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HG10008541 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008541
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr10:24027600..24028050
RNA-Seq ExpressionHG10008541
SyntenyHG10008541
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF47791.1 conserved hypothetical protein [Ricinus communis]3.8e-0436.89Show/hide
Query:  SNLYDYQEFKAMIGHLNKA----THFSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKL
        S LYD  EF+A+   LNKA       SP  +S   + SPFY  RL+ IYK+++ + KRIM  +   +   K  + K +    G       A +LWK+IK 
Subjt:  SNLYDYQEFKAMIGHLNKA----THFSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKL

Query:  GLM
        GL+
Subjt:  GLM

KAF4392625.1 hypothetical protein F8388_003045 [Cannabis sativa]2.2e-0433.98Show/hide
Query:  SNLYDYQEFKAMIGHLNKATH----FSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKL
        S LYD  E  A++  LNKA      FSP  + N   NSPFYR+R N+IYK++  S+K++    +       +D +K    +   +    +  +LWK++K 
Subjt:  SNLYDYQEFKAMIGHLNKATH----FSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKL

Query:  GLM
        GL+
Subjt:  GLM

KAF4403081.1 hypothetical protein G4B88_027852 [Cannabis sativa]3.8e-0433.98Show/hide
Query:  SNLYDYQEFKAMIGHLNKATH----FSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKL
        S LYD  E  A++  LNKA      FSP  + N   NSPFYR+R N+IYK++  S+K++    +       +D +K    +   +    +  +LWK++K 
Subjt:  SNLYDYQEFKAMIGHLNKATH----FSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKL

Query:  GLM
        GL+
Subjt:  GLM

KDP31321.1 hypothetical protein JCGZ_11697 [Jatropha curcas]7.7e-0535.45Show/hide
Query:  SNLYDYQEFKAMIGHLNKATH----FSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKL
        S LYD  E +A+   LNKA       SP ++S   + SPFY QRL+ IYK++ ++ K+IM  Q     +  ID     T   G++S      +LWK++K 
Subjt:  SNLYDYQEFKAMIGHLNKATH----FSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKL

Query:  GLMGTFPKKD
        GL+ +  + D
Subjt:  GLMGTFPKKD

KGN53885.1 hypothetical protein Csa_011823 [Cucumis sativus]1.1e-4680.17Show/hide
Query:  MEEEQSRASKEGHSNLYDYQEFKAMIGHLNKATHFSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLA
        MEE+QS A K+ HSNLYDYQEFKAMIGHLNKATHFSP+VLSNHLINSPFYRQRLNEIYK+S  STK+IMWY+TG +QKG I+T+K  TKQRGMISN SLA
Subjt:  MEEEQSRASKEGHSNLYDYQEFKAMIGHLNKATHFSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLA

Query:  GKLWKQIKLGLMGTFPKKDVK
        G+LWKQIK+GLMG  PKKD+K
Subjt:  GKLWKQIKLGLMGTFPKKDVK

TrEMBL top hitse value%identityAlignment
A0A067K525 Uncharacterized protein3.7e-0535.45Show/hide
Query:  SNLYDYQEFKAMIGHLNKATH----FSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKL
        S LYD  E +A+   LNKA       SP ++S   + SPFY QRL+ IYK++ ++ K+IM  Q     +  ID     T   G++S      +LWK++K 
Subjt:  SNLYDYQEFKAMIGHLNKATH----FSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKL

Query:  GLMGTFPKKD
        GL+ +  + D
Subjt:  GLMGTFPKKD

A0A0A0KW83 Uncharacterized protein5.1e-4780.17Show/hide
Query:  MEEEQSRASKEGHSNLYDYQEFKAMIGHLNKATHFSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLA
        MEE+QS A K+ HSNLYDYQEFKAMIGHLNKATHFSP+VLSNHLINSPFYRQRLNEIYK+S  STK+IMWY+TG +QKG I+T+K  TKQRGMISN SLA
Subjt:  MEEEQSRASKEGHSNLYDYQEFKAMIGHLNKATHFSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLA

Query:  GKLWKQIKLGLMGTFPKKDVK
        G+LWKQIK+GLMG  PKKD+K
Subjt:  GKLWKQIKLGLMGTFPKKDVK

A0A7J6HC11 Uncharacterized protein1.1e-0433.98Show/hide
Query:  SNLYDYQEFKAMIGHLNKATH----FSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKL
        S LYD  E  A++  LNKA      FSP  + N   NSPFYR+R N+IYK++  S+K++    +       +D +K    +   +    +  +LWK++K 
Subjt:  SNLYDYQEFKAMIGHLNKATH----FSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKL

Query:  GLM
        GL+
Subjt:  GLM

A0A803P9L1 Uncharacterized protein1.1e-0433.98Show/hide
Query:  SNLYDYQEFKAMIGHLNKATH----FSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKL
        S LYD  E  A++  LNKA      FSP  + N   NSPFYR+R N+IYK++  S+K++    +       +D +K    +   +    +  +LWK++K 
Subjt:  SNLYDYQEFKAMIGHLNKATH----FSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKL

Query:  GLM
        GL+
Subjt:  GLM

B9RLR6 Uncharacterized protein1.8e-0436.89Show/hide
Query:  SNLYDYQEFKAMIGHLNKA----THFSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKL
        S LYD  EF+A+   LNKA       SP  +S   + SPFY  RL+ IYK+++ + KRIM  +   +   K  + K +    G       A +LWK+IK 
Subjt:  SNLYDYQEFKAMIGHLNKA----THFSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKL

Query:  GLM
        GL+
Subjt:  GLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAACAATCAAGAGCTTCAAAAGAGGGTCATAGCAATCTATATGACTATCAAGAGTTTAAAGCTATGATCGGTCACCTCAACAAAGCCACTCATTTCAGTCC
CAACGTATTATCCAACCATTTGATCAATTCACCGTTTTATCGTCAACGTTTGAATGAAATTTATAAAGATAGTACTCGCTCAACTAAGAGGATCATGTGGTATCAAACAG
GCTGGCAACAAAAAGGAAAAATTGACACTGCCAAAGAAAACACAAAGCAAAGGGGGATGATATCAAATGTATCACTTGCTGGTAAGCTATGGAAGCAAATTAAGCTAGGT
CTAATGGGTACTTTTCCAAAGAAAGATGTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGAACAATCAAGAGCTTCAAAAGAGGGTCATAGCAATCTATATGACTATCAAGAGTTTAAAGCTATGATCGGTCACCTCAACAAAGCCACTCATTTCAGTCC
CAACGTATTATCCAACCATTTGATCAATTCACCGTTTTATCGTCAACGTTTGAATGAAATTTATAAAGATAGTACTCGCTCAACTAAGAGGATCATGTGGTATCAAACAG
GCTGGCAACAAAAAGGAAAAATTGACACTGCCAAAGAAAACACAAAGCAAAGGGGGATGATATCAAATGTATCACTTGCTGGTAAGCTATGGAAGCAAATTAAGCTAGGT
CTAATGGGTACTTTTCCAAAGAAAGATGTGAAGTAA
Protein sequenceShow/hide protein sequence
MEEEQSRASKEGHSNLYDYQEFKAMIGHLNKATHFSPNVLSNHLINSPFYRQRLNEIYKDSTRSTKRIMWYQTGWQQKGKIDTAKENTKQRGMISNVSLAGKLWKQIKLG
LMGTFPKKDVK