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HG10008496 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008496
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncysteine-rich and transmembrane domain-containing protein B-like
Genome locationChr10:23625555..23626038
RNA-Seq ExpressionHG10008496
SyntenyHG10008496
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058026.1 hypothetical protein E6C27_scaffold274G003310 [Cucumis melo var. makuwa]3.1e-1981.36Show/hide
Query:  QQDTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL
        + DTGPGPY V PP CDPMQHGQ+QPYPPIVP QGETKS+TVPPS +TK RGDGFCRGL
Subjt:  QQDTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL

KAE8652444.1 hypothetical protein Csa_013973 [Cucumis sativus]1.6e-2087.72Show/hide
Query:  DTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL
        DTGPGPY VAPPMCDPMQHGQ+QPYPPIVP QGETKS+TVPPS +TK RGDGFCRGL
Subjt:  DTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL

KAG6587617.1 hypothetical protein SDJN03_16182, partial [Cucurbita argyrosperma subsp. sororia]7.6e-1075.56Show/hide
Query:  MCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL
        MCDPMQHGQSQPY  I+P QGETK Q V P  ET S+GDGFCRGL
Subjt:  MCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL

KAG7021578.1 hypothetical protein SDJN02_15304 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-2077.94Show/hide
Query:  MKQNFQNQPQQDTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL
        MKQ+ QNQ  QDTGPGPYPVAPPMCDPMQHGQSQPY  I+P QGETK Q V P  ET S+GDGFCRGL
Subjt:  MKQNFQNQPQQDTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL

XP_022969088.1 cysteine-rich and transmembrane domain-containing protein B-like [Cucurbita maxima]9.6e-2179.41Show/hide
Query:  MKQNFQNQPQQDTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL
        MKQ+ QNQ  QDTGPGPYPVAPPMCDPMQHGQSQPY  I+P QGETKSQ V P  ET S+GDGFCRGL
Subjt:  MKQNFQNQPQQDTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL

TrEMBL top hitse value%identityAlignment
A0A0A0LPD8 Uncharacterized protein7.9e-2187.72Show/hide
Query:  DTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL
        DTGPGPY VAPPMCDPMQHGQ+QPYPPIVP QGETKS+TVPPS +TK RGDGFCRGL
Subjt:  DTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL

A0A5A7UV38 Uncharacterized protein1.5e-1981.36Show/hide
Query:  QQDTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL
        + DTGPGPY V PP CDPMQHGQ+QPYPPIVP QGETKS+TVPPS +TK RGDGFCRGL
Subjt:  QQDTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL

A0A6J1HZZ2 cysteine-rich and transmembrane domain-containing protein B-like4.6e-2179.41Show/hide
Query:  MKQNFQNQPQQDTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL
        MKQ+ QNQ  QDTGPGPYPVAPPMCDPMQHGQSQPY  I+P QGETKSQ V P  ET S+GDGFCRGL
Subjt:  MKQNFQNQPQQDTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAAAATTTTCAGAACCAACCTCAACAAGATACTGGACCAGGTCCTTATCCAGTTGCCCCACCTATGTGTGATCCAATGCAACATGGTCAGTCTCAGCCATACCC
TCCAATTGTACCTTCTCAAGGGGAAACCAAGTCTCAAACTGTACCTCCTTCAAGTGAAACCAAGTCTAGAGGTGATGGGTTTTGCAGAGGATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACAAAATTTTCAGAACCAACCTCAACAAGATACTGGACCAGGTCCTTATCCAGTTGCCCCACCTATGTGTGATCCAATGCAACATGGTCAGTCTCAGCCATACCC
TCCAATTGTACCTTCTCAAGGGGAAACCAAGTCTCAAACTGTACCTCCTTCAAGTGAAACCAAGTCTAGAGGTGATGGGTTTTGCAGAGGATTGTAA
Protein sequenceShow/hide protein sequence
MKQNFQNQPQQDTGPGPYPVAPPMCDPMQHGQSQPYPPIVPSQGETKSQTVPPSSETKSRGDGFCRGL