; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008388 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008388
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionHomeobox domain-containing protein
Genome locationChr10:22770254..22771039
RNA-Seq ExpressionHG10008388
SyntenyHG10008388
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0099402 - plant organ development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587685.1 WUSCHEL-related homeobox 1, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1659.42Show/hide
Query:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYHFEFIKSNTGSSELIKMESNG
        MWTLG+DDNG +FCFS+ F+G RKLRPLVPRPLPSLR N AN  S YYH   + ++    EL+  + NG
Subjt:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYHFEFIKSNTGSSELIKMESNG

XP_022933520.1 WUSCHEL-related homeobox 1-like isoform X1 [Cucurbita moschata]2.9e-1659.42Show/hide
Query:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYHFEFIKSNTGSSELIKMESNG
        MWTLG+DDNG +FCFS+ F+G RKLRPLVPRPLPSLR N AN  S YYH   + ++    EL+  + NG
Subjt:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYHFEFIKSNTGSSELIKMESNG

XP_023003759.1 WUSCHEL-related homeobox 1-like [Cucurbita maxima]1.7e-1660.87Show/hide
Query:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYHFEFIKSNTGSSELIKMESNG
        MWTLG+DDNG EFCFS+ F+G RKLRPLVPRPLPSLR N AN  SQYYH   + ++    EL+  + +G
Subjt:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYHFEFIKSNTGSSELIKMESNG

XP_023531667.1 WUSCHEL-related homeobox 1-like [Cucurbita pepo subsp. pepo]2.2e-1659.42Show/hide
Query:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYHFEFIKSNTGSSELIKMESNG
        MWTLG+DDNG +FCFS+ F+G RKLRPLVPRPLPSLR N AN   QYYH   + ++    EL+  + NG
Subjt:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYHFEFIKSNTGSSELIKMESNG

XP_038878764.1 WUSCHEL-related homeobox 1 [Benincasa hispida]1.6e-1966.2Show/hide
Query:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYHFEFIKSNTGSSELIKMESNGGA
        MWTLGYDDNGGEFCFSE F+G RKLRPLVPRPLPSLR NGAN SSQYYH   + +     EL+  E +  +
Subjt:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYHFEFIKSNTGSSELIKMESNGGA

TrEMBL top hitse value%identityAlignment
A0A0A0LSV4 Homeobox domain-containing protein2.6e-1583.02Show/hide
Query:  MWTLGYDDNGGEFCFSE--TFNGSRKLRPLVPRPLPSLRANG--ANFSSQYYH
        MWTLGYDDNGGEFCFSE   F+G+RKLRPLVPRPL SLRANG   NFSSQYYH
Subjt:  MWTLGYDDNGGEFCFSE--TFNGSRKLRPLVPRPLPSLRANG--ANFSSQYYH

A0A6J1BZR8 WUSCHEL-related homeobox 11.8e-1669.57Show/hide
Query:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLP-SLRANGANFSSQYYHFEFIKSNTGSSELIKMESN
        MWTLGYDDNGGEF FSE FNG RKLRPLVPRPLP SLR NGANF +QYYH   + S    +E  K E N
Subjt:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLP-SLRANGANFSSQYYHFEFIKSNTGSSELIKMESN

A0A6J1EZA1 WUSCHEL-related homeobox 1-like isoform X21.3e-1475.51Show/hide
Query:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYH
        MWTLG+DDNG +FCFS+ F+G RKLRPLVPRPLPSLR N AN  S YYH
Subjt:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYH

A0A6J1F538 WUSCHEL-related homeobox 1-like isoform X11.4e-1659.42Show/hide
Query:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYHFEFIKSNTGSSELIKMESNG
        MWTLG+DDNG +FCFS+ F+G RKLRPLVPRPLPSLR N AN  S YYH   + ++    EL+  + NG
Subjt:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYHFEFIKSNTGSSELIKMESNG

A0A6J1KU86 WUSCHEL-related homeobox 1-like8.1e-1760.87Show/hide
Query:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYHFEFIKSNTGSSELIKMESNG
        MWTLG+DDNG EFCFS+ F+G RKLRPLVPRPLPSLR N AN  SQYYH   + ++    EL+  + +G
Subjt:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYHFEFIKSNTGSSELIKMESNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G18010.1 WUSCHEL related homeobox 11.2e-0444.68Show/hide
Query:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQY
        MWT+GY++ G     +++FNG RKLRPL+PR L S      N +S +
Subjt:  MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGACGTTGGGTTATGATGACAATGGCGGAGAATTTTGCTTCTCCGAAACCTTTAATGGCAGTCGCAAGCTTCGGCCTCTCGTCCCTCGCCCTTTGCCTTCC
CTTCGTGCCAATGGCGCTAACTTCTCTTCTCAATATTACCATTTCGAGTTCATCAAGTCCAACACCGGTAGTAGTGAGCTCATCAAGATGGAATCCAACGGCGGA
GCAGTTGAGAATTTTGGAGGAGCTTTACCGGCGAGGGACAAGAACGCCGTCCGCCGACCAAATCCAACATATCACCGCCCAACTCCGCCGTTACGGCCAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGACGTTGGGTTATGATGACAATGGCGGAGAATTTTGCTTCTCCGAAACCTTTAATGGCAGTCGCAAGCTTCGGCCTCTCGTCCCTCGCCCTTTGCCTTCC
CTTCGTGCCAATGGCGCTAACTTCTCTTCTCAATATTACCATTTCGAGTTCATCAAGTCCAACACCGGTAGTAGTGAGCTCATCAAGATGGAATCCAACGGCGGA
GCAGTTGAGAATTTTGGAGGAGCTTTACCGGCGAGGGACAAGAACGCCGTCCGCCGACCAAATCCAACATATCACCGCCCAACTCCGCCGTTACGGCCAAAATAG
Protein sequenceShow/hide protein sequence
MWTLGYDDNGGEFCFSETFNGSRKLRPLVPRPLPSLRANGANFSSQYYHFEFIKSNTGSSELIKMESNGGAVENFGGALPARDKNAVRRPNPTYHRPTPPLRPK