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HG10008399 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008399
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr10:22855345..22855683
RNA-Seq ExpressionHG10008399
SyntenyHG10008399
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7594247.1 hypothetical protein ISN45_Aa01g030160 [Arabidopsis thaliana x Arabidopsis arenosa]2.7e-0446.81Show/hide
Query:  AGWTPPFLNGWKLNIVVAWDPISQFRGVGWVLQDHLGRVCLAGLNSF
        +GW+PP LN +K NI ++W   ++F G  WVL+DHLG+V L    +F
Subjt:  AGWTPPFLNGWKLNIVVAWDPISQFRGVGWVLQDHLGRVCLAGLNSF

KAG7599575.1 Ribonuclease H domain [Arabidopsis suecica]2.7e-0446.81Show/hide
Query:  AGWTPPFLNGWKLNIVVAWDPISQFRGVGWVLQDHLGRVCLAGLNSF
        +GW+PP LN +K NI ++W   ++F G  WVL+DHLG+V L    +F
Subjt:  AGWTPPFLNGWKLNIVVAWDPISQFRGVGWVLQDHLGRVCLAGLNSF

XP_020885936.1 uncharacterized protein LOC110229659 [Arabidopsis lyrata subsp. lyrata]4.6e-0447.83Show/hide
Query:  GWTPPFLNGWKLNIVVAWDPISQFRGVGWVLQDHLGRVCLAGLNSF
        GW+PP LN +K NI ++W   ++F G  WVL+DHLG+V L    +F
Subjt:  GWTPPFLNGWKLNIVVAWDPISQFRGVGWVLQDHLGRVCLAGLNSF

XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]4.6e-0435.63Show/hide
Query:  LVNAGWTPPFLNGWKLNIVVAWDPISQFRGVGWVLQDHLGRVCLAGLNSFNSK----VIEAMTICEGLKNICSISVRHIGVESDLFE
        ++   W+ P  N WKLN   +W    +  G+GW+L D  G + LAG      K     +E MTI  GL+ I   S   I +ESD  E
Subjt:  LVNAGWTPPFLNGWKLNIVVAWDPISQFRGVGWVLQDHLGRVCLAGLNSFNSK----VIEAMTICEGLKNICSISVRHIGVESDLFE

XP_038886170.1 uncharacterized protein LOC120076417 [Benincasa hispida]3.1e-0842.17Show/hide
Query:  GWTPPFLNGWKLNIVVAWDPISQFRGVGWVLQDHLGRVCLAGLNSF----NSKVIEAMTICEGLKNICSISVRHIGVESDLFE
        GW P     WKLN+  +W+      G+GWV  DHL RVC+AGL          ++EA+ IC GL+ + SI + +I VESD  E
Subjt:  GWTPPFLNGWKLNIVVAWDPISQFRGVGWVLQDHLGRVCLAGLNSF----NSKVIEAMTICEGLKNICSISVRHIGVESDLFE

TrEMBL top hitse value%identityAlignment
A0A6J1CQG0 uncharacterized protein LOC1110132162.2e-0435.63Show/hide
Query:  LVNAGWTPPFLNGWKLNIVVAWDPISQFRGVGWVLQDHLGRVCLAGLNSFNSK----VIEAMTICEGLKNICSISVRHIGVESDLFE
        ++   W+ P  N WKLN   +W    +  G+GW+L D  G + LAG      K     +E MTI  GL+ I   S   I +ESD  E
Subjt:  LVNAGWTPPFLNGWKLNIVVAWDPISQFRGVGWVLQDHLGRVCLAGLNSFNSK----VIEAMTICEGLKNICSISVRHIGVESDLFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATAATTTGTATTCATTTATGCTTGTCAATGCTGGTTGGACTCCTCCCTTTTTAAATGGATGGAAACTGAATATCGTTGTCGCTTGGGACCCCATTAGTCAATT
TAGGGGTGTAGGTTGGGTACTTCAGGATCATCTAGGCCGTGTTTGTTTGGCTGGTCTAAATTCATTTAACTCCAAGGTTATTGAGGCTATGACGATTTGTGAGGGACTGA
AAAACATTTGCTCTATTAGTGTGCGTCATATCGGGGTAGAGTCTGATTTGTTTGAAAATGGTTCACCTTTTCAATGGTGTTTCATTAGATCTCTCGGAAGTTTCTTTATT
TTCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATAATTTGTATTCATTTATGCTTGTCAATGCTGGTTGGACTCCTCCCTTTTTAAATGGATGGAAACTGAATATCGTTGTCGCTTGGGACCCCATTAGTCAATT
TAGGGGTGTAGGTTGGGTACTTCAGGATCATCTAGGCCGTGTTTGTTTGGCTGGTCTAAATTCATTTAACTCCAAGGTTATTGAGGCTATGACGATTTGTGAGGGACTGA
AAAACATTTGCTCTATTAGTGTGCGTCATATCGGGGTAGAGTCTGATTTGTTTGAAAATGGTTCACCTTTTCAATGGTGTTTCATTAGATCTCTCGGAAGTTTCTTTATT
TTCAATTGA
Protein sequenceShow/hide protein sequence
MENNLYSFMLVNAGWTPPFLNGWKLNIVVAWDPISQFRGVGWVLQDHLGRVCLAGLNSFNSKVIEAMTICEGLKNICSISVRHIGVESDLFENGSPFQWCFIRSLGSFFI
FN