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HG10008170 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008170
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein sumv-1 like
Genome locationChr10:20475418..20475678
RNA-Seq ExpressionHG10008170
SyntenyHG10008170
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035091.1 putative transmembrane protein [Cucumis melo var. makuwa]1.5e-3490.59Show/hide
Query:  MAGSQQVNAAADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR
        M GSQQVNA  D MKGPSPAQH+TEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVT GISTP+NT PR
Subjt:  MAGSQQVNAAADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR

KAE8126076.1 hypothetical protein FH972_020822 [Carpinus fangiana]1.3e-2777.91Show/hide
Query:  MAGSQQVNA-AADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR
        MAG QQV A  A+ MKGPSP QHSTEVLHQR+KLP CPMRMAIGGFAI A LGY VLY+KKKPEASA DVAKV  G+S PENT PR
Subjt:  MAGSQQVNA-AADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR

PQP98417.1 hypothetical protein Pyn_22000 [Prunus yedoensis var. nudiflora]1.3e-2777.01Show/hide
Query:  MAGSQQVNAA--ADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR
        MAG QQV AA  A GMKGPSPAQHSTEVLHQ  KL  CPMRMA+GGFA+  T+GYF LYTKKKPEASALDVAKV  G S PENT PR
Subjt:  MAGSQQVNAA--ADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR

PQP99204.1 hypothetical protein Pyn_32198 [Prunus yedoensis var. nudiflora]2.3e-2777.01Show/hide
Query:  MAGSQQVNAA--ADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR
        MAG QQV AA  A GMKGPSPAQHSTEVLHQ  KL  CPMRMA+GGFA+  T+GYF LYTKKKPEASALDVAKV  G S PENT PR
Subjt:  MAGSQQVNAA--ADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR

XP_022134574.1 uncharacterized protein LOC111006810 [Momordica charantia]1.2e-2881.18Show/hide
Query:  MAGSQQVNAAADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR
        MAGSQQ+N       GPSPAQH+TEVL QRKKLPVCPM+MA+GGF IAATLGYFVL TKKKPEASALDVAKVTAG++TPENTRPR
Subjt:  MAGSQQVNAAADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR

TrEMBL top hitse value%identityAlignment
A0A314XVK0 Uncharacterized protein1.1e-2777.01Show/hide
Query:  MAGSQQVNAA--ADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR
        MAG QQV AA  A GMKGPSPAQHSTEVLHQ  KL  CPMRMA+GGFA+  T+GYF LYTKKKPEASALDVAKV  G S PENT PR
Subjt:  MAGSQQVNAA--ADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR

A0A314Y3C0 Uncharacterized protein6.5e-2877.01Show/hide
Query:  MAGSQQVNAA--ADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR
        MAG QQV AA  A GMKGPSPAQHSTEVLHQ  KL  CPMRMA+GGFA+  T+GYF LYTKKKPEASALDVAKV  G S PENT PR
Subjt:  MAGSQQVNAA--ADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR

A0A5D3BA37 Putative transmembrane protein7.1e-3590.59Show/hide
Query:  MAGSQQVNAAADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR
        M GSQQVNA  D MKGPSPAQH+TEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVT GISTP+NT PR
Subjt:  MAGSQQVNAAADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR

A0A5N6RUE0 Uncharacterized protein6.5e-2877.91Show/hide
Query:  MAGSQQVNA-AADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR
        MAG QQV A  A+ MKGPSP QHSTEVLHQR+KLP CPMRMAIGGFAI A LGY VLY+KKKPEASA DVAKV  G+S PENT PR
Subjt:  MAGSQQVNA-AADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR

A0A6J1BZ44 uncharacterized protein LOC1110068105.8e-2981.18Show/hide
Query:  MAGSQQVNAAADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR
        MAGSQQ+N       GPSPAQH+TEVL QRKKLPVCPM+MA+GGF IAATLGYFVL TKKKPEASALDVAKVTAG++TPENTRPR
Subjt:  MAGSQQVNAAADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31830.1 unknown protein2.2e-1245.12Show/hide
Query:  SQQVNAAADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR
        S+ V AA        P  +   VLHQR+ LP     MA+ G AI+  + Y V+Y KKKPEA+A DVAK   G + PE+T PR
Subjt:  SQQVNAAADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGATCACAGCAAGTTAATGCCGCCGCTGATGGAATGAAGGGTCCATCTCCGGCTCAGCACAGCACCGAGGTTCTTCACCAGCGCAAGAAACTCCCTGTTTGTCC
GATGAGAATGGCGATCGGCGGTTTTGCCATCGCCGCCACACTAGGTTACTTTGTCCTCTACACGAAGAAGAAGCCGGAAGCTTCCGCTCTTGATGTCGCGAAAGTTACCG
CCGGTATCTCTACTCCGGAGAATACCCGTCCTCGCATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGATCACAGCAAGTTAATGCCGCCGCTGATGGAATGAAGGGTCCATCTCCGGCTCAGCACAGCACCGAGGTTCTTCACCAGCGCAAGAAACTCCCTGTTTGTCC
GATGAGAATGGCGATCGGCGGTTTTGCCATCGCCGCCACACTAGGTTACTTTGTCCTCTACACGAAGAAGAAGCCGGAAGCTTCCGCTCTTGATGTCGCGAAAGTTACCG
CCGGTATCTCTACTCCGGAGAATACCCGTCCTCGCATGTAG
Protein sequenceShow/hide protein sequence
MAGSQQVNAAADGMKGPSPAQHSTEVLHQRKKLPVCPMRMAIGGFAIAATLGYFVLYTKKKPEASALDVAKVTAGISTPENTRPRM