CuGenDBv2

Gene ID	HG10008190
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ATP-dependent DNA helicase
Genome location	Chr10:20634786..20635382
RNA-Seq Expression	HG10008190
Synteny	HG10008190
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008443830.1 PREDICTED: uncharacterized protein LOC103487331 isoform X1 [Cucumis melo]

2.3e-83

84.34

Show/hide

Query:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC
        MDAHEI EN SSKVT+KPRNWE IKV GLHPSMSMSDLVNHIGHHITEQMAS+KTPFVDDGSE+YQAMLDDIAQYLLSDNQLSA SDEVSLMSRV+SLCC
Subjt:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC

Query:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD
        LLQKEPVQSSQTNGEN  EG   KDD QLK   ELRDG+NIE+HI I P      SGSIQAS+MSRKDSYG+LLLHLPRIASLPKFLFDISDGDE QD
Subjt:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD

XP_008443831.1 PREDICTED: uncharacterized protein LOC103487331 isoform X2 [Cucumis melo]

2.3e-83

84.34

Show/hide

Query:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC
        MDAHEI EN SSKVT+KPRNWE IKV GLHPSMSMSDLVNHIGHHITEQMAS+KTPFVDDGSE+YQAMLDDIAQYLLSDNQLSA SDEVSLMSRV+SLCC
Subjt:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC

Query:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD
        LLQKEPVQSSQTNGEN  EG   KDD QLK   ELRDG+NIE+HI I P      SGSIQAS+MSRKDSYG+LLLHLPRIASLPKFLFDISDGDE QD
Subjt:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD

XP_008443833.1 PREDICTED: uncharacterized protein LOC103487331 isoform X4 [Cucumis melo]

2.3e-83

84.34

Show/hide

Query:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC
        MDAHEI EN SSKVT+KPRNWE IKV GLHPSMSMSDLVNHIGHHITEQMAS+KTPFVDDGSE+YQAMLDDIAQYLLSDNQLSA SDEVSLMSRV+SLCC
Subjt:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC

Query:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD
        LLQKEPVQSSQTNGEN  EG   KDD QLK   ELRDG+NIE+HI I P      SGSIQAS+MSRKDSYG+LLLHLPRIASLPKFLFDISDGDE QD
Subjt:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD

XP_038879515.1 uncharacterized protein LOC120071357 isoform X1 [Benincasa hispida]

4.4e-90

86.87

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Query:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC
        MDAHEI ENRS+KVT KPRNWEQIKV G+HPS+SMSDLVNHIGHHITEQMAS+KTPFVD+GSE+YQ+MLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC
Subjt:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC

Query:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD
        LLQKEPVQSSQTNGENCVEGA Y+DDV +     LRDG+NIEDHIKIHPE   +VSGSIQASAMSRKDSYGDLLLHLPRIASLPK LFDISDGDE QD
Subjt:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD

XP_038879516.1 uncharacterized protein LOC120071357 isoform X2 [Benincasa hispida]

4.4e-90

86.87

Show/hide

Query:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC
        MDAHEI ENRS+KVT KPRNWEQIKV G+HPS+SMSDLVNHIGHHITEQMAS+KTPFVD+GSE+YQ+MLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC
Subjt:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC

Query:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD
        LLQKEPVQSSQTNGENCVEGA Y+DDV +     LRDG+NIEDHIKIHPE   +VSGSIQASAMSRKDSYGDLLLHLPRIASLPK LFDISDGDE QD
Subjt:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B8H0 uncharacterized protein LOC103487331 isoform X1

1.1e-83

84.34

Show/hide

Query:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC
        MDAHEI EN SSKVT+KPRNWE IKV GLHPSMSMSDLVNHIGHHITEQMAS+KTPFVDDGSE+YQAMLDDIAQYLLSDNQLSA SDEVSLMSRV+SLCC
Subjt:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC

Query:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD
        LLQKEPVQSSQTNGEN  EG   KDD QLK   ELRDG+NIE+HI I P      SGSIQAS+MSRKDSYG+LLLHLPRIASLPKFLFDISDGDE QD
Subjt:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD

A0A1S3B8X8 uncharacterized protein LOC103487331 isoform X2

1.1e-83

84.34

Show/hide

Query:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC
        MDAHEI EN SSKVT+KPRNWE IKV GLHPSMSMSDLVNHIGHHITEQMAS+KTPFVDDGSE+YQAMLDDIAQYLLSDNQLSA SDEVSLMSRV+SLCC
Subjt:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC

Query:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD
        LLQKEPVQSSQTNGEN  EG   KDD QLK   ELRDG+NIE+HI I P      SGSIQAS+MSRKDSYG+LLLHLPRIASLPKFLFDISDGDE QD
Subjt:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD

A0A1S3B908 uncharacterized protein LOC103487331 isoform X3

1.1e-83

84.34

Show/hide

Query:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC
        MDAHEI EN SSKVT+KPRNWE IKV GLHPSMSMSDLVNHIGHHITEQMAS+KTPFVDDGSE+YQAMLDDIAQYLLSDNQLSA SDEVSLMSRV+SLCC
Subjt:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC

Query:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD
        LLQKEPVQSSQTNGEN  EG   KDD QLK   ELRDG+NIE+HI I P      SGSIQAS+MSRKDSYG+LLLHLPRIASLPKFLFDISDGDE QD
Subjt:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD

A0A1S3B9Q0 uncharacterized protein LOC103487331 isoform X4

1.1e-83

84.34

Show/hide

Query:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC
        MDAHEI EN SSKVT+KPRNWE IKV GLHPSMSMSDLVNHIGHHITEQMAS+KTPFVDDGSE+YQAMLDDIAQYLLSDNQLSA SDEVSLMSRV+SLCC
Subjt:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC

Query:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD
        LLQKEPVQSSQTNGEN  EG   KDD QLK   ELRDG+NIE+HI I P      SGSIQAS+MSRKDSYG+LLLHLPRIASLPKFLFDISDGDE QD
Subjt:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD

A0A5D3BBH6 Uncharacterized protein

7.3e-83

83.84

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Query:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC
        MDAHEI EN SSKVT+KPRNWE IKV GLHPSMSMSDLVNHIGHHITEQMAS+KTPFVDDGSE+YQAMLDDIAQYLLSDNQLSA SDEVSLMSRV+SLCC
Subjt:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC

Query:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD
        LLQKEPVQSSQTNGEN  EG   KDD QLK    LRDG+NIE+HI I P      SGSIQAS+MSRKDSYG+LLLHLPRIASLPKFLFDISDGDE QD
Subjt:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G24100.1 unknown protein

2.1e-18

35.57

Show/hide

Query:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC
        MDA  I     S  +     W QIK+ GLH S+SM+D +                 F+ D + +     +++ Q LLSDN  +  SDE S+MS+V+S C 
Subjt:  MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCC

Query:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGD
        LLQ     +SQ N E              +  V + + R++ +  K      +  S S     MSRKDS+ DLL+HLPRI SLPKFLF+IS+ D
Subjt:  LLQKEPVQSSQTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGD

AT4G30780.1 unknown protein

5.2e-17

Show/hide

Query:  EQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEP--VQSSQTNGENCVE
        +QIKV GLH SMS+SD V      +    A    P   +  EK++ M     Q LLSDN    A DE SLM RV+SL  LL K+P    +SQ N E  V 
Subjt:  EQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEP--VQSSQTNGENCVE

Query:  GAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGD
               ++ +    + D  N  +    +  +  D + S +   M RKDS+ DLLLHLPRI SLPKFL +IS+ D
Subjt:  GAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGATGCTCACGAGATTGTAGAGAATAGAAGTAGTAAAGTTACCAACAAGCCAAGAAACTGGGAGCAGATAAAGGTTCTGGGGCTTCATCCATCCATGTCGATGAGCGA
CCTTGTCAACCACATTGGACATCATATTACAGAACAAATGGCTTCTTCAAAGACACCTTTTGTTGATGATGGTTCGGAGAAATACCAAGCTATGCTGGATGACATTGCAC
AATACTTGCTGAGTGACAATCAATTGTCAGCAGCTTCTGATGAGGTATCACTCATGTCAAGAGTCGATTCTCTCTGCTGCCTGTTGCAGAAAGAACCTGTTCAAAGTTCC
CAAACCAATGGTGAAAACTGTGTTGAAGGAGCCATCTACAAAGATGATGTTCAACTCAAGGATGCTGTGGAGTTGAGGGATGGCAGGAATATTGAAGACCATATCAAGAT
TCATCCCGAAAAGAAAAACGATGTTTCTGGAAGCATACAAGCCTCAGCTATGTCAAGGAAAGATTCGTATGGGGATTTGTTGTTGCATCTTCCTCGAATTGCATCGCTCC
CTAAGTTCTTATTTGACATTTCAGATGGTGATGAAAGTCAAGATTAA

mRNA sequence

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Protein sequence

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MDAHEIVENRSSKVTNKPRNWEQIKVLGLHPSMSMSDLVNHIGHHITEQMASSKTPFVDDGSEKYQAMLDDIAQYLLSDNQLSAASDEVSLMSRVDSLCCLLQKEPVQSS
QTNGENCVEGAIYKDDVQLKDAVELRDGRNIEDHIKIHPEKKNDVSGSIQASAMSRKDSYGDLLLHLPRIASLPKFLFDISDGDESQD

HG10008190 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome