; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008217 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008217
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontranscription factor IBH1-like 1
Genome locationChr10:20948508..20949065
RNA-Seq ExpressionHG10008217
SyntenyHG10008217
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023415.1 Transcription factor IBH1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-6480.68Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS
        MRNPS LKR+FLKKW MGLQIYTT+N NMTV +RK AIKLSADIALASSRNCATRWSRAVIA +SV + + LVA+GVLGRAVCER+K+ S+SKITRSSWS
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS

Query:  SRKILKRSRRVRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLAT
        SRKILKRSRRV RR KC K  AAE +AKR VQKRT+ LRGLVPGGEFMDE+SLIEETLDYI ALQ QVDVMR LAT
Subjt:  SRKILKRSRRVRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLAT

XP_004149880.1 transcription factor IBH1-like 1 [Cucumis sativus]3.5e-7383.51Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS
        M+N +SLK+EF KKWMMGLQIYTT+NENMTVTERK AIKLSADIALASSRNCATRWSRAVIA SSVDNR+  VA+GVLGR +CER+KQISN KITRSSWS
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS

Query:  SRKILKRSRRV----RRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLATAYNPSSSS
        S KI+KRSRRV    RRRNKCM AV   ++A+R VQKRTKVLRGLVPGGEFMDEISLIEETLDY+SALQAQVDVMRFLATAYNPSSSS
Subjt:  SRKILKRSRRV----RRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLATAYNPSSSS

XP_008443801.1 PREDICTED: uncharacterized protein LOC103487305 [Cucumis melo]1.2e-7383.51Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS
        M+NP+SLK+EFLKKWMMGLQIYTT+NENMTV ERK AIKLSADIALASSRNCATRWSRAVIA SSVDNR+ LVA+GVLGR +CER+KQISN KITRSSWS
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS

Query:  SRKILKRSRRV----RRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLATAYNPSSSS
        S KI+KRSRRV    RRRNKCM AV   ++A+R VQ+RTKVLRGLVPGGEFMDEISLIEETLDY+SALQAQVDVMRFLA+AYNPSSSS
Subjt:  SRKILKRSRRV----RRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLATAYNPSSSS

XP_022988593.1 transcription factor IBH1-like 1 [Cucurbita maxima]3.8e-6480.11Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS
        MRNPSSLKR+FLKKW+MGLQIYTT+N NMTV +RK AIKLSADIALASSRNCATRWSRAVIA +SV + + LVA+G+LGRAVCER+KQ S+SKITRSSWS
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS

Query:  SRKILKRSRRVRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLAT
        S KILKRSRRV RR KC K  AAE +A+R VQKRT+ LRGLVPGGEFMDE+SLIEETLDYI ALQ QVDVMR LAT
Subjt:  SRKILKRSRRVRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLAT

XP_038879866.1 transcription factor IBH1-like 1 [Benincasa hispida]1.1e-7991.98Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTT-SNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSW
        MRNPSSLKREFLKKWM GLQIYTT SNENMTV ERK AIKLSADIALASSRNCATRWSRAVIASSSVDNR+R VADGVLGRAVCER+KQISNSK+TRSSW
Subjt:  MRNPSSLKREFLKKWMMGLQIYTT-SNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSW

Query:  SSRKILKRSRRV-RRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLATAYNPSSSSS
        SS  ILKRSRRV RRRNKCMKA+AAESVAKR V KRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMR LATAYNPSSSSS
Subjt:  SSRKILKRSRRV-RRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLATAYNPSSSSS

TrEMBL top hitse value%identityAlignment
A0A0A0LWQ3 Uncharacterized protein1.7e-7383.51Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS
        M+N +SLK+EF KKWMMGLQIYTT+NENMTVTERK AIKLSADIALASSRNCATRWSRAVIA SSVDNR+  VA+GVLGR +CER+KQISN KITRSSWS
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS

Query:  SRKILKRSRRV----RRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLATAYNPSSSS
        S KI+KRSRRV    RRRNKCM AV   ++A+R VQKRTKVLRGLVPGGEFMDEISLIEETLDY+SALQAQVDVMRFLATAYNPSSSS
Subjt:  SRKILKRSRRV----RRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLATAYNPSSSS

A0A1S3B8V1 uncharacterized protein LOC1034873055.8e-7483.51Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS
        M+NP+SLK+EFLKKWMMGLQIYTT+NENMTV ERK AIKLSADIALASSRNCATRWSRAVIA SSVDNR+ LVA+GVLGR +CER+KQISN KITRSSWS
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS

Query:  SRKILKRSRRV----RRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLATAYNPSSSS
        S KI+KRSRRV    RRRNKCM AV   ++A+R VQ+RTKVLRGLVPGGEFMDEISLIEETLDY+SALQAQVDVMRFLA+AYNPSSSS
Subjt:  SRKILKRSRRV----RRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLATAYNPSSSS

A0A6J1E715 transcription factor IBH1-like 11.9e-6480.68Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS
        MRNPS LKR+FLKKW MGLQIYTT+N NMTV +RK AIKLSADIALASSRNCATRWSRAVIA +SV + + LVA+GVLGRAVCER+K+ S+SKITRSSWS
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS

Query:  SRKILKRSRRVRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLAT
        SRKILKRSRRV RR KC K  AAE +AKR VQKRT+ LRGLVPGGEFMDE+SLIEETLDYI ALQ QVDVMR LAT
Subjt:  SRKILKRSRRVRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLAT

A0A6J1F0A2 transcription factor IBH1-like 1 isoform X26.6e-6275.41Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS
        MRNPS LKREFLKKWMMGL+IYTTSN+NMTVT+RKNAIKLSADIALASSRNCATRWS+A+IA++SVD+ +RLVAD +LGR +        N KITR  WS
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS

Query:  SRKILKRSRRVRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLATAYNPSSS
        S KI+KRSRRV+R  +  K  AAE +AK+ V+KR KVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMR LATAY  SSS
Subjt:  SRKILKRSRRVRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLATAYNPSSS

A0A6J1JMR3 transcription factor IBH1-like 11.9e-6480.11Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS
        MRNPSSLKR+FLKKW+MGLQIYTT+N NMTV +RK AIKLSADIALASSRNCATRWSRAVIA +SV + + LVA+G+LGRAVCER+KQ S+SKITRSSWS
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS

Query:  SRKILKRSRRVRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLAT
        S KILKRSRRV RR KC K  AAE +A+R VQKRT+ LRGLVPGGEFMDE+SLIEETLDYI ALQ QVDVMR LAT
Subjt:  SRKILKRSRRVRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLAT

SwissProt top hitse value%identityAlignment
O80482 Transcription factor bHLH1493.5e-0429.68Show/hide
Query:  TTSNE--NMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWSSRKILKRSRRVRRRNKCMKA
        TTSN   +  V+     I+ +AD  LA+S    TRWSRA++AS                  V  ++K+   +K +  +  SRK L  + R++        
Subjt:  TTSNE--NMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWSSRKILKRSRRVRRRNKCMKA

Query:  VAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLA
                  V+++ K+L  LVPG   +   +L++E  DYI+AL+ QV  M  LA
Subjt:  VAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLA

Q9M0B9 Transcription factor IBH1-like 15.4e-2944.94Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS
        M+  SS+  EFLKKW MGLQI+  S +N +V ERK AIKLSAD+A+AS R   T WSRA+I  ++ ++ N LV   + G     + + + N K+ + +  
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS

Query:  SRKILKRSRRVRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFM-DEISLIEETLDYISALQAQVDVMRFLATA
         RKI++RS+++ RR     +  A + AKR V++RT+ LR +VPGGE M +++ L++ETLDYI +LQ QV+VMR +  A
Subjt:  SRKILKRSRRVRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFM-DEISLIEETLDYISALQAQVDVMRFLATA

Arabidopsis top hitse value%identityAlignment
AT1G09250.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.5e-0529.68Show/hide
Query:  TTSNE--NMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWSSRKILKRSRRVRRRNKCMKA
        TTSN   +  V+     I+ +AD  LA+S    TRWSRA++AS                  V  ++K+   +K +  +  SRK L  + R++        
Subjt:  TTSNE--NMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWSSRKILKRSRRVRRRNKCMKA

Query:  VAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLA
                  V+++ K+L  LVPG   +   +L++E  DYI+AL+ QV  M  LA
Subjt:  VAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLA

AT4G30410.1 sequence-specific DNA binding transcription factors3.9e-3044.94Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS
        M+  SS+  EFLKKW MGLQI+  S +N +V ERK AIKLSAD+A+AS R   T WSRA+I  ++ ++ N LV   + G     + + + N K+ + +  
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS

Query:  SRKILKRSRRVRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFM-DEISLIEETLDYISALQAQVDVMRFLATA
         RKI++RS+++ RR     +  A + AKR V++RT+ LR +VPGGE M +++ L++ETLDYI +LQ QV+VMR +  A
Subjt:  SRKILKRSRRVRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFM-DEISLIEETLDYISALQAQVDVMRFLATA

AT4G30410.2 sequence-specific DNA binding transcription factors3.9e-3044.94Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS
        M+  SS+  EFLKKW MGLQI+  S +N +V ERK AIKLSAD+A+AS R   T WSRA+I  ++ ++ N LV   + G     + + + N K+ + +  
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWS

Query:  SRKILKRSRRVRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFM-DEISLIEETLDYISALQAQVDVMRFLATA
         RKI++RS+++ RR     +  A + AKR V++RT+ LR +VPGGE M +++ L++ETLDYI +LQ QV+VMR +  A
Subjt:  SRKILKRSRRVRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFM-DEISLIEETLDYISALQAQVDVMRFLATA

AT5G57780.1 EXPRESSED IN: 18 plant structures8.6e-2241.01Show/hide
Query:  MRNPSSLKREFLKKWMMGLQIYTTSNEN-MTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSW
        M   + +K+EF+KKW+  L +  +S E+ + VTERKNAI+LS+D+A+A++RN +T WSRA+I+ S     N+ +A                         
Subjt:  MRNPSSLKREFLKKWMMGLQIYTTSNEN-MTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSW

Query:  SSRKILKRSRRVRRRNKC-MKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEIS-LIEETLDYISALQAQVDVMRFLA
          R+ILK++R  R +N+C +        AK +V+KRT +L+ LVPGGE +D+   LI ETLDYI  L+AQVDVMR +A
Subjt:  SSRKILKRSRRVRRRNKC-MKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEIS-LIEETLDYISALQAQVDVMRFLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCAATCCCAGTTCGTTAAAACGAGAATTTTTGAAGAAATGGATGATGGGTCTTCAAATATACACAACGTCAAACGAAAACATGACGGTCACCGAGAGAAAAAACGC
CATTAAATTATCTGCAGATATAGCTTTAGCCTCCTCCCGAAACTGCGCCACACGGTGGAGCCGAGCAGTCATCGCCAGCTCCTCCGTCGATAACCGAAACCGCCTGGTGG
CCGATGGCGTACTAGGCCGAGCCGTATGCGAAAGGATGAAGCAAATCAGCAATTCCAAAATCACGCGAAGTTCATGGAGTAGTAGGAAGATTCTGAAAAGAAGCCGCCGT
GTGCGGCGGAGGAATAAATGTATGAAGGCGGTGGCGGCGGAGTCGGTTGCAAAAAGATTTGTGCAAAAAAGAACGAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATT
TATGGATGAAATTTCGTTGATTGAAGAAACCCTAGATTACATATCGGCTCTTCAAGCTCAAGTTGATGTAATGAGGTTTCTTGCAACTGCATACAATCCATCATCATCAT
CATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCAATCCCAGTTCGTTAAAACGAGAATTTTTGAAGAAATGGATGATGGGTCTTCAAATATACACAACGTCAAACGAAAACATGACGGTCACCGAGAGAAAAAACGC
CATTAAATTATCTGCAGATATAGCTTTAGCCTCCTCCCGAAACTGCGCCACACGGTGGAGCCGAGCAGTCATCGCCAGCTCCTCCGTCGATAACCGAAACCGCCTGGTGG
CCGATGGCGTACTAGGCCGAGCCGTATGCGAAAGGATGAAGCAAATCAGCAATTCCAAAATCACGCGAAGTTCATGGAGTAGTAGGAAGATTCTGAAAAGAAGCCGCCGT
GTGCGGCGGAGGAATAAATGTATGAAGGCGGTGGCGGCGGAGTCGGTTGCAAAAAGATTTGTGCAAAAAAGAACGAAAGTGCTACGTGGTTTGGTTCCGGGAGGTGAATT
TATGGATGAAATTTCGTTGATTGAAGAAACCCTAGATTACATATCGGCTCTTCAAGCTCAAGTTGATGTAATGAGGTTTCTTGCAACTGCATACAATCCATCATCATCAT
CATCATGA
Protein sequenceShow/hide protein sequence
MRNPSSLKREFLKKWMMGLQIYTTSNENMTVTERKNAIKLSADIALASSRNCATRWSRAVIASSSVDNRNRLVADGVLGRAVCERMKQISNSKITRSSWSSRKILKRSRR
VRRRNKCMKAVAAESVAKRFVQKRTKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRFLATAYNPSSSSS