.1 uncharacterized protein LOC120071499 [Benincasa hispida]

3.0e-53

83.57

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Query:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFSTPTLRSCISSETKKKKKKQNQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASSP
        MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFS PTLRSCI S+T+KKKK    KKRVHFAKDVVDPIGNGEDFRR+HEIAWNNN  S++SS 
Subjt:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFSTPTLRSCISSETKKKKKKQNQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASSP

Query:  SQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS
        S  PP   +AAA DPGMPANRVALYNGILRDRVVHR+ YS
Subjt:  SQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWV6 Uncharacterized protein

4.7e-52

84.4

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Query:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFSTPTLRSCISSETKKKKKKQ-NQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASS
        MSSMMNSQGMALATAMAAVSGTVILLSFCIQK+IPIHQFS+PTLRSC  SE+ KKKKKQ NQKKRVHFAKDVVDPIGNGEDFRRQHEIA+ +NNYS +SS
Subjt:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFSTPTLRSCISSETKKKKKKQ-NQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASS

Query:  PSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS
        P+Q PP+    AAADP MPANRVALYNGI+RDRVVHRY YS
Subjt:  PSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS

A0A1S3B9B6 uncharacterized protein LOC103487448

6.2e-52

84.4

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Query:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFSTPTLRSCISSETKKKKKKQ-NQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASS
        MSSMMNSQGMALATAMAAVSGTVILLSFCIQK+IPIHQFS PTLRSC  SE+ KKKKKQ N KKRVHFAKDVVDPIGNGEDFRRQHEIA+ NNNYS +SS
Subjt:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFSTPTLRSCISSETKKKKKKQ-NQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASS

Query:  PSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS
        P+Q PP+    AA DP MPANRVALYNGI+RDRVVHRYTYS
Subjt:  PSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS

A0A5A7U994 Uncharacterized protein

6.2e-52

84.4

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Query:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFSTPTLRSCISSETKKKKKKQ-NQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASS
        MSSMMNSQGMALATAMAAVSGTVILLSFCIQK+IPIHQFS PTLRSC  SE+ KKKKKQ N KKRVHFAKDVVDPIGNGEDFRRQHEIA+ NNNYS +SS
Subjt:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFSTPTLRSCISSETKKKKKKQ-NQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASS

Query:  PSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS
        P+Q PP+    AA DP MPANRVALYNGI+RDRVVHRYTYS
Subjt:  PSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS

A0A6J1F4Q3 uncharacterized protein LOC111440802

1.8e-43

76.55

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Query:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQ---FSTPTLRSCISSET--KKKKKKQNQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYS
        MSSMMNSQGMALATAMAAVSGTVILLS+CIQKSIPIHQ   FS P LRSCI SET  KKKKKKQ+QKKRVHFAKDVVDPIGNGEDFRRQHEIA       
Subjt:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQ---FSTPTLRSCISSET--KKKKKKQNQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYS

Query:  TASSPSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS
         A+SP QK            GMPANR ALYN ILRDRVVHRYTYS
Subjt:  TASSPSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS

A0A6J1I8J7 uncharacterized protein LOC111470637

4.0e-43

75.86

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Query:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQ---FSTPTLRSCISSET--KKKKKKQNQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYS
        MSSMMNSQGMALATAMAAVSGTVI+LS+CIQKSIPIHQ   FS P LRSCI SET  KKKKKKQ+QKKRVHFAKDVVDPIGNGEDFRRQHEIA       
Subjt:  MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQ---FSTPTLRSCISSET--KKKKKKQNQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYS

Query:  TASSPSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS
         A+SP QK            GMPANR ALYN ILRDRVVHRYTYS
Subjt:  TASSPSQKPPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G52565.1 unknown protein

5.2e-11

40.94

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Query:  SQGMALATAMAAVSGTVILLSFCIQKSIPIHQFS-TPTLRSCISSETKKKKKKQNQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASSPSQKPP
        S G+ +ATAM   S T + L+  I +    +Q S    LRSC+SSE KKK++K N+KK+V FA++V +  GNGE++R++               P Q   
Subjt:  SQGMALATAMAAVSGTVILLSFCIQKSIPIHQFS-TPTLRSCISSETKKKKKKQNQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASSPSQKPP

Query:  SVTAAAAADPGMPANRVALYNGILRDR
             +     MPANR+ALYNGILRDR
Subjt:  SVTAAAAADPGMPANRVALYNGILRDR

AT3G15760.1 unknown protein

1.5e-10

40.88

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Query:  MALATAMAAVSGTVILLSFC------IQKSIPIHQFSTPTLRSCISSETKKKKKKQNQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASSPSQK
        + +ATAM   S T + L+         Q    + Q   P LRSC+SSE  KK+ K  + K+V FA +V D  GNGE++RR+        N  +   P  K
Subjt:  MALATAMAAVSGTVILLSFC------IQKSIPIHQFSTPTLRSCISSETKKKKKKQNQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASSPSQK

Query:  PPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS
         P  T +      MPANR+ALYNGILRDR  HR  YS
Subjt:  PPSVTAAAAADPGMPANRVALYNGILRDRVVHRYTYS

Sequences

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CDS sequence

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ATGTCTTCGATGATGAACTCACAAGGAATGGCTCTGGCTACAGCCATGGCTGCCGTCTCTGGCACTGTGATTCTTCTCTCTTTTTGCATCCAAAAATCTATTCCAATTCA
CCAATTCTCAACTCCAACTCTCCGCTCTTGTATTTCCTCTGAGACCAAGAAGAAAAAGAAGAAACAGAATCAGAAAAAAAGGGTTCACTTTGCAAAAGACGTTGTCGATC
CAATTGGGAACGGCGAGGATTTTCGAAGACAACACGAAATCGCTTGGAACAACAATAATTATTCCACCGCCTCTTCGCCGTCGCAAAAGCCCCCTTCCGTCACCGCCGCC
GCTGCCGCCGACCCAGGAATGCCGGCAAACAGAGTGGCACTCTACAACGGGATTTTGAGAGATCGTGTTGTTCATCGATACACTTACTCTAGTTGA

mRNA sequence

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Protein sequence

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MSSMMNSQGMALATAMAAVSGTVILLSFCIQKSIPIHQFSTPTLRSCISSETKKKKKKQNQKKRVHFAKDVVDPIGNGEDFRRQHEIAWNNNNYSTASSPSQKPPSVTAA
AAADPGMPANRVALYNGILRDRVVHRYTYSS

HG10008046 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome