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HG10008250 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008250
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box protein PP2-B10-like
Genome locationChr10:21255853..21256065
RNA-Seq ExpressionHG10008250
SyntenyHG10008250
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR025886 - Phloem protein 2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK09505.1 F-box protein PP2-B10-like [Cucumis melo var. makuwa]4.7e-1568.18Show/hide
Query:  RRQPEGMPGLERPQERYDGWFEIELGEFRTGDK-DDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSS
        R Q E MP L+RP +R+DGWFEIELGEF +GD  DDE+EM L +VKG S+K GLVVEGIEIRPK +
Subjt:  RRQPEGMPGLERPQERYDGWFEIELGEFRTGDK-DDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSS

XP_008453627.1 PREDICTED: F-box protein PP2-B10-like [Cucumis melo]4.7e-1568.18Show/hide
Query:  RRQPEGMPGLERPQERYDGWFEIELGEFRTGDK-DDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSS
        R Q E MP L+RP +R+DGWFEIELGEF +GD  DDE+EM L +VKG S+K GLVVEGIEIRPK +
Subjt:  RRQPEGMPGLERPQERYDGWFEIELGEFRTGDK-DDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSS

XP_022135496.1 F-box protein PP2-B10-like [Momordica charantia]4.3e-1672.58Show/hide
Query:  PEGMPGLERPQERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSS
        PE M G ERP++R+DGWFEIELGEF++   DDEIEMVLM+VKG + KSGLVV+GIEIRPK S
Subjt:  PEGMPGLERPQERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSS

XP_038878468.1 F-box protein PP2-B10-like [Benincasa hispida]4.4e-2178.57Show/hide
Query:  MRRQPEGMPGLERPQERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSSRPVV
        MR Q E M GLE P ER+DGWFEIELGEF +GD DDE+EM LM+VKG SAKSGLVVEGIEIRPK SRPVV
Subjt:  MRRQPEGMPGLERPQERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSSRPVV

XP_038880064.1 F-box protein PP2-B10-like [Benincasa hispida]5.4e-1975.76Show/hide
Query:  MRRQPEGMPGLERPQERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSS
        MR Q EGM GLERPQ+R+DGWFEIELGEF +GD DDE+EM L ++KG S KSGLVVEGIEIRPK S
Subjt:  MRRQPEGMPGLERPQERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSS

TrEMBL top hitse value%identityAlignment
A0A1S3BWQ1 F-box protein PP2-B10-like2.3e-1568.18Show/hide
Query:  RRQPEGMPGLERPQERYDGWFEIELGEFRTGDK-DDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSS
        R Q E MP L+RP +R+DGWFEIELGEF +GD  DDE+EM L +VKG S+K GLVVEGIEIRPK +
Subjt:  RRQPEGMPGLERPQERYDGWFEIELGEFRTGDK-DDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSS

A0A5A7UT44 F-box protein PP2-B10-like2.3e-1568.18Show/hide
Query:  RRQPEGMPGLERPQERYDGWFEIELGEFRTGDK-DDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSS
        R Q E MP L+RP +R+DGWFEIELGEF +GD  DDE+EM L +VKG S+K GLVVEGIEIRPK +
Subjt:  RRQPEGMPGLERPQERYDGWFEIELGEFRTGDK-DDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSS

A0A5D3CDA9 F-box protein PP2-B10-like2.3e-1568.18Show/hide
Query:  RRQPEGMPGLERPQERYDGWFEIELGEFRTGDK-DDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSS
        R Q E MP L+RP +R+DGWFEIELGEF +GD  DDE+EM L +VKG S+K GLVVEGIEIRPK +
Subjt:  RRQPEGMPGLERPQERYDGWFEIELGEFRTGDK-DDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSS

A0A6J1C0X7 F-box protein PP2-B10-like2.1e-1672.58Show/hide
Query:  PEGMPGLERPQERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSS
        PE M G ERP++R+DGWFEIELGEF++   DDEIEMVLM+VKG + KSGLVV+GIEIRPK S
Subjt:  PEGMPGLERPQERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSS

A0A6J1KI64 F-box protein PP2-B10-like3.9e-1576.36Show/hide
Query:  GLERPQERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPK
        GLE+P+ER DGWFEIELGEF +GD DDE+EM LM+VKG + K+GLVVEGIEIRPK
Subjt:  GLERPQERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPK

SwissProt top hitse value%identityAlignment
O80494 F-box protein PP2-B151.8e-0954.55Show/hide
Query:  PQERYDGWFEIELGEFRT----GDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPK
        P+ R DGW EIELGEF T    GD D E+ M L +VKG   K G+ ++GIE+RPK
Subjt:  PQERYDGWFEIELGEFRT----GDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPK

Q3E6P4 F-box protein At2g022404.0e-0949.09Show/hide
Query:  RPQERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSSR
        +P +R DGW E ELGEF   ++ DEIE  ++++K  S KSGL+++GIE RP  S+
Subjt:  RPQERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSSR

Q9C7J9 F-box protein PP2-B133.1e-0956.86Show/hide
Query:  PQERYDGWFEIELGEFRTGD-KDDEIEMVLMDVKGCSAKSGLVVEGIEIRP
        P+ R DGW EIELGEF T + +DDE+ M L +VKG   K G+V++GIE+RP
Subjt:  PQERYDGWFEIELGEFRTGD-KDDEIEMVLMDVKGCSAKSGLVVEGIEIRP

Q9C7K0 F-box protein VBF8.1e-1054.72Show/hide
Query:  PQERYDGWFEIELGEFRTGD-KDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKS
        P+ R DGW EIELGEF T + +DDE+ M L +VKG   K G++++GIE+RPK+
Subjt:  PQERYDGWFEIELGEFRTGD-KDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKS

Q9FLU7 Putative F-box protein PP2-B122.6e-0852Show/hide
Query:  QERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPK
        + R DGW EIELGE+  G  D+EIEM +++ +    K G++V+GIEIRPK
Subjt:  QERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPK

Arabidopsis top hitse value%identityAlignment
AT1G09155.1 phloem protein 2-B151.3e-1054.55Show/hide
Query:  PQERYDGWFEIELGEFRT----GDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPK
        P+ R DGW EIELGEF T    GD D E+ M L +VKG   K G+ ++GIE+RPK
Subjt:  PQERYDGWFEIELGEFRT----GDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPK

AT1G56240.1 phloem protein 2-B132.2e-1056.86Show/hide
Query:  PQERYDGWFEIELGEFRTGD-KDDEIEMVLMDVKGCSAKSGLVVEGIEIRP
        P+ R DGW EIELGEF T + +DDE+ M L +VKG   K G+V++GIE+RP
Subjt:  PQERYDGWFEIELGEFRTGD-KDDEIEMVLMDVKGCSAKSGLVVEGIEIRP

AT1G56250.1 phloem protein 2-B145.8e-1154.72Show/hide
Query:  PQERYDGWFEIELGEFRTGD-KDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKS
        P+ R DGW EIELGEF T + +DDE+ M L +VKG   K G++++GIE+RPK+
Subjt:  PQERYDGWFEIELGEFRTGD-KDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKS

AT2G02240.1 F-box family protein2.9e-1049.09Show/hide
Query:  RPQERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSSR
        +P +R DGW E ELGEF   ++ DEIE  ++++K  S KSGL+++GIE RP  S+
Subjt:  RPQERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSSR

AT5G24560.1 phloem protein 2-B121.9e-0952Show/hide
Query:  QERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPK
        + R DGW EIELGE+  G  D+EIEM +++ +    K G++V+GIEIRPK
Subjt:  QERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCGTCAGCCTGAAGGCATGCCAGGGTTAGAGCGGCCACAGGAGAGATATGATGGCTGGTTTGAAATTGAATTGGGAGAATTTCGAACTGGTGATAAAGACGATGA
AATTGAGATGGTTCTTATGGATGTGAAGGGCTGTTCTGCTAAGAGTGGCCTTGTTGTTGAAGGGATTGAGATTAGGCCTAAATCCAGCCGCCCTGTCGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGCGTCAGCCTGAAGGCATGCCAGGGTTAGAGCGGCCACAGGAGAGATATGATGGCTGGTTTGAAATTGAATTGGGAGAATTTCGAACTGGTGATAAAGACGATGA
AATTGAGATGGTTCTTATGGATGTGAAGGGCTGTTCTGCTAAGAGTGGCCTTGTTGTTGAAGGGATTGAGATTAGGCCTAAATCCAGCCGCCCTGTCGTATAG
Protein sequenceShow/hide protein sequence
MRRQPEGMPGLERPQERYDGWFEIELGEFRTGDKDDEIEMVLMDVKGCSAKSGLVVEGIEIRPKSSRPVV