CuGenDBv2

Gene ID	HG10008124
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Eukaryotic translation initiation factor 6
Genome location	Chr10:20040225..20044133
RNA-Seq Expression	HG10008124
Synteny	HG10008124
Gene Ontology terms	GO:0000054 - ribosomal subunit export from nucleus (biological process) GO:0000460 - maturation of 5.8S rRNA (biological process) GO:0000470 - maturation of LSU-rRNA (biological process) GO:0006413 - translational initiation (biological process) GO:0042256 - mature ribosome assembly (biological process) GO:1902626 - assembly of large subunit precursor of preribosome (biological process) GO:0005730 - nucleolus (cellular component) GO:0005829 - cytosol (cellular component) GO:0030687 - preribosome, large subunit precursor (cellular component) GO:0003743 - translation initiation factor activity (molecular function) GO:0043022 - ribosome binding (molecular function) GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domains	IPR002769 - Translation initiation factor IF6

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022147757.1 eukaryotic translation initiation factor 6-2 [Momordica charantia]

3.6e-115

90.91

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVK SIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQERLSA
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA

Query:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
        LGNTIACNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDW 
Subjt:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT

Query:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        AFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

XP_022931983.1 eukaryotic translation initiation factor 6-2-like [Cucurbita moschata]

1.6e-115

90.91

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVKTSIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQERLSA
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA

Query:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
        LGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL ANDWT
Subjt:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT

Query:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        AFCGSDTTATELSVIESVFKLRE QPSSIV+EMRKSLIDSYV
Subjt:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

XP_022973842.1 eukaryotic translation initiation factor 6-2 [Cucurbita maxima]

5.5e-116

91.32

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVKTSIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQERLSA
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA

Query:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
        LGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL ANDWT
Subjt:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT

Query:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        AFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

XP_038880643.1 eukaryotic translation initiation factor 6-2-like [Benincasa hispida]

1.1e-116

92.56

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVK SIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQERLSA
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA

Query:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
        LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDW 
Subjt:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT

Query:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
Subjt:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

XP_038900322.1 eukaryotic translation initiation factor 6-2 [Benincasa hispida]

6.5e-117

92.56

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FETELGGVIPVVK SIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQERLSA
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA

Query:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
        LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
Subjt:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT

Query:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
Subjt:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D392 Eukaryotic translation initiation factor 6

1.7e-115

90.91

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVK SIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQERLSA
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA

Query:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
        LGNTIACNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDW 
Subjt:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT

Query:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        AFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

A0A6J1F0A8 Eukaryotic translation initiation factor 6

7.8e-116

90.91

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVKTSIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQERLSA
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA

Query:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
        LGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL ANDWT
Subjt:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT

Query:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        AFCGSDTTATELSVIESVFKLRE QPSSIV+EMRKSLIDSYV
Subjt:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

A0A6J1G8F7 Eukaryotic translation initiation factor 6

6.6e-115

90.08

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE EL GVIPVVKTSIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQERLSA
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA

Query:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
        LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL  NDWT
Subjt:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT

Query:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        AFCGSDTTATELSV+ESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

A0A6J1I8L9 Eukaryotic translation initiation factor 6

2.7e-116

91.32

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVKTSIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQERLSA
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA

Query:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
        LGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL ANDWT
Subjt:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT

Query:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        AFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

A0A6J1L2F0 Eukaryotic translation initiation factor 6

6.6e-115

90.08

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE EL GVIPVVKTSIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQERLSA
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA

Query:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
        LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL  NDWT
Subjt:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT

Query:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        AFCGSDTTATELSV+ESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

SwissProt top hits

e value

%identity

Alignment

O55135 Eukaryotic translation initiation factor 6

3.2e-90

70.42

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA
        R  FEN+CE+G F+KLTNAYCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C                ELQH+RNSLPD V ++R++ERLSA
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA

Query:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
        LGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  NDW 
Subjt:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT

Query:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
        AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SLIDS
Subjt:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS

P56537 Eukaryotic translation initiation factor 6

3.2e-90

70.83

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA
        R  FEN+CEIG F+KLTN YCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C                ELQH+RNSLPD V ++R++ERLSA
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA

Query:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
        LGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  NDW 
Subjt:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT

Query:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
        AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SLIDS
Subjt:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS

Q3KRD8 Eukaryotic translation initiation factor 6

9.2e-90

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA
        R  FEN+CE+G F+KLTN YCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C                ELQH+RNSLPD V ++R++ERLSA
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA

Query:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
        LGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  NDW 
Subjt:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT

Query:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
        AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SLIDS
Subjt:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS

Q9M060 Eukaryotic translation initiation factor 6-2

8.8e-109

81.82

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA
        RL FEN+CE+GVFSKLTNAYCLVAIGGSENFYSAFE+EL  VIP+VKTSI GTRIIGRLCA               ELQHLRNSLPDQVVVQRI ERLSA
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA

Query:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
        LGN IACND+VAL HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC  +N+GG+VHPHTSVEDL+ELSTLLQVPLVAGTVNRGSEVIAAG+T NDWT
Subjt:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT

Query:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        +FCGSDTTATELSVI+S+FKLREAQPSSIV+EMRKSLID+YV
Subjt:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

Q9TU47 Eukaryotic translation initiation factor 6

1.1e-90

70.83

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA
        R  FEN+CEIG F+KLTN+YCLVAIGGSENFYS FE EL G IPVV  SI G RIIGR+C                ELQH+RN LPD V ++R++ERLSA
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA

Query:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
        LGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  NDW 
Subjt:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT

Query:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
        AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SLIDS
Subjt:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS

Arabidopsis top hits

e value

%identity

Alignment

AT2G39820.1 Translation initiation factor IF6

2.5e-82

62.7

Show/hide

Query:  RLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERL
        RL ++ N+CEIGVFSKLTNAYCLV A   S NF++ +E++L GVIP+V TSI G+  IG LC                ELQHLR+SLPD+VVVQRI+E +
Subjt:  RLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERL

Query:  SALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAND
         ALGN IACND+VAL H  L+++TEE+I+DVLGVEV+RQT+A N LVGSYC+ +N GG+VH +T+VE++ EL+ L+QVPLVAGTVNRGS+VI+AGLT ND
Subjt:  SALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAND

Query:  WTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        WTAFCGSDTTA ELSV+ ++FKL ++QP  +  EMRKSLID+YV
Subjt:  WTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

AT3G55620.1 Translation initiation factor IF6

6.3e-110

81.82

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA
        RL FEN+CE+GVFSKLTNAYCLVAIGGSENFYSAFE+EL  VIP+VKTSI GTRIIGRLCA               ELQHLRNSLPDQVVVQRI ERLSA
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQERLSA

Query:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT
        LGN IACND+VAL HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC  +N+GG+VHPHTSVEDL+ELSTLLQVPLVAGTVNRGSEVIAAG+T NDWT
Subjt:  LGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWT

Query:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        +FCGSDTTATELSVI+S+FKLREAQPSSIV+EMRKSLID+YV
Subjt:  AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

Sequences

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CDS sequence

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ATGACAAGTTGGGCAGCCGTGAACCGTAAATTCTCTCTCCCTCTTACCCGCCCACACGCCCCTCTCATACGCTTCTATCTCTCAAGCTCGCGCATCTGCAAGCCGCTCGC
CTCCGTCCAACTGCCGCCACCGTCGACTGGAGTCCGCCGCTGCCTCGCCACCGCTAATGTTCGCTGCCAGTTCGCCGCCATCGTAAAGTCGCCGCTGTTCGTCCTCGAGC
CCCCGCCAAATTCGGTATTGTGCAGGCTTATGTTTGAGAACTCTTGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAG
AATTTCTACAGTGCCTTTGAAACTGAATTAGGTGGTGTCATTCCGGTTGTTAAAACATCTATTGATGGCACTCGCATTATTGGCCGTCTTTGTGCTGAACTTCAGCACTT
GAGGAACAGTCTACCAGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTATCTGCTTTGGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACGCATACTGATC
TTGATCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTAGCGGGCAACGTTCTCGTGGGAAGCTACTGTAATTTCACAAATAGG
GGTGGCTTGGTTCATCCACATACATCTGTTGAGGATTTGGACGAGCTATCAACCCTTCTTCAAGTCCCTTTAGTTGCTGGAACCGTGAATCGTGGAAGTGAAGTTATTGC
TGCTGGATTGACAGCAAATGACTGGACTGCATTTTGTGGTTCCGACACCACTGCCACCGAGTTATCGGTCATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGTT
CCATTGTTGAAGAAATGAGGAAGTCGCTAATAGACAGTTACGTGTGA

mRNA sequence

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Protein sequence

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MTSWAAVNRKFSLPLTRPHAPLIRFYLSSSRICKPLASVQLPPPSTGVRRCLATANVRCQFAAIVKSPLFVLEPPPNSVLCRLMFENSCEIGVFSKLTNAYCLVAIGGSE
NFYSAFETELGGVIPVVKTSIDGTRIIGRLCAELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNR
GGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

HG10008124 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome