; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008535 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008535
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionHistone deacetylase
Genome locationChr10:23987144..23990200
RNA-Seq ExpressionHG10008535
SyntenyHG10008535
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0070932 - histone H3 deacetylation (biological process)
GO:0032041 - NAD-dependent histone deacetylase activity (H3-K14 specific) (molecular function)
InterPro domainsIPR037138 - Histone deacetylase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057989.1 histone deacetylase 5 [Cucumis melo var. makuwa]3.3e-15679.14Show/hide
Query:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA
        MNLAQGKIVLALEGGYNLDSIA+SMLACAE LLDG+T+NKSSETYP+ESTW+VIQA                            EV LSSSDSDDEA N 
Subjt:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA

Query:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY
        R+K+LEEVLQGI  SQLEVKEDSQGQAVNVTQPWR ELSKTD+WYAAFGSNLWCPR LCYIRGGQVEGM R C GSMD T PKE +WK+FPHRLFFGREY
Subjt:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY

Query:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN
        ++TWGQGGVAFL+P+SNSEEKSYLCLYRITLEQFNDLLYQEN+ SG LSDNPLLDIANLNKVT +PSNSIEVPTGKGWYHNL+YLGKE +IPILTMTCS+
Subjt:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN

Query:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL
         D+EGFKSGKIPIC+PAKEYV+TLV+GLAEGPLSKEEA  YIQ ASTKPL
Subjt:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL

XP_004138195.1 histone deacetylase 5 [Cucumis sativus]8.8e-15779.14Show/hide
Query:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA
        MNLAQGKIVLALEGGYNLDSIASSMLACAE LLDG+T+NK  ETYP+ESTW+VIQA                            EV LSSSDSDDEASN 
Subjt:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA

Query:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY
        R+KSLEEVLQGI  SQLEVKEDSQGQAVNVTQPWR ELSKTD+WYAAFGSNLWCPR LCYIRGGQVEGM R C GSMD T PKE MWK+FPHRLFFG E+
Subjt:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY

Query:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN
        T+TWGQGGVAFL+P+SNSEEKSYLCLYRITLEQFNDLLYQEN+ S  LSDNPLLDIANLNKVT +PSNS+EVPTGKGWYHNLVYLGKERDIPILTMTCS+
Subjt:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN

Query:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL
         D+E FK GKIPIC+PAKEYV+TLV GLA GPLSKEEAL YI+NASTKPL
Subjt:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL

XP_008453265.1 PREDICTED: histone deacetylase 5 [Cucumis melo]3.3e-15679.14Show/hide
Query:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA
        MNLAQGKIVLALEGGYNLDSIA+SMLACAE LLDG+T+NKSSETYP+ESTW+VIQA                            EV LSSSDSDDEA N 
Subjt:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA

Query:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY
        R+K+LEEVLQGI  SQLEVKEDSQGQAVNVTQPWR ELSKTD+WYAAFGSNLWCPR LCYIRGGQVEGM R C GSMD T PKE +WK+FPHRLFFGREY
Subjt:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY

Query:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN
        ++TWGQGGVAFL+P+SNSEEKSYLCLYRITLEQFNDLLYQEN+ SG LSDNPLLDIANLNKVT +PSNSIEVPTGKGWYHNL+YLGKE +IPILTMTCS+
Subjt:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN

Query:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL
         D+EGFKSGKIPIC+PAKEYV+TLV+GLAEGPLSKEEA  YIQ ASTKPL
Subjt:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL

XP_022921667.1 histone deacetylase 5 [Cucurbita moschata]9.1e-15476.29Show/hide
Query:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA
        MNL QGKIVLALEGGYNLDSIA+SMLACAE L+DG+TMN SSET P+ESTWRVIQA                            EV LSSSDS+DEAS++
Subjt:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA

Query:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY
        R+KSLEE+LQGI LSQ+EVKEDSQGQAVNVT PWRLELSKTD+WYA+FGSN+W PRFLCYI+GGQVEGM +PC GSMDKT PK  +WKTFP RLFFG EY
Subjt:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY

Query:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN
        TNTWGQGG AFLHP+SNS+EKS+LCLYRITLEQFND+LYQENSGSGFLSDNPLLDIANLNK+T N S SIE+ TG+GWYHNLVYLGKE+++PI+TMTCS+
Subjt:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN

Query:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL
        LD+E FKSGK+P+CAPAK YVDTLVKGLAEGPLSKEEALVYIQ A TKPL
Subjt:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL

XP_038878340.1 histone deacetylase 5 [Benincasa hispida]3.1e-17085.75Show/hide
Query:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEA-SN
        MNLAQGKIVLALEGGYNLDSIASSMLACAE LLDG+TM KSSETYP+ESTWRVIQA                            EV LSSSDSDDEA SN
Subjt:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEA-SN

Query:  ARIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGRE
         R+KSLEEVLQGI LSQLEVKED QGQAVNVT PWR+ELSKTD+WYAAFGSNLWCPRFLCY+ GGQVEGMNRPC GSMDKTAPKE MWKTFPHRLFFGRE
Subjt:  ARIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGRE

Query:  YTNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCS
        YTNTWGQGGVAFLHP+SNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTG+GWYHNLVYLGKE DIPILTMTCS
Subjt:  YTNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCS

Query:  NLDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL
         LD+EGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL
Subjt:  NLDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL

TrEMBL top hitse value%identityAlignment
A0A0A0LPI7 Histone deacetylase4.2e-15779.14Show/hide
Query:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA
        MNLAQGKIVLALEGGYNLDSIASSMLACAE LLDG+T+NK  ETYP+ESTW+VIQA                            EV LSSSDSDDEASN 
Subjt:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA

Query:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY
        R+KSLEEVLQGI  SQLEVKEDSQGQAVNVTQPWR ELSKTD+WYAAFGSNLWCPR LCYIRGGQVEGM R C GSMD T PKE MWK+FPHRLFFG E+
Subjt:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY

Query:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN
        T+TWGQGGVAFL+P+SNSEEKSYLCLYRITLEQFNDLLYQEN+ S  LSDNPLLDIANLNKVT +PSNS+EVPTGKGWYHNLVYLGKERDIPILTMTCS+
Subjt:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN

Query:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL
         D+E FK GKIPIC+PAKEYV+TLV GLA GPLSKEEAL YI+NASTKPL
Subjt:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL

A0A1S3BWL5 Histone deacetylase1.6e-15679.14Show/hide
Query:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA
        MNLAQGKIVLALEGGYNLDSIA+SMLACAE LLDG+T+NKSSETYP+ESTW+VIQA                            EV LSSSDSDDEA N 
Subjt:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA

Query:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY
        R+K+LEEVLQGI  SQLEVKEDSQGQAVNVTQPWR ELSKTD+WYAAFGSNLWCPR LCYIRGGQVEGM R C GSMD T PKE +WK+FPHRLFFGREY
Subjt:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY

Query:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN
        ++TWGQGGVAFL+P+SNSEEKSYLCLYRITLEQFNDLLYQEN+ SG LSDNPLLDIANLNKVT +PSNSIEVPTGKGWYHNL+YLGKE +IPILTMTCS+
Subjt:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN

Query:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL
         D+EGFKSGKIPIC+PAKEYV+TLV+GLAEGPLSKEEA  YIQ ASTKPL
Subjt:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL

A0A5A7UWV4 Histone deacetylase1.6e-15679.14Show/hide
Query:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA
        MNLAQGKIVLALEGGYNLDSIA+SMLACAE LLDG+T+NKSSETYP+ESTW+VIQA                            EV LSSSDSDDEA N 
Subjt:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA

Query:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY
        R+K+LEEVLQGI  SQLEVKEDSQGQAVNVTQPWR ELSKTD+WYAAFGSNLWCPR LCYIRGGQVEGM R C GSMD T PKE +WK+FPHRLFFGREY
Subjt:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY

Query:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN
        ++TWGQGGVAFL+P+SNSEEKSYLCLYRITLEQFNDLLYQEN+ SG LSDNPLLDIANLNKVT +PSNSIEVPTGKGWYHNL+YLGKE +IPILTMTCS+
Subjt:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN

Query:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL
         D+EGFKSGKIPIC+PAKEYV+TLV+GLAEGPLSKEEA  YIQ ASTKPL
Subjt:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL

A0A6J1E149 Histone deacetylase4.4e-15476.29Show/hide
Query:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA
        MNL QGKIVLALEGGYNLDSIA+SMLACAE L+DG+TMN SSET P+ESTWRVIQA                            EV LSSSDS+DEAS++
Subjt:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA

Query:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY
        R+KSLEE+LQGI LSQ+EVKEDSQGQAVNVT PWRLELSKTD+WYA+FGSN+W PRFLCYI+GGQVEGM +PC GSMDKT PK  +WKTFP RLFFG EY
Subjt:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY

Query:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN
        TNTWGQGG AFLHP+SNS+EKS+LCLYRITLEQFND+LYQENSGSGFLSDNPLLDIANLNK+T N S SIE+ TG+GWYHNLVYLGKE+++PI+TMTCS+
Subjt:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN

Query:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL
        LD+E FKSGK+P+CAPAK YVDTLVKGLAEGPLSKEEALVYIQ A TKPL
Subjt:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL

A0A6J1JKV3 Histone deacetylase3.7e-15375.71Show/hide
Query:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA
        MNL QGKIVLALEGGYNLDSIA+SMLACAE L+DG TMN SSET P+ESTWRVIQA                            EV LSSSDS+DEAS++
Subjt:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA----------------------------EVFLSSSDSDDEASNA

Query:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY
        R+KSLEE+LQGI LSQ+EVKED+QGQAVNVT PWRLELSKTD+WYA++GSN+W PRFLCYI GGQVEGM +PC GSMDKT PKE +WKTFPHRLFFG EY
Subjt:  RIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREY

Query:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN
        TNTWGQGG AFLHP SNS+EKS+LCLYRITLEQFND+LYQENSGSGFLSDNPLLDIANLNK+T N S SIE+ TG+GWYHNLVYLG+E ++PI+TMTCS+
Subjt:  TNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSN

Query:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL
        LD+E FKSGK+P+CAPAK YVDTLVKGLA GPLSKEEALVYIQ A TKPL
Subjt:  LDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL

SwissProt top hitse value%identityAlignment
Q8LRK8 Histone deacetylase 183.6e-1266.07Show/hide
Query:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA
        M  A GKIVLALEGGYNL+S+  S LAC + LL+ K ++ SSETYP EST RVIQA
Subjt:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA

Q8RX28 Histone deacetylase 59.3e-9352.09Show/hide
Query:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQAE----------------------------VFLSSSDSDDEASNA
        M  AQGKIVLALEGGYNLDSIA S LAC + LL+ K +    E YP+ESTWRVIQA                             + +SSSDS+ E  NA
Subjt:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQAE----------------------------VFLSSSDSDDEASNA

Query:  RIKSLEEVLQGI--RLSQLEVKEDSQG------QAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPH
                 QG+  ++S+L + E+ QG      Q    +  WR +L+K DVWYA+FGSN+W PRFLCYI+GGQV+G+ + C+GSMDK+ PKET+W+TFPH
Subjt:  RIKSLEEVLQGI--RLSQLEVKEDSQG------QAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPH

Query:  RLFFGREYTNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIP
        RLFFGRE +  WG GGVAF +P +N  +++++CLYRITLEQFND+L QEN G    SD+P+ D+A L ++ DN  + +E P    WY N+V LGKERDIP
Subjt:  RLFFGREYTNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIP

Query:  ILTMTCSNLDIEGFKSGKIPICAPAKEYVDTLVKGLAE-GPLSKEEALVYIQNASTKPL
        ILTMTC+   +E FKSG+IPI  PAK Y +TL++GL E G LSKEEA  YI  A +KPL
Subjt:  ILTMTCSNLDIEGFKSGKIPICAPAKEYVDTLVKGLAE-GPLSKEEALVYIQNASTKPL

Arabidopsis top hitse value%identityAlignment
AT5G61050.1 histone deacetylase-related / HD-related6.2e-6854.42Show/hide
Query:  QAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREYTNTWGQGGVAFLHPKSNSEEKSYLC
        Q    +  WR++L+K DVWYA++GSN+W PRF+CYI+GGQ EGM + C+GSMDK+ PKE MWKTFPHRL FGRE +  WG GGVA+ +P +N  +++++C
Subjt:  QAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREYTNTWGQGGVAFLHPKSNSEEKSYLC

Query:  LYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSNLDIEGFKSGKIPICAPAKEYVDTLV
        LYRITLEQFNDLL+QEN      SD P  D+A L       S S++       Y N+V LGKE  IPILT+TC+   +E FKSG+IPI  PAK Y +TL+
Subjt:  LYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSNLDIEGFKSGKIPICAPAKEYVDTLV

Query:  KGLAE-GPLSKEEALVYIQNASTKPL
        +GL + G  S EEA  YI NA++KPL
Subjt:  KGLAE-GPLSKEEALVYIQNASTKPL

AT5G61060.1 histone deacetylase 56.6e-9452.09Show/hide
Query:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQAE----------------------------VFLSSSDSDDEASNA
        M  AQGKIVLALEGGYNLDSIA S LAC + LL+ K +    E YP+ESTWRVIQA                             + +SSSDS+ E  NA
Subjt:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQAE----------------------------VFLSSSDSDDEASNA

Query:  RIKSLEEVLQGI--RLSQLEVKEDSQG------QAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPH
                 QG+  ++S+L + E+ QG      Q    +  WR +L+K DVWYA+FGSN+W PRFLCYI+GGQV+G+ + C+GSMDK+ PKET+W+TFPH
Subjt:  RIKSLEEVLQGI--RLSQLEVKEDSQG------QAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPH

Query:  RLFFGREYTNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIP
        RLFFGRE +  WG GGVAF +P +N  +++++CLYRITLEQFND+L QEN G    SD+P+ D+A L ++ DN  + +E P    WY N+V LGKERDIP
Subjt:  RLFFGREYTNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIP

Query:  ILTMTCSNLDIEGFKSGKIPICAPAKEYVDTLVKGLAE-GPLSKEEALVYIQNASTKPL
        ILTMTC+   +E FKSG+IPI  PAK Y +TL++GL E G LSKEEA  YI  A +KPL
Subjt:  ILTMTCSNLDIEGFKSGKIPICAPAKEYVDTLVKGLAE-GPLSKEEALVYIQNASTKPL

AT5G61060.2 histone deacetylase 56.6e-9452.09Show/hide
Query:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQAE----------------------------VFLSSSDSDDEASNA
        M  AQGKIVLALEGGYNLDSIA S LAC + LL+ K +    E YP+ESTWRVIQA                             + +SSSDS+ E  NA
Subjt:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQAE----------------------------VFLSSSDSDDEASNA

Query:  RIKSLEEVLQGI--RLSQLEVKEDSQG------QAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPH
                 QG+  ++S+L + E+ QG      Q    +  WR +L+K DVWYA+FGSN+W PRFLCYI+GGQV+G+ + C+GSMDK+ PKET+W+TFPH
Subjt:  RIKSLEEVLQGI--RLSQLEVKEDSQG------QAVNVTQPWRLELSKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPH

Query:  RLFFGREYTNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIP
        RLFFGRE +  WG GGVAF +P +N  +++++CLYRITLEQFND+L QEN G    SD+P+ D+A L ++ DN  + +E P    WY N+V LGKERDIP
Subjt:  RLFFGREYTNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFLSDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIP

Query:  ILTMTCSNLDIEGFKSGKIPICAPAKEYVDTLVKGLAE-GPLSKEEALVYIQNASTKPL
        ILTMTC+   +E FKSG+IPI  PAK Y +TL++GL E G LSKEEA  YI  A +KPL
Subjt:  ILTMTCSNLDIEGFKSGKIPICAPAKEYVDTLVKGLAE-GPLSKEEALVYIQNASTKPL

AT5G61070.1 histone deacetylase of the RPD3/HDA1 superfamily 182.6e-1366.07Show/hide
Query:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA
        M  A GKIVLALEGGYNL+S+  S LAC + LL+ K ++ SSETYP EST RVIQA
Subjt:  MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCTTGCACAAGGAAAGATTGTATTGGCCCTGGAAGGAGGATATAATCTTGACTCTATAGCAAGTTCAATGCTTGCCTGTGCGGAATTTCTGCTTGATGGAAAAAC
TATGAATAAATCTTCAGAGACCTATCCATATGAGTCAACATGGCGAGTGATCCAAGCAGAGGTATTCCTTTCAAGCTCTGATTCGGATGATGAAGCTTCCAATGCTAGAA
TAAAGAGCCTCGAGGAAGTTCTTCAGGGTATCAGACTTTCACAATTAGAAGTTAAGGAAGACAGTCAGGGTCAAGCGGTTAATGTTACTCAGCCTTGGAGATTGGAGCTA
TCAAAAACCGATGTCTGGTATGCTGCCTTTGGATCAAATTTGTGGTGCCCAAGATTCCTTTGTTATATCAGAGGAGGACAGGTTGAGGGTATGAACAGACCATGTATAGG
TTCAATGGACAAGACTGCCCCAAAGGAGACTATGTGGAAAACTTTTCCTCATCGTCTATTCTTCGGTCGTGAGTATACCAATACATGGGGCCAAGGAGGAGTTGCTTTTC
TTCATCCTAAAAGCAACAGCGAGGAGAAATCTTACTTGTGCTTGTATAGAATTACGCTAGAGCAATTTAACGATCTTTTGTATCAAGAAAATAGTGGTAGTGGTTTCCTT
TCTGATAACCCTTTGTTGGATATAGCTAATCTGAACAAAGTCACAGACAACCCTTCCAACTCTATTGAGGTTCCAACTGGGAAAGGCTGGTACCACAACCTTGTATATTT
GGGGAAAGAACGCGATATTCCGATACTAACTATGACATGTTCAAATTTGGATATAGAAGGCTTCAAATCTGGAAAAATTCCCATCTGTGCACCAGCTAAAGAGTACGTTG
ATACCCTTGTTAAAGGCCTTGCAGAAGGGCCACTTTCTAAGGAGGAAGCTTTGGTTTATATTCAGAATGCTTCAACTAAGCCACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCTTGCACAAGGAAAGATTGTATTGGCCCTGGAAGGAGGATATAATCTTGACTCTATAGCAAGTTCAATGCTTGCCTGTGCGGAATTTCTGCTTGATGGAAAAAC
TATGAATAAATCTTCAGAGACCTATCCATATGAGTCAACATGGCGAGTGATCCAAGCAGAGGTATTCCTTTCAAGCTCTGATTCGGATGATGAAGCTTCCAATGCTAGAA
TAAAGAGCCTCGAGGAAGTTCTTCAGGGTATCAGACTTTCACAATTAGAAGTTAAGGAAGACAGTCAGGGTCAAGCGGTTAATGTTACTCAGCCTTGGAGATTGGAGCTA
TCAAAAACCGATGTCTGGTATGCTGCCTTTGGATCAAATTTGTGGTGCCCAAGATTCCTTTGTTATATCAGAGGAGGACAGGTTGAGGGTATGAACAGACCATGTATAGG
TTCAATGGACAAGACTGCCCCAAAGGAGACTATGTGGAAAACTTTTCCTCATCGTCTATTCTTCGGTCGTGAGTATACCAATACATGGGGCCAAGGAGGAGTTGCTTTTC
TTCATCCTAAAAGCAACAGCGAGGAGAAATCTTACTTGTGCTTGTATAGAATTACGCTAGAGCAATTTAACGATCTTTTGTATCAAGAAAATAGTGGTAGTGGTTTCCTT
TCTGATAACCCTTTGTTGGATATAGCTAATCTGAACAAAGTCACAGACAACCCTTCCAACTCTATTGAGGTTCCAACTGGGAAAGGCTGGTACCACAACCTTGTATATTT
GGGGAAAGAACGCGATATTCCGATACTAACTATGACATGTTCAAATTTGGATATAGAAGGCTTCAAATCTGGAAAAATTCCCATCTGTGCACCAGCTAAAGAGTACGTTG
ATACCCTTGTTAAAGGCCTTGCAGAAGGGCCACTTTCTAAGGAGGAAGCTTTGGTTTATATTCAGAATGCTTCAACTAAGCCACTGTAA
Protein sequenceShow/hide protein sequence
MNLAQGKIVLALEGGYNLDSIASSMLACAEFLLDGKTMNKSSETYPYESTWRVIQAEVFLSSSDSDDEASNARIKSLEEVLQGIRLSQLEVKEDSQGQAVNVTQPWRLEL
SKTDVWYAAFGSNLWCPRFLCYIRGGQVEGMNRPCIGSMDKTAPKETMWKTFPHRLFFGREYTNTWGQGGVAFLHPKSNSEEKSYLCLYRITLEQFNDLLYQENSGSGFL
SDNPLLDIANLNKVTDNPSNSIEVPTGKGWYHNLVYLGKERDIPILTMTCSNLDIEGFKSGKIPICAPAKEYVDTLVKGLAEGPLSKEEALVYIQNASTKPL