; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008192 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008192
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description50S ribosomal protein L35
Genome locationChr10:20642727..20644732
RNA-Seq ExpressionHG10008192
SyntenyHG10008192
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001706 - Ribosomal protein L35, non-mitochondrial
IPR018265 - Ribosomal protein L35, conserved site
IPR021137 - Ribosomal protein L35
IPR037229 - Ribosomal protein L35 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035109.1 50S ribosomal protein L35 [Cucumis melo var. makuwa]1.4e-6488.74Show/hide
Query:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASASMAVSFGLRFS LCSRPS RVSH+SVGLASFNK NSLKLSSSHNISG+G+ FLQK SHI+PTSQIH PFTVFAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKN KRRLRLSK+HPVSRSDYDNVIGALPYLK + + K
Subjt:  IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

XP_004146668.1 50S ribosomal protein L35, chloroplastic [Cucumis sativus]1.8e-6489.4Show/hide
Query:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASASMAVSFGLRFS LCSRPS RVSH+SVG+AS NK NSLKLSSSHNISG+G   LQKPSHI+PTSQI  PFTVFAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLL KKN KRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

XP_008443834.1 PREDICTED: 50S ribosomal protein L35, chloroplastic [Cucumis melo]2.7e-6892.05Show/hide
Query:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASASMAVSFGLRFS LCSRPS RVSH+SVGLASFNK NSLKLSSSHNISG+G+ FLQKPSHI+PTSQIH PFTVFAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKN KRRLRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

XP_022135558.1 50S ribosomal protein L35, chloroplastic isoform X1 [Momordica charantia]8.5e-6287.5Show/hide
Query:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLA-SFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRG
        MASAS  VSFGLRFS LCSRPSVRVSH SV LA SFNK NSL+L SS NISG+GVA LQK  HIAPTSQ+H P TV AAKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLA-SFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        KIVRRRAGKQHLLYKKNTKR+LRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  KIVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

XP_038878434.1 50S ribosomal protein L35, chloroplastic [Benincasa hispida]1.4e-6793.38Show/hide
Query:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASASMAVS GLRFS L SRPSVRVSHSSVGLASFNK NSLKLSSS+NISG+GV FLQKPSHI+PT QIH PFTVFAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

TrEMBL top hitse value%identityAlignment
A0A0A0LYX0 50S ribosomal protein L358.9e-6589.4Show/hide
Query:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASASMAVSFGLRFS LCSRPS RVSH+SVG+AS NK NSLKLSSSHNISG+G   LQKPSHI+PTSQI  PFTVFAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLL KKN KRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

A0A1S3B9R8 50S ribosomal protein L351.3e-6892.05Show/hide
Query:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASASMAVSFGLRFS LCSRPS RVSH+SVGLASFNK NSLKLSSSHNISG+G+ FLQKPSHI+PTSQIH PFTVFAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKN KRRLRLSK+HPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

A0A5D3B7R7 50S ribosomal protein L356.8e-6588.74Show/hide
Query:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASASMAVSFGLRFS LCSRPS RVSH+SVGLASFNK NSLKLSSSHNISG+G+ FLQK SHI+PTSQIH PFTVFAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKN KRRLRLSK+HPVSRSDYDNVIGALPYLK + + K
Subjt:  IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

A0A6J1C550 50S ribosomal protein L354.1e-6287.5Show/hide
Query:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLA-SFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRG
        MASAS  VSFGLRFS LCSRPSVRVSH SV LA SFNK NSL+L SS NISG+GVA LQK  HIAPTSQ+H P TV AAKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLA-SFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        KIVRRRAGKQHLLYKKNTKR+LRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  KIVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

A0A6J1JDG6 50S ribosomal protein L353.5e-6186.09Show/hide
Query:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGK
        MASAS +VSFGLRFS LCSR SVRVS  SV L S NKA SL+LSSSHN+S +GVA LQKP HIAP+S+IH PFTV AAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
        IVRRRAGKQHLLYKKNTKR+LRLSKMHPVSRSDYDNVIGALPYLKVNRQAK
Subjt:  IVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK

SwissProt top hitse value%identityAlignment
B2J0D1 50S ribosomal protein L358.7e-0955.56Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYL
        K+KT KA+AKRFR TG GKIVRR+AGK HLL  K++ ++  +SK   V   D  NV   LPYL
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYL

P23326 50S ribosomal protein L35, chloroplastic1.1e-3261.15Show/hide
Query:  MASASMAVSFGLRFSSLCSRPSVRVSHS-SVGLASFNK--ANSLKLSSSHNISGYGV-AFLQKPSHI----APTSQIHVPFTVFAAKGYKMKTHKASAKR
        MASA+  +SF     SL S PS R S +  + L  FNK   ++L LSSS +IS   V   + K   I    +  S     FTVFAAKGYKMKTHKASAKR
Subjt:  MASASMAVSFGLRFSSLCSRPSVRVSHS-SVGLASFNK--ANSLKLSSSHNISGYGV-AFLQKPSHI----APTSQIHVPFTVFAAKGYKMKTHKASAKR

Query:  FRVTGRGKIVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQ
        FRVTG+GKIVRRRAGKQHLL KKNTKR+ RLSK+  V RSDYDNVIGALPYLKVNR+
Subjt:  FRVTGRGKIVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQ

Q3M7I2 50S ribosomal protein L357.9e-1057.14Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYL
        K+KT KA+AKRFR TG GKIVRR+A K HLL  K T ++ + SKM  V+  D +NV   LPYL
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYL

Q8VZ55 50S ribosomal protein L35, chloroplastic2.1e-3464.47Show/hide
Query:  MASASMAVSFGLRFSSLCSRPSVRVS-HSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIA-PTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGR
        MAS SMA S  + F       S +VS  SSV  A+        LSSSH+ISG       K S +A P SQ    FTVFA KGYKMKTHKASAKRFRVTGR
Subjt:  MASASMAVSFGLRFSSLCSRPSVRVS-HSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIA-PTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGR

Query:  GKIVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQA
        GKIVRRR+GKQHLL KKN KR+LRLSKM  V+RSDYDNVIGALPYLKVNR+A
Subjt:  GKIVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQA

Q8YRL9 50S ribosomal protein L357.9e-1057.14Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYL
        K+KT KA+AKRFR TG GKIVRR+A K HLL  K T ++ + SKM  V+  D +NV   LPYL
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYL

Arabidopsis top hitse value%identityAlignment
AT2G24090.1 Ribosomal protein L351.5e-3564.47Show/hide
Query:  MASASMAVSFGLRFSSLCSRPSVRVS-HSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIA-PTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGR
        MAS SMA S  + F       S +VS  SSV  A+        LSSSH+ISG       K S +A P SQ    FTVFA KGYKMKTHKASAKRFRVTGR
Subjt:  MASASMAVSFGLRFSSLCSRPSVRVS-HSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIA-PTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGR

Query:  GKIVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQA
        GKIVRRR+GKQHLL KKN KR+LRLSKM  V+RSDYDNVIGALPYLKVNR+A
Subjt:  GKIVRRRAGKQHLLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTGCTTCAATGGCGGTGTCCTTTGGTCTTAGGTTTTCCTCACTGTGCTCTCGCCCGTCAGTTCGCGTCTCTCATAGTTCCGTCGGACTCGCTTCGTTCAACAA
GGCTAATTCCTTGAAGCTTAGTTCCTCCCACAACATTTCCGGCTATGGAGTCGCTTTCCTTCAGAAGCCATCTCACATTGCTCCCACTTCTCAAATTCATGTTCCTTTCA
CTGTTTTCGCTGCTAAAGGCTACAAAATGAAAACCCACAAGGCTTCGGCGAAGCGATTCAGAGTAACGGGTCGGGGGAAAATAGTTCGGAGGAGAGCTGGAAAGCAGCAT
TTACTGTACAAGAAGAACACAAAGAGGAGACTACGGCTTTCCAAAATGCACCCAGTGAGCCGGAGTGACTATGATAATGTGATTGGTGCTTTGCCGTACCTGAAGGTGAA
TAGACAAGCCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCTGCTTCAATGGCGGTGTCCTTTGGTCTTAGGTTTTCCTCACTGTGCTCTCGCCCGTCAGTTCGCGTCTCTCATAGTTCCGTCGGACTCGCTTCGTTCAACAA
GGCTAATTCCTTGAAGCTTAGTTCCTCCCACAACATTTCCGGCTATGGAGTCGCTTTCCTTCAGAAGCCATCTCACATTGCTCCCACTTCTCAAATTCATGTTCCTTTCA
CTGTTTTCGCTGCTAAAGGCTACAAAATGAAAACCCACAAGGCTTCGGCGAAGCGATTCAGAGTAACGGGTCGGGGGAAAATAGTTCGGAGGAGAGCTGGAAAGCAGCAT
TTACTGTACAAGAAGAACACAAAGAGGAGACTACGGCTTTCCAAAATGCACCCAGTGAGCCGGAGTGACTATGATAATGTGATTGGTGCTTTGCCGTACCTGAAGGTGAA
TAGACAAGCCAAGTAG
Protein sequenceShow/hide protein sequence
MASASMAVSFGLRFSSLCSRPSVRVSHSSVGLASFNKANSLKLSSSHNISGYGVAFLQKPSHIAPTSQIHVPFTVFAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQH
LLYKKNTKRRLRLSKMHPVSRSDYDNVIGALPYLKVNRQAK