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HG10008540 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008540
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein Asterix-like
Genome locationChr10:24023534..24025917
RNA-Seq ExpressionHG10008540
SyntenyHG10008540
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0045048 - protein insertion into ER membrane (biological process)
GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component)
GO:0044183 - protein folding chaperone (molecular function)
InterPro domainsIPR005351 - PAT complex subunit Asterix


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587575.1 Protein Asterix, partial [Cucurbita argyrosperma subsp. sororia]7.5e-4697.03Show/hide
Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFV+PAVNPQDL VDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFA MGLVTNYLGPARPGTK
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

XP_004138191.1 protein Asterix [Cucumis sativus]5.4e-4494.06Show/hide
Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK
        MSTQANDPRQPSA KPFVAPAVNPQDL VDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFA MGLVTNYL PARPG K
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

XP_008453260.1 PREDICTED: protein Asterix [Cucumis melo]1.4e-4495.05Show/hide
Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK
        MSTQANDPRQPSA KPFVAPAVNPQDL VDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFA MGLVTNYL PARPGTK
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

XP_022933634.1 protein Asterix-like [Cucurbita moschata]7.5e-4697.03Show/hide
Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFV+PAVNPQDL VDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFA MGLVTNYLGPARPGTK
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

XP_038880376.1 protein Asterix [Benincasa hispida]9.8e-4697.03Show/hide
Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFVAPAVNPQDL VDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFA MGLVTNYLGPARPGTK
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A0A0LSF0 Uncharacterized protein2.6e-4494.06Show/hide
Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK
        MSTQANDPRQPSA KPFVAPAVNPQDL VDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFA MGLVTNYL PARPG K
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

A0A1S3BWL0 protein Asterix6.8e-4595.05Show/hide
Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK
        MSTQANDPRQPSA KPFVAPAVNPQDL VDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFA MGLVTNYL PARPGTK
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

A0A6J1E5Z1 protein Asterix-like5.8e-4493.07Show/hide
Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFV+P VNPQDL VDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRN+ENDLKQISMAMMFA MGLVTNYL P RPGTK
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

A0A6J1F0A5 protein Asterix-like3.6e-4697.03Show/hide
Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFV+PAVNPQDL VDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFA MGLVTNYLGPARPGTK
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

A0A6J1KYK4 protein Asterix-like3.6e-4697.03Show/hide
Query:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK
        MSTQANDPRQPSAAKPFV+PAVNPQDL VDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFA MGLVTNYLGPARPGTK
Subjt:  MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
F8RT80 PAT complex subunit Asterix3.0e-0532.63Show/hide
Query:  DPRQPSAAKPFVAPAV--NP--QDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARP
        DPR+P+    +  P    NP  +D T DY   + +VF + G+M + K  +W+A+     S AN R+ E D KQ+  + M +   +V +YL   +P
Subjt:  DPRQPSAAKPFVAPAV--NP--QDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARP

Q6ZWX0 PAT complex subunit Asterix6.7e-0532.69Show/hide
Query:  MST-QANDPRQPSAAKPFVAP--AVNP--QDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPA
        MST   +DPR+P+    +  P    NP   D T DY   + ++F + G+M + K  +W+A+     S AN R+ E D KQ+  + M +   +V +YL   
Subjt:  MST-QANDPRQPSAAKPFVAP--AVNP--QDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPA

Query:  RPGT
        +P T
Subjt:  RPGT

Q9SD88 Protein Asterix2.1e-3877.78Show/hide
Query:  STQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK
        ++  NDPRQPSAAKP++   V P+DL VDYSGFIAV+ G++GVMFRYK+ SWLAIIFCAQSLANMRN+ENDLKQISMAMMFA MGLVTNYLGP RP TK
Subjt:  STQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK

Q9U516 Protein Asterix3.0e-0531.58Show/hide
Query:  NDPRQPSAAKPFVAP---AVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARP
        +DPR+    + +  P       +DLT DY   + +VF + G+M R K  +W A+   + S AN R + +D KQI  + M +   +V +YL    P
Subjt:  NDPRQPSAAKPFVAP---AVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARP

Q9Y284 PAT complex subunit Asterix6.7e-0532.69Show/hide
Query:  MST-QANDPRQPSAAKPFVAP--AVNP--QDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPA
        MST   +DPR+P+    +  P    NP   D T DY   + ++F + G+M + K  +W+A+     S AN R+ E D KQ+  + M +   +V +YL   
Subjt:  MST-QANDPRQPSAAKPFVAP--AVNP--QDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPA

Query:  RPGT
        +P T
Subjt:  RPGT

Arabidopsis top hitse value%identityAlignment
AT5G07960.1 unknown protein1.5e-3977.78Show/hide
Query:  STQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK
        ++  NDPRQPSAAKP++   V P+DL VDYSGFIAV+ G++GVMFRYK+ SWLAIIFCAQSLANMRN+ENDLKQISMAMMFA MGLVTNYLGP RP TK
Subjt:  STQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACACAAGCGAATGATCCACGGCAGCCGTCGGCCGCGAAGCCTTTTGTTGCTCCGGCAGTGAATCCGCAAGATCTCACCGTCGATTATTCCGGCTTCATCGCCGT
AGTTTTCGGGATCGCCGGTGTCATGTTCAGGTACAAGCTTAGTTCGTGGCTAGCCATCATATTTTGCGCCCAATCGCTTGCGAATATGAGGAATATGGAGAACGATCTCA
AGCAGATTTCCATGGCCATGATGTTTGCTAGTATGGGATTAGTGACAAATTACTTGGGACCTGCACGACCAGGAACAAAAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACACAAGCGAATGATCCACGGCAGCCGTCGGCCGCGAAGCCTTTTGTTGCTCCGGCAGTGAATCCGCAAGATCTCACCGTCGATTATTCCGGCTTCATCGCCGT
AGTTTTCGGGATCGCCGGTGTCATGTTCAGGTACAAGCTTAGTTCGTGGCTAGCCATCATATTTTGCGCCCAATCGCTTGCGAATATGAGGAATATGGAGAACGATCTCA
AGCAGATTTCCATGGCCATGATGTTTGCTAGTATGGGATTAGTGACAAATTACTTGGGACCTGCACGACCAGGAACAAAAAGTTAA
Protein sequenceShow/hide protein sequence
MSTQANDPRQPSAAKPFVAPAVNPQDLTVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNMENDLKQISMAMMFASMGLVTNYLGPARPGTKS