; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008095 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008095
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING-type domain-containing protein
Genome locationChr10:19664690..19666949
RNA-Seq ExpressionHG10008095
SyntenyHG10008095
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR027370 - RING-type zinc-finger, LisH dimerisation motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK06338.1 uncharacterized protein E5676_scaffold163G00020 [Cucumis melo var. makuwa]3.5e-10390.69Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIE
        MGKRKRGSDQTHHDPPLHLSG+VPFSNQ DVRSEED  LARP+FMKRSRH YSHQYCRRGSTSQANASTS ENRVRTVLEERPAFK  AHCNSEFPD IE
Subjt:  MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIE

Query:  SIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSKG
        SIESTF GPERIR+NSLGKDAISSH +RMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDRSDPPCPLC + PP+VDDSKG
Subjt:  SIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSKG

Query:  GEQE
        GEQE
Subjt:  GEQE

XP_008443927.1 PREDICTED: uncharacterized protein LOC103487402 isoform X2 [Cucumis melo]1.2e-10391.18Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIE
        MGKRKRGSDQTHHDPPLHLSG+VPFSNQ DVRSEED  LARP+FMKRSRH YSHQYCRRGSTSQANASTS ENRVRTVLEERPAFK  AHCNSEFPD IE
Subjt:  MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIE

Query:  SIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSKG
        SIESTF GPERIR+NSLGKDAISSH MRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDRSDPPCPLC + PP+VDDSKG
Subjt:  SIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSKG

Query:  GEQE
        GEQE
Subjt:  GEQE

XP_022134599.1 uncharacterized protein LOC111006826 [Momordica charantia]1.8e-9987.68Show/hide
Query:  MGKRKR-GSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHI
        MGKRKR  SD TH DPPLHLSG+VPFSNQMDV SEED+ LARPVFMKRSRHQYSHQYCRRGSTSQANASTS ENRVRTVLEERPAFK  AHCNSEFP+HI
Subjt:  MGKRKR-GSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHI

Query:  ESIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSK
        ESIE+TFWGPERIR++SLGKDAISSHG+RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLE RS VEDRSDPPCPLC EP  K+DDSK
Subjt:  ESIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSK

Query:  GGE
        GG+
Subjt:  GGE

XP_038878631.1 uncharacterized protein LOC120070818 isoform X1 [Benincasa hispida]4.0e-10792.68Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEE-DRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHI
        MGKRKRGSDQTHHDPPLHLSG+VPFSNQMDVRSEE DR  ARPVFMKRSRHQYSHQYCRRGSTS ANAS S ENRV+TVLEERPAFK  AHCNSEFPDHI
Subjt:  MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEE-DRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHI

Query:  ESIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSK
        ESIE TFWGPERIR+NS GKDA SSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPP+VDDSK
Subjt:  ESIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSK

Query:  GGEQE
        GGEQE
Subjt:  GGEQE

XP_038878632.1 uncharacterized protein LOC120070818 isoform X2 [Benincasa hispida]1.6e-10893.14Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIE
        MGKRKRGSDQTHHDPPLHLSG+VPFSNQMDVRSEEDR  ARPVFMKRSRHQYSHQYCRRGSTS ANAS S ENRV+TVLEERPAFK  AHCNSEFPDHIE
Subjt:  MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIE

Query:  SIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSKG
        SIE TFWGPERIR+NS GKDA SSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPP+VDDSKG
Subjt:  SIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSKG

Query:  GEQE
        GEQE
Subjt:  GEQE

TrEMBL top hitse value%identityAlignment
A0A0A0LT71 RING-type domain-containing protein2.0e-9987.75Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIE
        MGKRKRGSDQTHHDPPLHLSG+VPFSNQ DVRSEED  LARP+FMKRSRH +SHQYC RGSTSQANAS S ENRVRTVLEERPAFK  AH NSEFPD IE
Subjt:  MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIE

Query:  SIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSKG
        SIESTF  PERIR+NSLGKDA SSH MRM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDRSDPPCPLC +PPP+VDDSK 
Subjt:  SIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSKG

Query:  GEQE
        GEQE
Subjt:  GEQE

A0A1S3B956 uncharacterized protein LOC103487402 isoform X25.9e-10491.18Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIE
        MGKRKRGSDQTHHDPPLHLSG+VPFSNQ DVRSEED  LARP+FMKRSRH YSHQYCRRGSTSQANASTS ENRVRTVLEERPAFK  AHCNSEFPD IE
Subjt:  MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIE

Query:  SIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSKG
        SIESTF GPERIR+NSLGKDAISSH MRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDRSDPPCPLC + PP+VDDSKG
Subjt:  SIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSKG

Query:  GEQE
        GEQE
Subjt:  GEQE

A0A5A7U906 RING-type domain-containing protein5.9e-10491.18Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIE
        MGKRKRGSDQTHHDPPLHLSG+VPFSNQ DVRSEED  LARP+FMKRSRH YSHQYCRRGSTSQANASTS ENRVRTVLEERPAFK  AHCNSEFPD IE
Subjt:  MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIE

Query:  SIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSKG
        SIESTF GPERIR+NSLGKDAISSH MRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDRSDPPCPLC + PP+VDDSKG
Subjt:  SIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSKG

Query:  GEQE
        GEQE
Subjt:  GEQE

A0A5D3C5B4 RING-type domain-containing protein1.7e-10390.69Show/hide
Query:  MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIE
        MGKRKRGSDQTHHDPPLHLSG+VPFSNQ DVRSEED  LARP+FMKRSRH YSHQYCRRGSTSQANASTS ENRVRTVLEERPAFK  AHCNSEFPD IE
Subjt:  MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIE

Query:  SIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSKG
        SIESTF GPERIR+NSLGKDAISSH +RMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRS+VEDRSDPPCPLC + PP+VDDSKG
Subjt:  SIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSKG

Query:  GEQE
        GEQE
Subjt:  GEQE

A0A6J1BZ68 uncharacterized protein LOC1110068268.8e-10087.68Show/hide
Query:  MGKRKR-GSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHI
        MGKRKR  SD TH DPPLHLSG+VPFSNQMDV SEED+ LARPVFMKRSRHQYSHQYCRRGSTSQANASTS ENRVRTVLEERPAFK  AHCNSEFP+HI
Subjt:  MGKRKR-GSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHI

Query:  ESIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSK
        ESIE+TFWGPERIR++SLGKDAISSHG+RM+CGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHA+CLE RS VEDRSDPPCPLC EP  K+DDSK
Subjt:  ESIESTFWGPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSK

Query:  GGE
        GG+
Subjt:  GGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19680.1 RING/U-box superfamily protein2.0e-1137.35Show/hide
Query:  GPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCME
        G  R+   S  + + S    +  CG C KL+  +     + ++  +LP+ AVL CGHVYHA CLE  +N  ++ DP CP+C E
Subjt:  GPERIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCME

AT1G75400.1 RING/U-box superfamily protein3.1e-1247.54Show/hide
Query:  RMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLC
        + VCG C KL+  +     +++++ ELP+AAVL CGHVYHAECLE  +   ++ DP CP+C
Subjt:  RMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLC

AT4G39140.1 RING/U-box superfamily protein2.6e-1141.77Show/hide
Query:  LGKDAISSHGMRM------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLC
        L +D I  HG RM       CG C + L  + L        ++EL V+A+L CGHVYH ECLE  +   D+ DP CP+C
Subjt:  LGKDAISSHGMRM------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLC

AT4G39140.2 RING/U-box superfamily protein2.6e-1141.77Show/hide
Query:  LGKDAISSHGMRM------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLC
        L +D I  HG RM       CG C + L  + L        ++EL V+A+L CGHVYH ECLE  +   D+ DP CP+C
Subjt:  LGKDAISSHGMRM------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLC

AT4G39140.3 RING/U-box superfamily protein2.6e-1141.77Show/hide
Query:  LGKDAISSHGMRM------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLC
        L +D I  HG RM       CG C + L  + L        ++EL V+A+L CGHVYH ECLE  +   D+ DP CP+C
Subjt:  LGKDAISSHGMRM------VCGICQK-LMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGCGCAAGCGAGGCTCTGATCAGACCCACCACGATCCTCCTCTTCATCTTTCCGGTATAGTTCCCTTTTCCAATCAAATGGATGTGCGGTCAGAAGAGGATCG
GGGTCTTGCTCGTCCAGTATTCATGAAACGTTCACGTCATCAGTATAGCCATCAGTATTGTCGGCGAGGTTCAACCAGTCAAGCAAATGCATCTACGTCTCATGAAAACC
GTGTCAGAACCGTACTTGAAGAACGACCCGCTTTTAAACTTGGTGCTCATTGCAACTCAGAGTTTCCAGACCATATAGAAAGCATTGAGAGCACCTTTTGGGGGCCAGAA
AGGATAAGGTTCAATTCCTTGGGGAAGGATGCAATTTCATCTCATGGAATGAGAATGGTATGTGGAATTTGTCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTCGGCAA
CACACTTTCTTCCAGCGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCGAATGTCGAAGATAGAAGCGATCCAC
CTTGTCCATTGTGCATGGAACCGCCTCCCAAAGTCGACGATTCAAAAGGAGGAGAACAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGCGCAAGCGAGGCTCTGATCAGACCCACCACGATCCTCCTCTTCATCTTTCCGGTATAGTTCCCTTTTCCAATCAAATGGATGTGCGGTCAGAAGAGGATCG
GGGTCTTGCTCGTCCAGTATTCATGAAACGTTCACGTCATCAGTATAGCCATCAGTATTGTCGGCGAGGTTCAACCAGTCAAGCAAATGCATCTACGTCTCATGAAAACC
GTGTCAGAACCGTACTTGAAGAACGACCCGCTTTTAAACTTGGTGCTCATTGCAACTCAGAGTTTCCAGACCATATAGAAAGCATTGAGAGCACCTTTTGGGGGCCAGAA
AGGATAAGGTTCAATTCCTTGGGGAAGGATGCAATTTCATCTCATGGAATGAGAATGGTATGTGGAATTTGTCAGAAGCTGATGAGACGAAAGCTTTGCTTTCTCGGCAA
CACACTTTCTTCCAGCGAACTTCCCGTTGCTGCGGTTTTAGTTTGTGGCCATGTCTATCATGCAGAATGTCTGGAGAACAGGTCGAATGTCGAAGATAGAAGCGATCCAC
CTTGTCCATTGTGCATGGAACCGCCTCCCAAAGTCGACGATTCAAAAGGAGGAGAACAGGAATGA
Protein sequenceShow/hide protein sequence
MGKRKRGSDQTHHDPPLHLSGIVPFSNQMDVRSEEDRGLARPVFMKRSRHQYSHQYCRRGSTSQANASTSHENRVRTVLEERPAFKLGAHCNSEFPDHIESIESTFWGPE
RIRFNSLGKDAISSHGMRMVCGICQKLMRRKLCFLGNTLSSSELPVAAVLVCGHVYHAECLENRSNVEDRSDPPCPLCMEPPPKVDDSKGGEQE