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HG10008351 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008351
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTetratricopeptide repeat protein 27-like protein
Genome locationChr10:22453691..22453996
RNA-Seq ExpressionHG10008351
SyntenyHG10008351
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021672.1 Tetratricopeptide repeat protein 27-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-1764.86Show/hide
Query:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQT-IYFCLRLLNFSID
        +   R +QGSDLWKDKD+F+KFA+ASLEL RV+MHI +TTNSQ++L A EMHLKNTVKQ  ++  LR + FSID
Subjt:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQT-IYFCLRLLNFSID
TYJ98349.1 tetratricopeptide repeat protein 27-like protein [Cucumis melo var. makuwa]2.8e-1658.54Show/hide
Query:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYFC----LRLLNFSIDDCKKY
        +   R +QGSDLWKD++KF+KFA+ASLELSRV+MHI ST NSQ++L A EMHLKNTVKQ + F      R L   +D+ K Y
Subjt:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYFC----LRLLNFSIDDCKKY
XP_011650024.1 tetratricopeptide repeat protein 27 homolog isoform X2 [Cucumis sativus]4.7e-1660Show/hide
Query:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYFCLRLLNFSIDDC
        +   R +QGSDLWKD++KF+KFA+ASLELSRV+MHI ST NSQ++L A EMHLKNTVKQ + F        ++DC
Subjt:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYFCLRLLNFSIDDC
XP_031736747.1 tetratricopeptide repeat protein 27 homolog isoform X1 [Cucumis sativus]4.7e-1660Show/hide
Query:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYFCLRLLNFSIDDC
        +   R +QGSDLWKD++KF+KFA+ASLELSRV+MHI ST NSQ++L A EMHLKNTVKQ + F        ++DC
Subjt:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYFCLRLLNFSIDDC
XP_038879571.1 tetratricopeptide repeat protein 27 homolog [Benincasa hispida]4.7e-1668.25Show/hide
Query:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYF
        +   R +QGSDLWKDKDKF+KFA+ASLEL RV+MH+ STTNSQ++L   EMHLKNTVKQ + F
Subjt:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYF
TrEMBL top hitse value%identityAlignment
A0A0A0LQK0 TPR_REGION domain-containing protein2.3e-1660Show/hide
Query:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYFCLRLLNFSIDDC
        +   R +QGSDLWKD++KF+KFA+ASLELSRV+MHI ST NSQ++L A EMHLKNTVKQ + F        ++DC
Subjt:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYFCLRLLNFSIDDC
A0A1S3C1C8 tetratricopeptide repeat protein 27 homolog6.7e-1668.25Show/hide
Query:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYF
        +   R +QGSDLWKD++KF+KFA+ASLELSRV+MHI ST NSQ++L A EMHLKNTVKQ + F
Subjt:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYF
A0A5D3BH33 Tetratricopeptide repeat protein 27-like protein1.3e-1658.54Show/hide
Query:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYFC----LRLLNFSIDDCKKY
        +   R +QGSDLWKD++KF+KFA+ASLELSRV+MHI ST NSQ++L A EMHLKNTVKQ + F      R L   +D+ K Y
Subjt:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYFC----LRLLNFSIDDCKKY
A0A6J1EWM5 tetratricopeptide repeat protein 27 homolog1.1e-1566.67Show/hide
Query:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYF
        +   R +QGSDLWKDKD+F+KFA+ASLEL RV+MHI +TT+SQ++L A EMHLKNTVKQ + F
Subjt:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYF
A0A6J1KU59 tetratricopeptide repeat protein 27 homolog3.0e-1668.25Show/hide
Query:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYF
        +   R +QGSDLWKDKD+F+KFA+ASLEL RV+MHI +TTNSQ++L A EMHLKNTVKQ + F
Subjt:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G17270.1 Protein prenylyltransferase superfamily protein2.8e-1455.93Show/hide
Query:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQ
        +   R +QGS++WKDK++F KFARASLEL RV+M I ++  S+++L   EMHLKNT+KQ
Subjt:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQ
AT5G37130.1 Protein prenylyltransferase superfamily protein1.2e-1250.85Show/hide
Query:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQ
        +   R + G ++WKDK++F KFARASLEL RV++ I ++  S+++L + EMHLKNT+KQ
Subjt:  INHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTAGGTGTCCTTATGTTTGACGTGTTTTCAAAAACATATGTCAAGAAATTACCATTGGGATCAATTAATCATACTCGACCTTTTCAAGGTTCTGATCTTTGGAA
AGATAAGGATAAGTTCATGAAGTTTGCACGAGCTTCATTAGAACTTAGCAGGGTCTTCATGCATATACCATCAACTACGAATAGTCAGCAAAAACTATCTGCAGTTGAGA
TGCACCTAAAAAACACAGTAAAACAGACAATATATTTTTGTTTAAGACTGCTTAACTTTTCCATTGATGATTGCAAGAAGTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTAGGTGTCCTTATGTTTGACGTGTTTTCAAAAACATATGTCAAGAAATTACCATTGGGATCAATTAATCATACTCGACCTTTTCAAGGTTCTGATCTTTGGAA
AGATAAGGATAAGTTCATGAAGTTTGCACGAGCTTCATTAGAACTTAGCAGGGTCTTCATGCATATACCATCAACTACGAATAGTCAGCAAAAACTATCTGCAGTTGAGA
TGCACCTAAAAAACACAGTAAAACAGACAATATATTTTTGTTTAAGACTGCTTAACTTTTCCATTGATGATTGCAAGAAGTACTAG
Protein sequenceShow/hide protein sequence
MALGVLMFDVFSKTYVKKLPLGSINHTRPFQGSDLWKDKDKFMKFARASLELSRVFMHIPSTTNSQQKLSAVEMHLKNTVKQTIYFCLRLLNFSIDDCKKY