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HG10008460 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008460
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionATP-dependent helicase/nuclease subunit A isoform 1
Genome locationChr10:23341506..23341855
RNA-Seq ExpressionHG10008460
SyntenyHG10008460
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058058.1 ATP-dependent helicase/nuclease subunit A isoform 1 [Cucumis melo var. makuwa]4.0e-2192.06Show/hide
Query:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
        MV  SRKWAY RIIAGTIVGGVLGFYVMHRVE+GYKEKMKERLKQYENELKKKE+MKELEDSL
Subjt:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
KGN63809.2 hypothetical protein Csa_013239 [Cucumis sativus]3.0e-2190.48Show/hide
Query:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
        MV  SRKWAY+RII GT+VGGVLGFYVMHRVE+GYKEKMKERLKQYENELKKKEQMKELEDSL
Subjt:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
XP_004138234.1 uncharacterized protein LOC101217575 [Cucumis sativus]3.0e-2190.48Show/hide
Query:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
        MV  SRKWAY+RII GT+VGGVLGFYVMHRVE+GYKEKMKERLKQYENELKKKEQMKELEDSL
Subjt:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
XP_008453375.1 PREDICTED: uncharacterized protein LOC103494113 [Cucumis melo]4.0e-2192.06Show/hide
Query:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
        MV  SRKWAY RIIAGTIVGGVLGFYVMHRVE+GYKEKMKERLKQYENELKKKE+MKELEDSL
Subjt:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
XP_038882309.1 uncharacterized protein LOC120073547 [Benincasa hispida]1.6e-2295.24Show/hide
Query:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
        M+  SRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
Subjt:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
TrEMBL top hitse value%identityAlignment
A0A1S3BW37 uncharacterized protein LOC1034941131.9e-2192.06Show/hide
Query:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
        MV  SRKWAY RIIAGTIVGGVLGFYVMHRVE+GYKEKMKERLKQYENELKKKE+MKELEDSL
Subjt:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
A0A5A7USD3 ATP-dependent helicase/nuclease subunit A isoform 11.9e-2192.06Show/hide
Query:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
        MV  SRKWAY RIIAGTIVGGVLGFYVMHRVE+GYKEKMKERLKQYENELKKKE+MKELEDSL
Subjt:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
A0A6J1BYI4 uncharacterized protein LOC1110068981.8e-1985.71Show/hide
Query:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
        MV   RKWAY+RII GTIVGGVLGFYVMHRVE+GYKEK+KERL+QYE ELKKKEQMKELEDSL
Subjt:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL
A0A6J1E2A1 uncharacterized protein LOC1114301288.1e-2088.71Show/hide
Query:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDS
        M+  SR WAYMRIIAGTIVGGVLGFYVMHRVE+GYKEKMKERL+QYE ELKKKEQMKELEDS
Subjt:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDS
A0A6J1JJ44 uncharacterized protein LOC1114849051.1e-1988.71Show/hide
Query:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDS
        M+  SR WAYMRIIAGTIVGGVLGFYVMHRVE+GYKEKMKERL+QYE ELKKKEQMKELEDS
Subjt:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G18510.1 unknown protein1.0e-1152.54Show/hide
Query:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKEL
        M   S  W Y RIIAGT++GG LGFYVMHR+E+ YK +M+E L QYE +++K+++ + L
Subjt:  MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKEL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAGCGGTTCTCGTAAATGGGCTTATATGCGGATCATCGCCGGCACCATCGTGGGCGGCGTTCTTGGCTTCTACGTTATGCACCGCGTTGAACTTGGCTATAAGGA
GAAGATGAAAGAGAGGTTAAAACAATACGAGAACGAACTGAAGAAGAAAGAGCAAATGAAAGAACTTGAGGACTCGCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCAGCGGTTCTCGTAAATGGGCTTATATGCGGATCATCGCCGGCACCATCGTGGGCGGCGTTCTTGGCTTCTACGTTATGCACCGCGTTGAACTTGGCTATAAGGA
GAAGATGAAAGAGAGGTTAAAACAATACGAGAACGAACTGAAGAAGAAAGAGCAAATGAAAGAACTTGAGGACTCGCTATAG
Protein sequenceShow/hide protein sequence
MVSGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL