; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008280 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008280
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionU4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein
Genome locationChr10:21519834..21520538
RNA-Seq ExpressionHG10008280
SyntenyHG10008280
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0008380 - RNA splicing (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR013957 - U4/U6.U5 small nuclear ribonucleoprotein 27kDa protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587747.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]1.9e-9288.89Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDR+KDRERDRDHRERDR          +RDR+RERRRD+EDRDRERERGRSKRSHTPDR RSRHTRSRTRS DRHR+RSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SR+PEDRSLRRRHRSPSPEHARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKDSVG  EVVEEA+ADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

KAG6589703.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]3.4e-9490.6Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDR+ DRERDRD+RERDRRRDRED     RDRDRERRR+++DRD ERERGR KRSHTP+R RSRHTRSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDRSLRRRHRSPSP+H RKRHRRDLTADDEK+RQKAVSDFVDGIAKEQHKQKNNKDSVG GE VEEAMADEDEIEMMKKLGIPVGFDSTKGKPV G
Subjt:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

XP_004146322.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis sativus]2.3e-9894.02Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDR+KDRERDRDHRERDRRRDREDRDH ERDRDRERRRDQ+DRDRERERGRSKRS TPDR+RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDR  RRRHRSPSP+HARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKD+VG GEVVEEAMADEDE+EMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAER+R
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

XP_008453595.1 PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo]7.2e-10094.87Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDR+KDRERDRDHRERDRRRDREDRDH ERDRDRERRRD +DRDRERERGRSKRSHTPDR+RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDRS RRRHRSPSP+HARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKD+ G GEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

XP_023530476.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo]3.8e-9388.89Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDR+KDRERDRDHRERDR          +RDR+RERRRD+EDRDRERERGRSKRSHTPDR RSRHTRSRTRSPDRHR+RSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SR+PEDRSLRRRHRSPSPEHARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKD VG  EVVEEA+ADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

TrEMBL top hitse value%identityAlignment
A0A0A0LU61 SNRNP27 domain-containing protein1.1e-9894.02Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDR+KDRERDRDHRERDRRRDREDRDH ERDRDRERRRDQ+DRDRERERGRSKRS TPDR+RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDR  RRRHRSPSP+HARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKD+VG GEVVEEAMADEDE+EMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAER+R
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

A0A1S3BW27 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein3.5e-10094.87Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDR+KDRERDRDHRERDRRRDREDRDH ERDRDRERRRD +DRDRERERGRSKRSHTPDR+RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDRS RRRHRSPSP+HARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKD+ G GEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

A0A5D3CK71 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein3.5e-10094.87Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDR+KDRERDRDHRERDRRRDREDRDH ERDRDRERRRD +DRDRERERGRSKRSHTPDR+RSR  RSRTRSPDRHRSRSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SRTPEDRS RRRHRSPSP+HARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKD+ G GEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

A0A6J1EW85 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like3.5e-9288.46Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDR+KDRERDRDHRERD            RDR+RERRRD+EDRDRERERGRSKRSHTPDR RSRHTRSRTRS DRHR+RSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SR+PEDRSLRRRHRSPSPEHARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKDSVG  EVVEEA+ADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

A0A6J1L1Y6 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like1.6e-9288.03Show/hide
Query:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL
        MVDRERDRDRGRDRDKDRDRDR+KDRERDRDHRERDR          +RDR+RERRRD++DRDRERERGRSKRSHTPDR RSRHTRSRTRSPD+HR+RSL
Subjt:  MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSL

Query:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG
        SR+PEDRSLRRRHRSPSPEHARKRHRRDLT DD+KERQK VSDFVDGIAKEQHKQK NKD VG  EVVEEA+ADEDEIEMMKKLGIPVGFDSTKGKPVPG
Subjt:  SRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPG

Query:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        ADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Subjt:  ADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR

SwissProt top hitse value%identityAlignment
Q6DDA4 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein2.8e-0638.86Show/hide
Query:  RRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKE
        R R R      ER R R   R++E R RER R R +R            RSR+RSP R RSRS           RRHRS S    R + RRD   DD+K+
Subjt:  RRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKE

Query:  RQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
         +++       IA E  + K                  E+EIEMMK +G    FD++KGK V G+ +   + V  KR+ RQYMNR+GGFNRPL
Subjt:  RQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Q6DH74 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein4.1e-0540.69Show/hide
Query:  RERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPEHARKRH
        R R R    R+RRR R         RDRERRR      RERER RS+     DR R    RSR+RSP R RSRS           RRHRS S    R++ 
Subjt:  RERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPEHARKRH

Query:  RRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGF
        RRD    D KE+   V      I+ E  + K                  E+EIEMMK +G    F+++KGK   G+     V V  KR+ RQYMNR+GGF
Subjt:  RRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGF

Query:  NRPL
        NRPL
Subjt:  NRPL

Q6GLZ8 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein2.8e-0640.41Show/hide
Query:  RRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKE
        R R R      ER R R   R++E R RER R R +R            RSR+RSP R RSRS           RRHRS S   +R + RRD   DD+KE
Subjt:  RRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPEHARKRHRRDLTADDEKE

Query:  RQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
         +++      G +KE  +Q   +D  G           E+EIEMMK +G    FDS+KGK   G+ +   + V  KR+ RQYMNR+GGFNRPL
Subjt:  RQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Q8K194 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein1.3e-0840.61Show/hide
Query:  RERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPEHARKRHRRDLTAD
        R R R   RE R      RDRERRR +  R RER+R                 RSR+RSP R RSRS           RRHRS SP  +R + RR    D
Subjt:  RERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPEHARKRHRRDLTAD

Query:  DEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
        +EK+  K +        K + +Q   +D  G           E+EIEMMK +G    FDSTKGK V G+ +   + V  KR+ RQYMNR+GGFNRPL
Subjt:  DEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Q8WVK2 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein1.1e-0740.1Show/hide
Query:  RERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPEHARKRHRRDLTAD
        R R R   RE R      R+RERRR +  R RER+R                 RSR+RSP R RSRS           RRHRS SP  +R + RR    D
Subjt:  RERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPEHARKRHRRDLTAD

Query:  DEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL
        +EK+  K          K + +Q   +D  G           E+EIEMMK +G    FDSTKGK V G+ +   + V  KR+ RQYMNR+GGFNRPL
Subjt:  DEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL

Arabidopsis top hitse value%identityAlignment
AT5G57370.1 unknown protein1.3e-3556.22Show/hide
Query:  DRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERE-RGRSKRSHTPD-RARSRHTRSRTRSPDRHRSRSLS---RTPEDR
        +RD+ R+R+R KDRE D     RDRRR R+DRD   RDRDR+R RD+E RDR+R  R +  RS TPD  AR+RH     RSP+R+RSRS S       DR
Subjt:  DRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERE-RGRSKRSHTPD-RARSRHTRSRTRSPDRHRSRSLS---RTPEDR

Query:  SLRRRHRSPSPEHARKRHRRDLTADDEKE--RQKAVSDFVD----GIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA
            R RSPSP+   ++  R  + DDEKE  R++ V+D VD     I K++ KQ ++    G GE  +E   D +EIEMMK LGIP GFDSTKGKPV GA
Subjt:  SLRRRHRSPSPEHARKRHRRDLTADDEKE--RQKAVSDFVD----GIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA

Query:  DVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
        DVSG+R VTKRQPRQYMNRRGGFNRPLPAER R
Subjt:  DVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGACCGTGAACGAGATAGAGATAGAGGCCGCGACAGAGATAAAGATCGGGACCGTGATAGACACAAAGACCGGGAGCGAGACCGTGACCATCGCGAACGTGACCG
GCGTAGGGATCGAGAAGATCGTGACCACAGTGAACGTGATCGGGACCGGGAACGGCGTAGGGATCAAGAAGATCGTGACCGTGAAAGGGAGCGTGGCCGGAGTAAAAGGT
CGCACACTCCCGACCGCGCCAGATCCCGCCACACACGCTCTCGCACCCGCTCGCCGGACCGGCACCGATCGAGGTCTCTTTCTCGTACTCCTGAGGACCGGTCCCTTCGC
CGCCGCCATCGTTCGCCCTCCCCGGAACATGCTCGGAAGCGTCATCGCCGGGATTTGACTGCTGACGATGAAAAGGAGCGGCAGAAAGCAGTTTCTGACTTCGTTGATGG
CATTGCGAAGGAGCAGCACAAGCAGAAGAATAATAAAGATAGCGTTGGTGACGGAGAAGTAGTGGAGGAGGCCATGGCTGATGAGGATGAAATTGAGATGATGAAGAAAC
TAGGTATTCCCGTCGGTTTCGATTCGACCAAGGGCAAACCTGTTCCAGGTGCTGATGTGAGTGGCGTTAGGGTAGTGACCAAGAGGCAGCCTAGGCAATACATGAATCGT
CGTGGCGGGTTCAACCGGCCGTTGCCGGCCGAGCGGACTCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGACCGTGAACGAGATAGAGATAGAGGCCGCGACAGAGATAAAGATCGGGACCGTGATAGACACAAAGACCGGGAGCGAGACCGTGACCATCGCGAACGTGACCG
GCGTAGGGATCGAGAAGATCGTGACCACAGTGAACGTGATCGGGACCGGGAACGGCGTAGGGATCAAGAAGATCGTGACCGTGAAAGGGAGCGTGGCCGGAGTAAAAGGT
CGCACACTCCCGACCGCGCCAGATCCCGCCACACACGCTCTCGCACCCGCTCGCCGGACCGGCACCGATCGAGGTCTCTTTCTCGTACTCCTGAGGACCGGTCCCTTCGC
CGCCGCCATCGTTCGCCCTCCCCGGAACATGCTCGGAAGCGTCATCGCCGGGATTTGACTGCTGACGATGAAAAGGAGCGGCAGAAAGCAGTTTCTGACTTCGTTGATGG
CATTGCGAAGGAGCAGCACAAGCAGAAGAATAATAAAGATAGCGTTGGTGACGGAGAAGTAGTGGAGGAGGCCATGGCTGATGAGGATGAAATTGAGATGATGAAGAAAC
TAGGTATTCCCGTCGGTTTCGATTCGACCAAGGGCAAACCTGTTCCAGGTGCTGATGTGAGTGGCGTTAGGGTAGTGACCAAGAGGCAGCCTAGGCAATACATGAATCGT
CGTGGCGGGTTCAACCGGCCGTTGCCGGCCGAGCGGACTCGGTAG
Protein sequenceShow/hide protein sequence
MVDRERDRDRGRDRDKDRDRDRHKDRERDRDHRERDRRRDREDRDHSERDRDRERRRDQEDRDRERERGRSKRSHTPDRARSRHTRSRTRSPDRHRSRSLSRTPEDRSLR
RRHRSPSPEHARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGDGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNR
RGGFNRPLPAERTR