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HG10008105 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008105
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr10:19819678..19820001
RNA-Seq ExpressionHG10008105
SyntenyHG10008105
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050069.1 hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa]4.2e-3170.37Show/hide
Query:  MTVKSLNTFTMKFALVILVCIIILAPSTT-ARTVAATPGLSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMD
        M  +SLN   MK  LV LVCI ILAPSTT A T AA P  SV QN  FL CAPFIL+A LCV DVIKFPIAPHP CCKAI KL+DCAPEI++KIP  DMD
Subjt:  MTVKSLNTFTMKFALVILVCIIILAPSTT-ARTVAATPGLSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMD

Query:  IIKKICAL
        +IKKIC+L
Subjt:  IIKKICAL

KAA0050072.1 hypothetical protein E6C27_scaffold675G00540 [Cucumis melo var. makuwa]1.6e-2563.89Show/hide
Query:  MTVKSLNTFTMKFALVILVCIIILAPSTTA-RTVAATP-GLSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDM
        M VKSL    +K A V +V I ILA S TA RTV++T    S+ QNLSF SCAPFI D  LC+VDV KFPI+PHP CCKAIFKL+DCAP +F+ IP  DM
Subjt:  MTVKSLNTFTMKFALVILVCIIILAPSTTA-RTVAATP-GLSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDM

Query:  DIIKKICA
        D+IKKICA
Subjt:  DIIKKICA

KAE8653020.1 hypothetical protein Csa_004576, partial [Cucumis sativus]1.3e-2465.05Show/hide
Query:  MTVKSLNTFTMKFALVILVCIIILAPSTTA-RTVAATPGL--SVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTD
        M VKSL    MK ALV +V I ILA S TA RTV ++  L  S+ Q+LSF SC PFILDA LC+VDV KFPIAPHPFCCKAIFKL+DCAP +F+ IP  D
Subjt:  MTVKSLNTFTMKFALVILVCIIILAPSTTA-RTVAATPGL--SVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTD

Query:  MDI
        MD+
Subjt:  MDI

KAE8653023.1 hypothetical protein Csa_023561, partial [Cucumis sativus]3.7e-2765.42Show/hide
Query:  KSLNTFTMKFALVILVCIIILAPSTTA-RTVAATPGL--SVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDI
        KSL    MK ALV +V I ILA S TA RTV ++  L  S+ Q+LSF SC PFILDA LC+VDV KFPIAPHPFCCKAIFKL+DCAP +F+ IP  DMD+
Subjt:  KSLNTFTMKFALVILVCIIILAPSTTA-RTVAATPGL--SVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDI

Query:  IKKICAL
        +K ICAL
Subjt:  IKKICAL

TYK10334.1 hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa]4.8e-2769.39Show/hide
Query:  MKFALVILVCIIILAPSTT-ARTVAATPGLSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKKICAL
        MK  LV LVCI ILAPSTT A T AA P  SV QN  FL CAPFIL+A LCV  VIKFPIAPHP CCKAI KL DCAP+I++KIP +DM++IKK C+L
Subjt:  MKFALVILVCIIILAPSTT-ARTVAATPGLSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKKICAL

TrEMBL top hitse value%identityAlignment
A0A5A7U2L3 Uncharacterized protein7.5e-2663.89Show/hide
Query:  MTVKSLNTFTMKFALVILVCIIILAPSTTA-RTVAATP-GLSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDM
        M VKSL    +K A V +V I ILA S TA RTV++T    S+ QNLSF SCAPFI D  LC+VDV KFPI+PHP CCKAIFKL+DCAP +F+ IP  DM
Subjt:  MTVKSLNTFTMKFALVILVCIIILAPSTTA-RTVAATP-GLSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDM

Query:  DIIKKICA
        D+IKKICA
Subjt:  DIIKKICA

A0A5A7U475 Uncharacterized protein1.9e-2458.65Show/hide
Query:  KSLNTFTMKFALVILVCIIILAPSTTARTVAATPGLSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKK
        + ++TF MK +L  LV + ILAPS TA TVAA P     ++LSF +C PFILDA +CVV VIKFP+APHP CCKAI  L+DC+PE+++ IP   MD+IKK
Subjt:  KSLNTFTMKFALVILVCIIILAPSTTARTVAATPGLSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKK

Query:  ICAL
        IC+L
Subjt:  ICAL

A0A5A7U9A1 Uncharacterized protein2.0e-3170.37Show/hide
Query:  MTVKSLNTFTMKFALVILVCIIILAPSTT-ARTVAATPGLSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMD
        M  +SLN   MK  LV LVCI ILAPSTT A T AA P  SV QN  FL CAPFIL+A LCV DVIKFPIAPHP CCKAI KL+DCAPEI++KIP  DMD
Subjt:  MTVKSLNTFTMKFALVILVCIIILAPSTT-ARTVAATPGLSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMD

Query:  IIKKICAL
        +IKKIC+L
Subjt:  IIKKICAL

A0A5D3CGK9 Uncharacterized protein2.3e-2769.39Show/hide
Query:  MKFALVILVCIIILAPSTT-ARTVAATPGLSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKKICAL
        MK  LV LVCI ILAPSTT A T AA P  SV QN  FL CAPFIL+A LCV  VIKFPIAPHP CCKAI KL DCAP+I++KIP +DM++IKK C+L
Subjt:  MKFALVILVCIIILAPSTT-ARTVAATPGLSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKKICAL

A0A5D3CGL7 Uncharacterized protein2.4e-2458.88Show/hide
Query:  KSLNTFTMKFALVILVCIIILAPSTTARTVAATPG---LSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDI
        KS +  T++ ALV LVCI+ILAPS TA T+A  P    + + Q+ SF +CAPFIL+A +C+VDVIK P+APHP CCKAI  L+DCAPEI++ IP   MD+
Subjt:  KSLNTFTMKFALVILVCIIILAPSTTARTVAATPG---LSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDI

Query:  IKKICAL
        IKKIC L
Subjt:  IKKICAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGTCAAGTCACTGAACACATTTACAATGAAGTTCGCACTAGTAATTCTTGTTTGCATAATCATTTTAGCACCATCGACAACAGCCCGCACGGTGGCGGCAACACC
GGGTCTATCAGTACAACAAAATCTCTCTTTCTTAAGTTGTGCCCCATTTATTTTGGATGCTGCATTGTGTGTGGTCGATGTGATCAAGTTTCCAATTGCTCCTCATCCTT
TTTGTTGCAAAGCCATTTTTAAGCTAGATGATTGTGCTCCCGAAATTTTCGAAAAGATTCCTCTTACTGACATGGATATAATTAAGAAGATTTGTGCTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGGTCAAGTCACTGAACACATTTACAATGAAGTTCGCACTAGTAATTCTTGTTTGCATAATCATTTTAGCACCATCGACAACAGCCCGCACGGTGGCGGCAACACC
GGGTCTATCAGTACAACAAAATCTCTCTTTCTTAAGTTGTGCCCCATTTATTTTGGATGCTGCATTGTGTGTGGTCGATGTGATCAAGTTTCCAATTGCTCCTCATCCTT
TTTGTTGCAAAGCCATTTTTAAGCTAGATGATTGTGCTCCCGAAATTTTCGAAAAGATTCCTCTTACTGACATGGATATAATTAAGAAGATTTGTGCTTTGTAA
Protein sequenceShow/hide protein sequence
MTVKSLNTFTMKFALVILVCIIILAPSTTARTVAATPGLSVQQNLSFLSCAPFILDAALCVVDVIKFPIAPHPFCCKAIFKLDDCAPEIFEKIPLTDMDIIKKICAL