; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008277 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008277
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReplication protein A 32 kDa subunit B-like
Genome locationChr10:21481640..21485240
RNA-Seq ExpressionHG10008277
SyntenyHG10008277
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589705.1 Replication protein A 32 kDa subunit B, partial [Cucurbita argyrosperma subsp. sororia]2.0e-13589.17Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMT QPQMANLSNTP++GYQ PISN
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN

Query:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGDGWK+LEQMVLDFLQLPSCD                      PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG

KAG7023385.1 Replication protein A 32 kDa subunit B [Cucurbita argyrosperma subsp. argyrosperma]2.0e-13589.17Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMT QPQMANLSNTP++GYQ PISN
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN

Query:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGDGWK+LEQMVLDFLQLPSCD                      PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG

XP_008453602.1 PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis melo]4.0e-13689.89Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIESIYVHFYNTRLRKQQSSSMTTQPQM NLSNTP+KGYQAPI+N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN

Query:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGD WKSLEQMVLDFLQLPSCD                      PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG

XP_011656845.1 replication protein A 32 kDa subunit B [Cucumis sativus]4.4e-13589.53Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIESIYVHFYNTRLRKQQSSSMTTQPQM NLSNTPMK YQAPI+N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN

Query:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGD WKSLEQMVLDFLQLPSCD                      PAMKNLEEEGLIYSTTDD+HFKSTANG
Subjt:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG

XP_022988280.1 replication protein A 32 kDa subunit B [Cucurbita maxima]4.4e-13588.81Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMT QPQMANLSNTP++GYQ P+SN
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN

Query:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGDGWK+LEQMVLDFLQLPSCD                      PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG

TrEMBL top hitse value%identityAlignment
A0A1S4DZE3 replication protein A 32 kDa subunit B-like1.9e-13689.89Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIESIYVHFYNTRLRKQQSSSMTTQPQM NLSNTP+KGYQAPI+N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN

Query:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGD WKSLEQMVLDFLQLPSCD                      PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG

A0A5D3CIS3 Replication protein A 32 kDa subunit B-like1.9e-13689.89Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MY SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEIT+HFIESIYVHFYNTRLRKQQSSSMTTQPQM NLSNTP+KGYQAPI+N
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN

Query:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGD WKSLEQMVLDFLQLPSCD                      PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG

A0A6J1E235 replication protein A 32 kDa subunit B-like isoform X22.6e-13388.45Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTG+ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLR QQSSSMT QPQMANLSNTP++GYQ PISN
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN

Query:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGDGWK+LEQMVLDFLQLPSCD                      PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG

A0A6J1E347 replication protein A 32 kDa subunit B-like isoform X12.8e-13588.81Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTG+ID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMT QPQMANLSNTP++GYQ PISN
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN

Query:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGDGWK+LEQMVLDFLQLPSCD                      PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG

A0A6J1JJ51 replication protein A 32 kDa subunit B2.1e-13588.81Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYGSQFDGNAAFSGGGFMPSQTT APDHS SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFV+DGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN
        CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMT QPQMANLSNTP++GYQ P+SN
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISN

Query:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG
        QYTGQAGGDGWK+LEQMVLDFLQLPSCD                      PAMKNLEEEGLIYSTTDDYHFKSTANG
Subjt:  QYTGQAGGDGWKSLEQMVLDFLQLPSCD----------------------PAMKNLEEEGLIYSTTDDYHFKSTANG

SwissProt top hitse value%identityAlignment
Q5Z8L1 Replication protein A 32 kDa subunit C4.7e-2333.81Show/hide
Query:  FSGGGFMPSQTTQAPDHSF-----------SPAKNRD--VQALLPLTVKQINDAF---LSSDDKSN--FVIDGVDVNNVKLVGMVRNRAGRITDVTFALD
        FSG   MPSQ + AP   +           SP+K RD      +P TV  I+ +F   L++D   +  F IDGV+  NV+++G V +   R TDV F LD
Subjt:  FSGGGFMPSQTTQAPDHSF-----------SPAKNRD--VQALLPLTVKQINDAF---LSSDDKSN--FVIDGVDVNNVKLVGMVRNRAGRITDVTFALD

Query:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHF--YNTRLRKQQSSSMTTQPQMANLSNTPM
        D TG+I   +W+ + +D+ +   I +G+YV+V  +L  FQ K+     SIRP+ ++NE+  HFIE ++VH     +++++Q   S+ T       S+  +
Subjt:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHF--YNTRLRKQQSSSMTTQPQMANLSNTPM

Query:  KGYQAPISNQ
        + YQ   + Q
Subjt:  KGYQAPISNQ

Q6H7J5 Replication protein A 32 kDa subunit B1.4e-4638.23Show/hide
Query:  GSQFDG-----NAAFSGGGFMPSQTTQAPDHSFSPA----KNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALD
        G  +DG     ++ F GGGFMPSQ T A + +        K+R+ QALLPLTVKQI DA  ++DDKSNF ++G++V+ V+LVG + N+  R+TDV+F LD
Subjt:  GSQFDG-----NAAFSGGGFMPSQTTQAPDHSFSPA----KNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALD

Query:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKG
        DGTGR+  ++W N++ D+ E+  I +G YV V+G LK FQGKR +  +S+R +T++N++T HF+  ++VH   TR + Q +++  T      +    M  
Subjt:  DGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKG

Query:  YQAPISNQYT----GQAGGDGWKSLEQMVLDFLQLPSCDPAMK---------------NLEEE------------GLIYSTTDDYHFKSTANG
         Q+P++NQ +     Q  G G   ++ +VL+       DPA+                NL EE            G +Y+T DD+H+KST NG
Subjt:  YQAPISNQYT----GQAGGDGWKSLEQMVLDFLQLPSCDPAMK---------------NLEEE------------GLIYSTTDDYHFKSTANG

Q6K9U2 Replication protein A 32 kDa subunit A3.7e-3636.73Show/hide
Query:  AFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDA---FLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNE
        AFS   F  SQ   A   S +P+K+R   + +PLTVKQI++A    ++ +  + FV+DGV+  NV+LVG+V  +  R TDV+F +DDGTGR+D  +WVN+
Subjt:  AFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDA---FLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNE

Query:  AADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSN---------TPMKGYQAPI
         ADS E   + +GMYV V G LK  Q ++    F+IRPVTDYNE+T HFI+ + +H  NT  + Q  S   T   M + S+         T +K   AP+
Subjt:  AADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSN---------TPMKGYQAPI

Query:  SNQYTG-----------------QAGGDGWKSLEQMVLDFLQLPSC--DPAMKNLEEEGLIYSTTDDYHFKSTAN
         +   G                     +    ++++V  F +LP      A+  L + G IYST D+ H+KS  N
Subjt:  SNQYTG-----------------QAGGDGWKSLEQMVLDFLQLPSC--DPAMKNLEEEGLIYSTTDDYHFKSTAN

Q8LFJ8 Replication protein A 32 kDa subunit B5.1e-6247.86Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYG  FDGNAAF+GGGFMPSQ T     S S  KNRDV+ LLPLT+KQ++ A  S+  +SNF IDGVD+  V +VG +     RIT V F +DDGTG +D
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLR--KQQSSSMTTQPQMA-NLSNTPMKGYQAP
        C +W +   ++ E+E +  GMYVR+HGHLK FQGKR++NVFS+RPVTD+NEI  HF E +YVH YNT+LR       + T +PQM  +   TP K YQ  
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLR--KQQSSSMTTQPQMA-NLSNTPMKGYQAP

Query:  ISNQYTGQAGGDGWKSLEQMVLDFLQLP---------SCD--------------PAMKNLEEEGLIYSTTDDYHFKSTAN
         SNQ+  Q   D    ++Q VL++L  P          CD               A++ L  +G IYST D+  FKSTAN
Subjt:  ISNQYTGQAGGDGWKSLEQMVLDFLQLP---------SCD--------------PAMKNLEEEGLIYSTTDDYHFKSTAN

Q9ZQ19 Replication protein A 32 kDa subunit A3.4e-5844.32Show/hide
Query:  SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS
        SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F SS +KS  VI+G+ + NV LVG+V ++   ++T+V F LDDGTGRIDC 
Subjt:  SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS

Query:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMT--TQPQMANLSNTPMKGYQAPISN
        +WV+E  D+ E+E + DG YVR+ GHLK+FQGK  L VFS+RP+ D+NE+T H+IE I+ +  N+  ++QQ   +T          SNT       P+ +
Subjt:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMT--TQPQMANLSNTPMKGYQAPISN

Query:  QYTGQAGGDGWKSLEQMVLDFLQLPSC-----------------------DPAMKNLEEEGLIYSTTDDYHFK
               G+G K+L+ M+LD+L+ P+C                       +  +++LE +GLIYST D+YHFK
Subjt:  QYTGQAGGDGWKSLEQMVLDFLQLPSC-----------------------DPAMKNLEEEGLIYSTTDDYHFK

Arabidopsis top hitse value%identityAlignment
AT2G24490.1 replicon protein A22.4e-5944.32Show/hide
Query:  SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS
        SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F SS +KS  VI+G+ + NV LVG+V ++   ++T+V F LDDGTGRIDC 
Subjt:  SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS

Query:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMT--TQPQMANLSNTPMKGYQAPISN
        +WV+E  D+ E+E + DG YVR+ GHLK+FQGK  L VFS+RP+ D+NE+T H+IE I+ +  N+  ++QQ   +T          SNT       P+ +
Subjt:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMT--TQPQMANLSNTPMKGYQAPISN

Query:  QYTGQAGGDGWKSLEQMVLDFLQLPSC-----------------------DPAMKNLEEEGLIYSTTDDYHFK
               G+G K+L+ M+LD+L+ P+C                       +  +++LE +GLIYST D+YHFK
Subjt:  QYTGQAGGDGWKSLEQMVLDFLQLPSC-----------------------DPAMKNLEEEGLIYSTTDDYHFK

AT2G24490.2 replicon protein A22.4e-5944.32Show/hide
Query:  SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS
        SQF+ N+ FSGGGFM SQ +QA + S S AKNRD Q L+P+TVKQI + F SS +KS  VI+G+ + NV LVG+V ++   ++T+V F LDDGTGRIDC 
Subjt:  SQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNR-AGRITDVTFALDDGTGRIDCS

Query:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMT--TQPQMANLSNTPMKGYQAPISN
        +WV+E  D+ E+E + DG YVR+ GHLK+FQGK  L VFS+RP+ D+NE+T H+IE I+ +  N+  ++QQ   +T          SNT       P+ +
Subjt:  KWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMT--TQPQMANLSNTPMKGYQAPISN

Query:  QYTGQAGGDGWKSLEQMVLDFLQLPSC-----------------------DPAMKNLEEEGLIYSTTDDYHFK
               G+G K+L+ M+LD+L+ P+C                       +  +++LE +GLIYST D+YHFK
Subjt:  QYTGQAGGDGWKSLEQMVLDFLQLPSC-----------------------DPAMKNLEEEGLIYSTTDDYHFK

AT3G02920.1 Replication protein A, subunit RPA323.7e-6347.86Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID
        MYG  FDGNAAF+GGGFMPSQ T     S S  KNRDV+ LLPLT+KQ++ A  S+  +SNF IDGVD+  V +VG +     RIT V F +DDGTG +D
Subjt:  MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRID

Query:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLR--KQQSSSMTTQPQMA-NLSNTPMKGYQAP
        C +W +   ++ E+E +  GMYVR+HGHLK FQGKR++NVFS+RPVTD+NEI  HF E +YVH YNT+LR       + T +PQM  +   TP K YQ  
Subjt:  CSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLR--KQQSSSMTTQPQMA-NLSNTPMKGYQAP

Query:  ISNQYTGQAGGDGWKSLEQMVLDFLQLP---------SCD--------------PAMKNLEEEGLIYSTTDDYHFKSTAN
         SNQ+  Q   D    ++Q VL++L  P          CD               A++ L  +G IYST D+  FKSTAN
Subjt:  ISNQYTGQAGGDGWKSLEQMVLDFLQLP---------SCD--------------PAMKNLEEEGLIYSTTDDYHFKSTAN

AT3G02920.2 Replication protein A, subunit RPA326.4e-6045.33Show/hide
Query:  MYGSQFDGNAAFSGGGFMPSQ-TTQAPDHSF-------------------SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRN
        MYG  FDGNAAF+GGGFMPSQ TTQA + S                    S  +NRDV+ LLPLT+KQ++ A  S+  +SNF IDGVD+  V +VG +  
Subjt:  MYGSQFDGNAAFSGGGFMPSQ-TTQAPDHSF-------------------SPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRN

Query:  RAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLR--KQQSSSMT
           RIT V F +DDGTG +DC +W +   ++ E+E +  GMYVR+HGHLK FQGKR++NVFS+RPVTD+NEI  HF E +YVH YNT+LR       + T
Subjt:  RAGRITDVTFALDDGTGRIDCSKWVNEAADSNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLR--KQQSSSMT

Query:  TQPQMA-NLSNTPMKGYQAPISNQYTGQAGGDGWKSLEQMVLDFLQLP---------SCD--------------PAMKNLEEEGLIYSTTDDYHFKSTAN
         +PQM  +   TP K YQ   SNQ+  Q   D    ++Q VL++L  P          CD               A++ L  +G IYST D+  FKSTAN
Subjt:  TQPQMA-NLSNTPMKGYQAPISNQYTGQAGGDGWKSLEQMVLDFLQLP---------SCD--------------PAMKNLEEEGLIYSTTDDYHFKSTAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGAAGTCAATTCGATGGCAACGCTGCCTTCTCCGGTGGCGGATTCATGCCATCTCAGACCACCCAGGCCCCTGATCACTCATTCTCTCCGGCGAAAAATCGAGA
TGTCCAGGCATTGCTTCCATTAACAGTGAAGCAGATAAACGACGCATTTCTGTCTAGTGATGATAAATCAAATTTTGTTATTGATGGTGTTGATGTTAACAATGTTAAGC
TCGTAGGAATGGTGCGCAATAGAGCAGGAAGAATTACTGATGTGACTTTTGCACTGGACGATGGCACCGGACGGATTGACTGTAGCAAATGGGTCAATGAAGCTGCAGAT
TCAAATGAAGTTGAGGGAATATTGGATGGCATGTATGTCCGGGTCCATGGCCACTTAAAGAGCTTCCAGGGTAAAAGAACTTTGAATGTCTTTTCTATCAGGCCTGTGAC
AGACTACAATGAGATCACAAGTCACTTCATCGAATCCATATATGTTCATTTTTACAACACCAGATTACGGAAACAACAAAGTAGTAGTATGACTACTCAGCCACAGATGG
CAAATTTATCTAATACGCCTATGAAAGGATATCAAGCTCCCATTTCAAATCAATACACTGGTCAAGCAGGCGGTGATGGTTGGAAGAGCCTTGAGCAGATGGTCTTAGAT
TTCTTGCAACTTCCTTCATGCGATCCCGCGATGAAAAATCTAGAAGAGGAAGGTCTAATCTACTCTACAACTGATGATTATCACTTCAAATCAACCGCCAACGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGGAAGTCAATTCGATGGCAACGCTGCCTTCTCCGGTGGCGGATTCATGCCATCTCAGACCACCCAGGCCCCTGATCACTCATTCTCTCCGGCGAAAAATCGAGA
TGTCCAGGCATTGCTTCCATTAACAGTGAAGCAGATAAACGACGCATTTCTGTCTAGTGATGATAAATCAAATTTTGTTATTGATGGTGTTGATGTTAACAATGTTAAGC
TCGTAGGAATGGTGCGCAATAGAGCAGGAAGAATTACTGATGTGACTTTTGCACTGGACGATGGCACCGGACGGATTGACTGTAGCAAATGGGTCAATGAAGCTGCAGAT
TCAAATGAAGTTGAGGGAATATTGGATGGCATGTATGTCCGGGTCCATGGCCACTTAAAGAGCTTCCAGGGTAAAAGAACTTTGAATGTCTTTTCTATCAGGCCTGTGAC
AGACTACAATGAGATCACAAGTCACTTCATCGAATCCATATATGTTCATTTTTACAACACCAGATTACGGAAACAACAAAGTAGTAGTATGACTACTCAGCCACAGATGG
CAAATTTATCTAATACGCCTATGAAAGGATATCAAGCTCCCATTTCAAATCAATACACTGGTCAAGCAGGCGGTGATGGTTGGAAGAGCCTTGAGCAGATGGTCTTAGAT
TTCTTGCAACTTCCTTCATGCGATCCCGCGATGAAAAATCTAGAAGAGGAAGGTCTAATCTACTCTACAACTGATGATTATCACTTCAAATCAACCGCCAACGGTTGA
Protein sequenceShow/hide protein sequence
MYGSQFDGNAAFSGGGFMPSQTTQAPDHSFSPAKNRDVQALLPLTVKQINDAFLSSDDKSNFVIDGVDVNNVKLVGMVRNRAGRITDVTFALDDGTGRIDCSKWVNEAAD
SNEVEGILDGMYVRVHGHLKSFQGKRTLNVFSIRPVTDYNEITSHFIESIYVHFYNTRLRKQQSSSMTTQPQMANLSNTPMKGYQAPISNQYTGQAGGDGWKSLEQMVLD
FLQLPSCDPAMKNLEEEGLIYSTTDDYHFKSTANG