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HG10008312 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008312
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransmembrane protein 230
Genome locationChr10:21909749..21910143
RNA-Seq ExpressionHG10008312
SyntenyHG10008312
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005776 - autophagosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008590 - Transmembrane protein 230/134
IPR044234 - Transmembrane protein 230


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021684.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]2.8e-4897.09Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGIVVG FM SNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_004146339.1 transmembrane protein 230 [Cucumis sativus]2.1e-4896.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGI+VGAFM SNRVGGDR HGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_008453547.1 PREDICTED: transmembrane protein 230-like [Cucumis melo]7.4e-4997.09Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGI+VGAFM SNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_022931504.1 transmembrane protein 230-like [Cucurbita moschata]3.7e-4896.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGI+VG FM SNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_038879685.1 transmembrane protein 230 [Benincasa hispida]1.9e-4999.03Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFM SNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

TrEMBL top hitse value%identityAlignment
A0A0A0LUC1 Transmembrane protein 2301.0e-4896.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGI+VGAFM SNRVGGDR HGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A1S3BWL2 Transmembrane protein 2303.6e-4997.09Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGI+VGAFM SNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1EUE9 Transmembrane protein 2301.8e-4896.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGI+VG FM SNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1I4W8 Transmembrane protein 2301.8e-4896.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLL FGMIGI+VG FM SNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1JDX9 Transmembrane protein 2305.2e-4896.12Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI DEDI+MDSPF VNNRPPIKEIALAVSLLVFGMIGIVVGAFM SNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

SwissProt top hitse value%identityAlignment
Q5BJP5 Transmembrane protein 2301.4e-1046.75Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMPSNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMPSNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q5R8X3 Transmembrane protein 2308.3e-1146.75Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMPSNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMPSNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q5ZLH4 Transmembrane protein 2308.3e-1148.05Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMPSNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALAV L + G   I++GA + +  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMPSNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q8CIB6 Transmembrane protein 2301.4e-1046.75Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMPSNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMPSNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Q96A57 Transmembrane protein 2301.4e-1046.75Show/hide
Query:  PIKEIALAVSLLVFGMIGIVVGAFMPSNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        P K IALA  L + G   I++G+ + S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KGY+G+S+ +IP
Subjt:  PIKEIALAVSLLVFGMIGIVVGAFMPSNRV---GGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

Arabidopsis top hitse value%identityAlignment
AT2G19350.1 Eukaryotic protein of unknown function (DUF872)1.1e-4277.67Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSI+DED+M+ + +TV+NRPP+KEI+LAV LLVFG +GIV+G FM  NRVGGDR HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        P V
Subjt:  PPV

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)1.7e-1144.16Show/hide
Query:  NRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP
        +R P K IALAV LL  G + +++  F+    + GD + G    +LG L F+PGFY TRIAYY+++G +G+ F+ IP
Subjt:  NRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIP

AT4G29850.1 Eukaryotic protein of unknown function (DUF872)2.4e-4582.52Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI
        MAYVDHAFSITDEDIM+++ +TVNNRPP+KEIALAV+LLVFG +GIV G FM  NRVGGDR HG+FF +LG LLFIPGFYYTRIAYYAYKGYKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTATGTGGATCATGCGTTTTCGATAACAGACGAAGACATTATGATGGATTCTCCGTTCACCGTCAACAATCGGCCACCTATCAAGGAGATCGCTCTTGCCGTTTC
TCTTCTCGTTTTCGGCATGATTGGAATTGTCGTTGGTGCTTTCATGCCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTTTTCTCGTTGTTGGGAGCTCTCT
TGTTTATTCCAGGTTTCTATTACACAAGGATTGCCTACTATGCTTATAAGGGTTACAAGGGCTTCTCTTTTTCCAACATACCCCCTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTATGTGGATCATGCGTTTTCGATAACAGACGAAGACATTATGATGGATTCTCCGTTCACCGTCAACAATCGGCCACCTATCAAGGAGATCGCTCTTGCCGTTTC
TCTTCTCGTTTTCGGCATGATTGGAATTGTCGTTGGTGCTTTCATGCCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTTTTCTCGTTGTTGGGAGCTCTCT
TGTTTATTCCAGGTTTCTATTACACAAGGATTGCCTACTATGCTTATAAGGGTTACAAGGGCTTCTCTTTTTCCAACATACCCCCTGTTTAA
Protein sequenceShow/hide protein sequence
MAYVDHAFSITDEDIMMDSPFTVNNRPPIKEIALAVSLLVFGMIGIVVGAFMPSNRVGGDRAHGVFFSLLGALLFIPGFYYTRIAYYAYKGYKGFSFSNIPPV