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HG10008106 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008106
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr10:19897079..19897402
RNA-Seq ExpressionHG10008106
SyntenyHG10008106
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050069.1 hypothetical protein E6C27_scaffold675G00500 [Cucumis melo var. makuwa]1.8e-2966.67Show/hide
Query:  MAVKSPNASTMKLARVILVCVAILAPSAT-ARTVAVTSGPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADMD
        MA +S N S MKL  V LVC+AILAPS T A T A    P+V QN  FL CAPFIL+A LC+ DVIKFPIAPHP CCKAI KL DCAP I++KIP  DMD
Subjt:  MAVKSPNASTMKLARVILVCVAILAPSAT-ARTVAVTSGPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADMD

Query:  IIKKICAL
        +IKKIC+L
Subjt:  IIKKICAL

KAA0050072.1 hypothetical protein E6C27_scaffold675G00540 [Cucumis melo var. makuwa]3.0e-2966.67Show/hide
Query:  MAVKSPNASTMKLARVILVCVAILAPSATA-RTVAVTS-GPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADM
        MAVKS  AS +K A V +V +AILA S TA RTV+ T+  P++ QNL F SCAPFI D  LC+VDV KFPI+PHP CCKAIFKL DCAP +F+ IPPADM
Subjt:  MAVKSPNASTMKLARVILVCVAILAPSATA-RTVAVTS-GPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADM

Query:  DIIKKICA
        D+IKKICA
Subjt:  DIIKKICA

KAE8653020.1 hypothetical protein Csa_004576, partial [Cucumis sativus]3.7e-2767.96Show/hide
Query:  MAVKSPNASTMKLARVILVCVAILAPSATA-RTV--AVTSGPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPAD
        MAVKS  AS MKLA V +V +AILA SATA RTV  + T  P++ Q+L F SC PFILDA LC+VDV KFPIAPHPFCCKAIFKL DCAP +F+ IP AD
Subjt:  MAVKSPNASTMKLARVILVCVAILAPSATA-RTV--AVTSGPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPAD

Query:  MDI
        MD+
Subjt:  MDI

KAE8653023.1 hypothetical protein Csa_023561, partial [Cucumis sativus]3.0e-2967.29Show/hide
Query:  KSPNASTMKLARVILVCVAILAPSATA-RTV--AVTSGPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADMDI
        KS  AS MKLA V +V +AILA SATA RTV  + T  P++ Q+L F SC PFILDA LC+VDV KFPIAPHPFCCKAIFKL DCAP +F+ IP ADMD+
Subjt:  KSPNASTMKLARVILVCVAILAPSATA-RTV--AVTSGPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADMDI

Query:  IKKICAL
        +K ICAL
Subjt:  IKKICAL

TYK10334.1 hypothetical protein E5676_scaffold367G00080 [Cucumis melo var. makuwa]3.5e-2565.31Show/hide
Query:  MKLARVILVCVAILAPSAT-ARTVAVTSGPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADMDIIKKICAL
        MKL  V LVC+AILAPS T A T A    P+V QN  FL CAPFIL+A LC+  VIKFPIAPHP CCKAI KL DCAP I++KIP +DM++IKK C+L
Subjt:  MKLARVILVCVAILAPSAT-ARTVAVTSGPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADMDIIKKICAL

TrEMBL top hitse value%identityAlignment
A0A5A7U2L3 Uncharacterized protein1.5e-2966.67Show/hide
Query:  MAVKSPNASTMKLARVILVCVAILAPSATA-RTVAVTS-GPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADM
        MAVKS  AS +K A V +V +AILA S TA RTV+ T+  P++ QNL F SCAPFI D  LC+VDV KFPI+PHP CCKAIFKL DCAP +F+ IPPADM
Subjt:  MAVKSPNASTMKLARVILVCVAILAPSATA-RTVAVTS-GPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADM

Query:  DIIKKICA
        D+IKKICA
Subjt:  DIIKKICA

A0A5A7U4A7 Uncharacterized protein5.4e-2458.72Show/hide
Query:  AVKSPNASTMKLARVILVCVAILAPSATARTVAVTSGP---TVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADM
        A KS +AST++LA V LVC+ ILAPS TA T+A    P    + Q+  F +CAPFIL+A +CMVDVIK P+APHP CCKAI  L DCAP I+  IP   M
Subjt:  AVKSPNASTMKLARVILVCVAILAPSATARTVAVTSGP---TVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADM

Query:  DIIKKICAL
        D+IKKIC L
Subjt:  DIIKKICAL

A0A5A7U9A1 Uncharacterized protein8.6e-3066.67Show/hide
Query:  MAVKSPNASTMKLARVILVCVAILAPSAT-ARTVAVTSGPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADMD
        MA +S N S MKL  V LVC+AILAPS T A T A    P+V QN  FL CAPFIL+A LC+ DVIKFPIAPHP CCKAI KL DCAP I++KIP  DMD
Subjt:  MAVKSPNASTMKLARVILVCVAILAPSAT-ARTVAVTSGPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADMD

Query:  IIKKICAL
        +IKKIC+L
Subjt:  IIKKICAL

A0A5D3CGK9 Uncharacterized protein1.7e-2565.31Show/hide
Query:  MKLARVILVCVAILAPSAT-ARTVAVTSGPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADMDIIKKICAL
        MKL  V LVC+AILAPS T A T A    P+V QN  FL CAPFIL+A LC+  VIKFPIAPHP CCKAI KL DCAP I++KIP +DM++IKK C+L
Subjt:  MKLARVILVCVAILAPSAT-ARTVAVTSGPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADMDIIKKICAL

A0A5D3CGL7 Uncharacterized protein3.2e-2458.72Show/hide
Query:  AVKSPNASTMKLARVILVCVAILAPSATARTVAVTSGP---TVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADM
        A KS +AST++LA V LVC+ ILAPS TA T+A    P    + Q+  F +CAPFIL+A +CMVDVIK P+APHP CCKAI  L DCAP I++ IP   M
Subjt:  AVKSPNASTMKLARVILVCVAILAPSATARTVAVTSGP---TVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADM

Query:  DIIKKICAL
        D+IKKIC L
Subjt:  DIIKKICAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTCAAGTCACCCAACGCATCCACAATGAAGTTAGCACGAGTAATTCTTGTTTGCGTAGCCATTTTAGCACCATCGGCGACAGCACGCACAGTAGCGGTAACGTC
CGGTCCAACAGTACAACAAAATCTCTTTTTCTTAAGTTGTGCTCCATTTATTTTGGATGCAGCATTGTGTATGGTCGATGTGATTAAATTTCCAATTGCTCCTCATCCTT
TTTGTTGCAAAGCCATTTTTAAGCTCGGTGATTGTGCTCCTGCAATATTCGAAAAGATTCCTCCTGCTGACATGGATATAATTAAGAAGATTTGTGCTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTCAAGTCACCCAACGCATCCACAATGAAGTTAGCACGAGTAATTCTTGTTTGCGTAGCCATTTTAGCACCATCGGCGACAGCACGCACAGTAGCGGTAACGTC
CGGTCCAACAGTACAACAAAATCTCTTTTTCTTAAGTTGTGCTCCATTTATTTTGGATGCAGCATTGTGTATGGTCGATGTGATTAAATTTCCAATTGCTCCTCATCCTT
TTTGTTGCAAAGCCATTTTTAAGCTCGGTGATTGTGCTCCTGCAATATTCGAAAAGATTCCTCCTGCTGACATGGATATAATTAAGAAGATTTGTGCTTTGTAA
Protein sequenceShow/hide protein sequence
MAVKSPNASTMKLARVILVCVAILAPSATARTVAVTSGPTVQQNLFFLSCAPFILDAALCMVDVIKFPIAPHPFCCKAIFKLGDCAPAIFEKIPPADMDIIKKICAL