; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008055 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008055
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionaxial regulator YABBY 5-like
Genome locationChr10:19160227..19163477
RNA-Seq ExpressionHG10008055
SyntenyHG10008055
Gene Ontology termsGO:0007275 - multicellular organism development (biological process)
InterPro domainsIPR006780 - YABBY protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587892.1 Axial regulator YABBY 5, partial [Cucurbita argyrosperma subsp. sororia]6.6e-3044.44Show/hide
Query:  ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLL-----------------HFSLF-----------------------------
        +SCIDIAPEQLCYIPCNFCNIVLA  V  + +       CG   ++W +                 +++L+                             
Subjt:  ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLL-----------------HFSLF-----------------------------

Query:  ---------------------LGKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAALLNK
                               +  +EEI+RIKA NPEISHREAFSTAAKNWAHFPRIHFGLM ETNNQVK+DDGSERLM+ AALLNK
Subjt:  ---------------------LGKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAALLNK

KAG7021777.1 Axial regulator YABBY 5 [Cucurbita argyrosperma subsp. argyrosperma]2.7e-3150.9Show/hide
Query:  ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLL-----------------HFSLF--LGKIFR---------------------
        +SCIDIAPEQLCYIPCNFCNIVLA  V  + +       CG   ++W +                 +++L+   G  F+                     
Subjt:  ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLL-----------------HFSLF--LGKIFR---------------------

Query:  -----EEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAALLNK
              EI+RIKA NPEISHREAFSTAAKNWAHFPRIHFGLM ETNNQVK+DDGSERLM+ AALLNK
Subjt:  -----EEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAALLNK

XP_004150030.1 axial regulator YABBY 5-like [Cucumis sativus]4.1e-3246.11Show/hide
Query:  MAASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLH-----------------FSLF---------------------------
        MA +C+DIAPEQLCYIPCNFCNIVLA  V  + +       CG   ++W ++                 ++L+                           
Subjt:  MAASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLH-----------------FSLF---------------------------

Query:  -------------------------LGKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAALLNK
                                   +  +EEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLM RAALLNK
Subjt:  -------------------------LGKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAALLNK

XP_022933458.1 axial regulator YABBY 5-like [Cucurbita moschata]6.6e-3044.44Show/hide
Query:  ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLL-----------------HFSLF-----------------------------
        +SCIDIAPEQLCYIPCNFCNIVLA  V  + +       CG   ++W +                 +++L+                             
Subjt:  ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLL-----------------HFSLF-----------------------------

Query:  ---------------------LGKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAALLNK
                               +  +EEI+RIKA NPEISHREAFSTAAKNWAHFPRIHFGLM ETNNQVK+DDGSERLM+ AALLNK
Subjt:  ---------------------LGKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAALLNK

XP_038878725.1 axial regulator YABBY 5-like [Benincasa hispida]4.4e-3450.26Show/hide
Query:  MAASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWL---------------------LHFSLFLG---------------------
        MAASCIDIAPEQLCYIPCNFCNIVLA  V  + +       CG   ++W                      L+ S F G                     
Subjt:  MAASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWL---------------------LHFSLFLG---------------------

Query:  -----------------------KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAALLNK
                               +  +EEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAA+LNK
Subjt:  -----------------------KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAALLNK

TrEMBL top hitse value%identityAlignment
A0A061GNW0 Plant-specific transcription factor YABBY family protein isoform 13.9e-2843.72Show/hide
Query:  ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL---------------------------------------------
        +SCID+APEQLCYIPCNFCNIVLA  V  + +       CG   ++W ++ +                                                
Subjt:  ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL---------------------------------------------

Query:  ---------------GKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSER-LMTRAALLNK
                        +  +EEIQRIKA+NP+ISHREAFSTAAKNWAHFP IHFGLMLETNNQ KLDD SE+ LM+R ALLNK
Subjt:  ---------------GKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSER-LMTRAALLNK

A0A6J0ZN21 axial regulator YABBY 5-like isoform X26.0e-2945.45Show/hide
Query:  ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL---------------------------------------------
        +SCID+APEQLCYIPCNFCNIVLA  V  + +       CG   ++W ++ +                                                
Subjt:  ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL---------------------------------------------

Query:  --------GKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSER-LMTRAALLNK
                 +  +EEIQRIKA+NP+ISHREAFSTAAKNWAHFP IHFGLMLETNNQ KLDD SE+ LM+R ALLNK
Subjt:  --------GKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSER-LMTRAALLNK

A0A6J0ZNM9 axial regulator YABBY 5-like isoform X13.9e-2843.72Show/hide
Query:  ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL---------------------------------------------
        +SCID+APEQLCYIPCNFCNIVLA  V  + +       CG   ++W ++ +                                                
Subjt:  ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL---------------------------------------------

Query:  ---------------GKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSER-LMTRAALLNK
                        +  +EEIQRIKA+NP+ISHREAFSTAAKNWAHFP IHFGLMLETNNQ KLDD SE+ LM+R ALLNK
Subjt:  ---------------GKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSER-LMTRAALLNK

A0A6J1F4T3 axial regulator YABBY 5-like3.2e-3044.44Show/hide
Query:  ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLL-----------------HFSLF-----------------------------
        +SCIDIAPEQLCYIPCNFCNIVLA  V  + +       CG   ++W +                 +++L+                             
Subjt:  ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLL-----------------HFSLF-----------------------------

Query:  ---------------------LGKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAALLNK
                               +  +EEI+RIKA NPEISHREAFSTAAKNWAHFPRIHFGLM ETNNQVK+DDGSERLM+ AALLNK
Subjt:  ---------------------LGKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAALLNK

A0A6J1KTI6 axial regulator YABBY 5-like4.1e-3044.21Show/hide
Query:  ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLL-----------------HFSLF-----------------------------
        +SCIDIAPEQLCYIPCNFCNIVLA  V  + +       CG   ++W +                 +++L+                             
Subjt:  ASCIDIAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLL-----------------HFSLF-----------------------------

Query:  ----------------------LGKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAALLNK
                                +  +EEIQRIKA NPEISHREAFSTAAKNWAHFPRIHFGLM ETNNQ K+DDGSERLM+ AALLNK
Subjt:  ----------------------LGKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAALLNK

SwissProt top hitse value%identityAlignment
A2X7Q3 Protein YABBY 41.4e-1458.46Show/hide
Query:  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLET--NNQVKLDDGSERLMTRAAL
        +  ++EIQRIKA NP+ISHREAFS AAKNWAHFP IHFGLM +       K  DGSE ++ + +L
Subjt:  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLET--NNQVKLDDGSERLMTRAAL

Q6H668 Protein YABBY 41.4e-1458.46Show/hide
Query:  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLET--NNQVKLDDGSERLMTRAAL
        +  ++EIQRIKA NP+ISHREAFS AAKNWAHFP IHFGLM +       K  DGSE ++ + +L
Subjt:  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLET--NNQVKLDDGSERLMTRAAL

Q8GW46 Axial regulator YABBY 57.5e-2137.97Show/hide
Query:  IAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL--------------------------------------------------
        +A EQLCYIPCNFCNI+LA +V  + +       CG   ++W ++ +  L                                                  
Subjt:  IAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL--------------------------------------------------

Query:  -------GKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKL
                +  +EEIQRIKA+NP+ISHREAFSTAAKNWAHFP IHFGLMLE+N Q K+
Subjt:  -------GKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKL

Q9XFB0 Putative axial regulator YABBY 22.8e-1572.22Show/hide
Query:  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGS
        +  +EEIQRIKA NPEISHREAFSTAAKNWAHFP IHFGL L+ N + K  D S
Subjt:  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGS

Q9XFB1 Axial regulator YABBY 35.2e-1457.81Show/hide
Query:  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLE----TNNQVKLDDGSERLMTR
        +  +EEIQRIKA NP+ISHREAFS AAKNWAHFP IHFGLM +        V+  +G + +M R
Subjt:  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLE----TNNQVKLDDGSERLMTR

Arabidopsis top hitse value%identityAlignment
AT1G08465.1 Plant-specific transcription factor YABBY family protein2.0e-1672.22Show/hide
Query:  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGS
        +  +EEIQRIKA NPEISHREAFSTAAKNWAHFP IHFGL L+ N + K  D S
Subjt:  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGS

AT2G26580.1 plant-specific transcription factor YABBY family protein5.4e-2237.97Show/hide
Query:  IAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL--------------------------------------------------
        +A EQLCYIPCNFCNI+LA +V  + +       CG   ++W ++ +  L                                                  
Subjt:  IAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL--------------------------------------------------

Query:  -------GKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKL
                +  +EEIQRIKA+NP+ISHREAFSTAAKNWAHFP IHFGLMLE+N Q K+
Subjt:  -------GKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKL

AT2G26580.2 plant-specific transcription factor YABBY family protein5.4e-2237.97Show/hide
Query:  IAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL--------------------------------------------------
        +A EQLCYIPCNFCNI+LA +V  + +       CG   ++W ++ +  L                                                  
Subjt:  IAPEQLCYIPCNFCNIVLASDVGTAQI-------CG--PSIWLLHFSLFL--------------------------------------------------

Query:  -------GKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKL
                +  +EEIQRIKA+NP+ISHREAFSTAAKNWAHFP IHFGLMLE+N Q K+
Subjt:  -------GKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKL

AT4G00180.1 Plant-specific transcription factor YABBY family protein3.7e-1557.81Show/hide
Query:  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLE----TNNQVKLDDGSERLMTR
        +  +EEIQRIKA NP+ISHREAFS AAKNWAHFP IHFGLM +        V+  +G + +M R
Subjt:  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLE----TNNQVKLDDGSERLMTR

AT4G00180.2 Plant-specific transcription factor YABBY family protein3.7e-1557.81Show/hide
Query:  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLE----TNNQVKLDDGSERLMTR
        +  +EEIQRIKA NP+ISHREAFS AAKNWAHFP IHFGLM +        V+  +G + +M R
Subjt:  KIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLE----TNNQVKLDDGSERLMTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCCAGCTGCATCGATATTGCACCTGAACAACTCTGCTACATCCCTTGCAATTTTTGCAATATTGTTCTTGCGTCCGATGTGGGCACTGCACAAATCTGTGGTCC
GTCAATATGGCTGCTGCATTTCAGTCTCTTTCTTGGCAAGATCTTCAGAGAGGAAATTCAAAGGATCAAGGCAAGTAATCCTGAGATTAGCCACAGGGAAGCTTTCAGTA
CGGCAGCCAAAAACTGGGCACACTTTCCTCGTATTCACTTTGGTCTGATGTTGGAAACCAACAATCAAGTGAAGCTAGATGATGGTTCTGAGCGTTTAATGACAAGGGCT
GCACTATTAAACAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCCAGCTGCATCGATATTGCACCTGAACAACTCTGCTACATCCCTTGCAATTTTTGCAATATTGTTCTTGCGTCCGATGTGGGCACTGCACAAATCTGTGGTCC
GTCAATATGGCTGCTGCATTTCAGTCTCTTTCTTGGCAAGATCTTCAGAGAGGAAATTCAAAGGATCAAGGCAAGTAATCCTGAGATTAGCCACAGGGAAGCTTTCAGTA
CGGCAGCCAAAAACTGGGCACACTTTCCTCGTATTCACTTTGGTCTGATGTTGGAAACCAACAATCAAGTGAAGCTAGATGATGGTTCTGAGCGTTTAATGACAAGGGCT
GCACTATTAAACAAATGA
Protein sequenceShow/hide protein sequence
MAASCIDIAPEQLCYIPCNFCNIVLASDVGTAQICGPSIWLLHFSLFLGKIFREEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRA
ALLNK