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HG10008204 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008204
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationChr10:20801784..20802155
RNA-Seq ExpressionHG10008204
SyntenyHG10008204
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016899784.1 PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]4.5e-2987.4Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG--SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        M   KSLVLAALLVSS FV+S SRVARKDLG+DLGGVG+G+G GIGIGLGGSGSGSGSGSGSGSG  SSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG--SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGR--EGGGSGYGGGYGSGYGGGHGK
        S GR  EGGGSGYGGGYGSGYGGGHGK
Subjt:  SGGR--EGGGSGYGGGYGSGYGGGHGK

XP_022921886.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]2.4e-3089.6Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSG--SGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        M  +KSL+LAA+LVSSL V+S SRVARKDLG+DLGGVGVGIGAGIGIGLGGSGSGSGSGSGSG  S SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSG--SGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGREGGGSGYGGGYGSGYGGGHGK
        SGGR GGGSGYGGGYGSGYGGGHGK
Subjt:  SGGREGGGSGYGGGYGSGYGGGHGK

XP_022988598.1 glycine-rich cell wall structural protein 2-like [Cucurbita maxima]1.2e-2989.6Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSG--SGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        M   KSLVLAA+LVSSL V+S SRVARKDLG+DLGGVGVGIGAGIGIGLGGSGSGSGSGSGSG  S SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSG--SGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGREGGGSGYGGGYGSGYGGGHGK
        SGG  GGGSGYGGGYGSGYGGGHGK
Subjt:  SGGREGGGSGYGGGYGSGYGGGHGK

XP_023515822.1 counting factor 45-1-like [Cucurbita pepo subsp. pepo]3.7e-3190.24Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG
        M  +KSL+LAA+LVSSL V+S SRVARKDLG+DLGGVGVGIGAGIGIGLGGSGSGSGSGSGS S SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG

Query:  GREGGGSGYGGGYGSGYGGGHGK
        GR GGGSGYGGGYGSGYGGGHGK
Subjt:  GREGGGSGYGGGYGSGYGGGHGK

XP_038879831.1 glycine-rich cell wall structural protein 2 [Benincasa hispida]6.3e-3189.76Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG----SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAG
        M   KSLVLAALLVSSLFV+SHSRVARKDLG+DLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG    SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG----SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAG

Query:  SGSGGREGGGSGYGGGYGSGYGGGHGK
        SGSGG  GGGSGYGGGYG GYGGGH K
Subjt:  SGSGGREGGGSGYGGGYGSGYGGGHGK

TrEMBL top hitse value%identityAlignment
A0A0A0LWP0 Uncharacterized protein2.9e-2986.72Show/hide
Query:  MSCFKSLVLAALLVSSLFVL-SHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG----SSSSSSSSSSSSGSGSDSGSEAGSYAGSRA
        M   KSLVLAALLVSSLFV+ S SRVARKDLG+DLGGVG+G+GAG+GIGLGGSGSG+GSGSGSGSG    SSSSSSSSSSSSGSGSDSGSEAGSYAGSRA
Subjt:  MSCFKSLVLAALLVSSLFVL-SHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG----SSSSSSSSSSSSGSGSDSGSEAGSYAGSRA

Query:  GSGSGGREGGGSGYGGGYGSGYGGGHGK
        GSGSGGR G GSGYGGGYGSGYGGGHGK
Subjt:  GSGSGGREGGGSGYGGGYGSGYGGGHGK

A0A1S4DUX4 glycine-rich cell wall structural protein 2-like2.2e-2987.4Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG--SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        M   KSLVLAALLVSS FV+S SRVARKDLG+DLGGVG+G+G GIGIGLGGSGSGSGSGSGSGSG  SSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG--SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGR--EGGGSGYGGGYGSGYGGGHGK
        S GR  EGGGSGYGGGYGSGYGGGHGK
Subjt:  SGGR--EGGGSGYGGGYGSGYGGGHGK

A0A5A7T0K2 Glycine-rich cell wall structural protein 2-like2.2e-2987.4Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG--SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        M   KSLVLAALLVSS FV+S SRVARKDLG+DLGGVG+G+G GIGIGLGGSGSGSGSGSGSGSG  SSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG--SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGR--EGGGSGYGGGYGSGYGGGHGK
        S GR  EGGGSGYGGGYGSGYGGGHGK
Subjt:  SGGR--EGGGSGYGGGYGSGYGGGHGK

A0A6J1E2L6 glycine-rich cell wall structural protein 2-like1.2e-3089.6Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSG--SGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        M  +KSL+LAA+LVSSL V+S SRVARKDLG+DLGGVGVGIGAGIGIGLGGSGSGSGSGSGSG  S SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSG--SGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGREGGGSGYGGGYGSGYGGGHGK
        SGGR GGGSGYGGGYGSGYGGGHGK
Subjt:  SGGREGGGSGYGGGYGSGYGGGHGK

A0A6J1JMR8 glycine-rich cell wall structural protein 2-like5.8e-3089.6Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSG--SGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        M   KSLVLAA+LVSSL V+S SRVARKDLG+DLGGVGVGIGAGIGIGLGGSGSGSGSGSGSG  S SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSG--SGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGREGGGSGYGGGYGSGYGGGHGK
        SGG  GGGSGYGGGYGSGYGGGHGK
Subjt:  SGGREGGGSGYGGGYGSGYGGGHGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein2.1e-1671.43Show/hide
Query:  VLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGL-GGSGSGSGSGSGSGSG----SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG
        +L  +++SSL +L+ SR+ARKDLGIDLGG+G+G+G G+GIGL GGSGSG+G+GSGSGSG    SSSSSSSSSSSSGSG  +GS AGS+AGSRAGSGSG
Subjt:  VLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGL-GGSGSGSGSGSGSGSG----SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG

AT4G30460.1 glycine-rich protein2.3e-1868.03Show/hide
Query:  SLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG-----SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG
        SL+L  L++++  ++S SRVARKDLG+DLGG+G GIG GIGIG GGSGSG+G+GSGSG G     SSSSSSSSSSS G G D+GSEAGSYAGS AGSGSG
Subjt:  SLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG-----SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG

Query:  GREGGGSGYGGGYGSGYGGGHG
        GR G G G G G G G+GGG G
Subjt:  GREGGGSGYGGGYGSGYGGGHG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGTTTCAAATCCTTGGTTCTTGCTGCTCTGCTTGTTTCGTCTCTTTTTGTTTTATCCCACAGCCGAGTTGCCAGGAAAGACTTGGGCATTGACTTGGGTGGGGT
AGGCGTTGGGATTGGAGCTGGAATTGGCATTGGACTCGGTGGAAGTGGTTCGGGCTCGGGTTCTGGCTCTGGCTCTGGCTCTGGATCAAGTTCGAGTTCTAGCTCTAGCT
CTTCTTCTTCTGGGTCGGGTTCTGACTCTGGATCTGAAGCAGGCTCGTATGCTGGGTCTCGAGCAGGTTCTGGATCGGGTGGTCGAGAAGGTGGAGGGTCGGGCTATGGT
GGAGGATATGGATCGGGTTATGGAGGAGGACATGGAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGTTTCAAATCCTTGGTTCTTGCTGCTCTGCTTGTTTCGTCTCTTTTTGTTTTATCCCACAGCCGAGTTGCCAGGAAAGACTTGGGCATTGACTTGGGTGGGGT
AGGCGTTGGGATTGGAGCTGGAATTGGCATTGGACTCGGTGGAAGTGGTTCGGGCTCGGGTTCTGGCTCTGGCTCTGGCTCTGGATCAAGTTCGAGTTCTAGCTCTAGCT
CTTCTTCTTCTGGGTCGGGTTCTGACTCTGGATCTGAAGCAGGCTCGTATGCTGGGTCTCGAGCAGGTTCTGGATCGGGTGGTCGAGAAGGTGGAGGGTCGGGCTATGGT
GGAGGATATGGATCGGGTTATGGAGGAGGACATGGAAAATGA
Protein sequenceShow/hide protein sequence
MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSGGREGGGSGYG
GGYGSGYGGGHGK