; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008543 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008543
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTetratricopeptide repeat-like superfamily protein
Genome locationChr10:24036070..24036786
RNA-Seq ExpressionHG10008543
SyntenyHG10008543
Gene Ontology termsGO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044514.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.4e-10685.9Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MPKNDVI WSFMI+RF     +  ALEIFCQMRRAFV PN+F FSSVLQASAAMESLDL KTIHGHAL+ GLSTDVFVSNALMACYAKCGCIEQSMELFE
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
        A SDRNDVSWNTII+SYVQLGDGE+ALSLF  MLRYQVQATEVTYSSILRACAT  ALELGLQ+ CLTAKTIYGQD AVGNALIDMYAK  SIKDA FMF
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
         ML+LRD+VSWNAIICGYSMHGLGVEAIKMF+LM
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

XP_004152153.2 putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial [Cucumis sativus]4.0e-10685.47Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MPKNDVI WSFMI+RF     +  ALEIFCQMRRAFVIPN+F FSSVLQASA +ESLDL KTIHGHAL+ GLSTDVFVSNALMACYAKCGCIEQSMELFE
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
        A SDRNDVSWNTII+SYVQLGDGE+ALSLF  MLRYQVQATEVTYSSILRACAT  ALELGLQ+ CLTAKTIYGQD AVGNALIDMYAK  SIKDA FMF
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
         ML+LRD+VSWNAIICGYSMHGLGVEAIKMF+LM
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

XP_008454122.1 PREDICTED: putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial [Cucumis melo]1.4e-10685.9Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MPKNDVI WSFMI+RF     +  ALEIFCQMRRAFV PN+F FSSVLQASAAMESLDL KTIHGHAL+ GLSTDVFVSNALMACYAKCGCIEQSMELFE
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
        A SDRNDVSWNTII+SYVQLGDGE+ALSLF  MLRYQVQATEVTYSSILRACAT  ALELGLQ+ CLTAKTIYGQD AVGNALIDMYAK  SIKDA FMF
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
         ML+LRD+VSWNAIICGYSMHGLGVEAIKMF+LM
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

XP_022980812.1 putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial [Cucurbita maxima]3.4e-10584.62Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MPK DVI WSFMIARF     +  ALE+FCQMRRAFV+PNEF FSSVLQASAAME+LDLG+TIHGHAL+ G+STDVFVSNALMACYAKCGCIE+SMELFE
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
        A SDRNDVSWNTII+ YVQLGDGEKALSLF  M RY VQ TEVTYSSILRACAT  ALELGLQI CLTAKTIYGQD AVGNALIDMYAK  SIKDA  MF
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
         MLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

XP_038905014.1 putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial [Benincasa hispida]9.8e-10585.04Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MPKNDVI WSFMIARF     +  ALE+FC MRRAFV PNEF FSS LQASAAMESLDLGKTIHG+AL+ GLSTDVFVSNALMACYAKCGCIE+SMELFE
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
          SDRNDVSWNTII+SYVQL DGEKAL LF KMLRYQV+ATEVTYSSILRACAT  ALELGLQI CLTAKTIYGQD +VGNALIDMYAK  SIKDA FMF
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
         MLNLRDRVSWNAIICGYSMHGLGVEAI MFDLM
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

TrEMBL top hitse value%identityAlignment
A0A0A0KX57 DYW_deaminase domain-containing protein1.9e-10685.47Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MPKNDVI WSFMI+RF     +  ALEIFCQMRRAFVIPN+F FSSVLQASA +ESLDL KTIHGHAL+ GLSTDVFVSNALMACYAKCGCIEQSMELFE
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
        A SDRNDVSWNTII+SYVQLGDGE+ALSLF  MLRYQVQATEVTYSSILRACAT  ALELGLQ+ CLTAKTIYGQD AVGNALIDMYAK  SIKDA FMF
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
         ML+LRD+VSWNAIICGYSMHGLGVEAIKMF+LM
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

A0A1S3BZ35 putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial6.6e-10785.9Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MPKNDVI WSFMI+RF     +  ALEIFCQMRRAFV PN+F FSSVLQASAAMESLDL KTIHGHAL+ GLSTDVFVSNALMACYAKCGCIEQSMELFE
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
        A SDRNDVSWNTII+SYVQLGDGE+ALSLF  MLRYQVQATEVTYSSILRACAT  ALELGLQ+ CLTAKTIYGQD AVGNALIDMYAK  SIKDA FMF
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
         ML+LRD+VSWNAIICGYSMHGLGVEAIKMF+LM
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

A0A5A7TN29 Putative pentatricopeptide repeat-containing protein6.6e-10785.9Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MPKNDVI WSFMI+RF     +  ALEIFCQMRRAFV PN+F FSSVLQASAAMESLDL KTIHGHAL+ GLSTDVFVSNALMACYAKCGCIEQSMELFE
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
        A SDRNDVSWNTII+SYVQLGDGE+ALSLF  MLRYQVQATEVTYSSILRACAT  ALELGLQ+ CLTAKTIYGQD AVGNALIDMYAK  SIKDA FMF
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
         ML+LRD+VSWNAIICGYSMHGLGVEAIKMF+LM
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

A0A5D3E0N7 Putative pentatricopeptide repeat-containing protein6.6e-10785.9Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MPKNDVI WSFMI+RF     +  ALEIFCQMRRAFV PN+F FSSVLQASAAMESLDL KTIHGHAL+ GLSTDVFVSNALMACYAKCGCIEQSMELFE
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
        A SDRNDVSWNTII+SYVQLGDGE+ALSLF  MLRYQVQATEVTYSSILRACAT  ALELGLQ+ CLTAKTIYGQD AVGNALIDMYAK  SIKDA FMF
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
         ML+LRD+VSWNAIICGYSMHGLGVEAIKMF+LM
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

A0A6J1ISA9 putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial1.6e-10584.62Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MPK DVI WSFMIARF     +  ALE+FCQMRRAFV+PNEF FSSVLQASAAME+LDLG+TIHGHAL+ G+STDVFVSNALMACYAKCGCIE+SMELFE
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
        A SDRNDVSWNTII+ YVQLGDGEKALSLF  M RY VQ TEVTYSSILRACAT  ALELGLQI CLTAKTIYGQD AVGNALIDMYAK  SIKDA  MF
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACAT-DALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
         MLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

SwissProt top hitse value%identityAlignment
Q9LIC3 Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial9.1e-3736.75Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MP+ +V+ W+ MI+R+     +  AL +F +M R+   PNEF F++VL +      L LGK IHG  ++    + +FV ++L+  YAK G I+++ E+FE
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDA-LELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
           +R+ VS   II  Y QLG  E+AL +F ++    +    VTY+S+L A +  A L+ G Q  C   +        + N+LIDMY+K  ++  A  +F
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDA-LELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
          +  R  +SWNA++ GYS HGLG E +++F LM
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

Q9LIQ7 Pentatricopeptide repeat-containing protein At3g24000, mitochondrial1.6e-3637.18Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MP+ D + W+ +I+ +        AL  F QM R    PNEF  SSV++A+AA      G  +HG  ++ G  ++V V +AL+  Y + G ++ +  +F+
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRAC-ATDALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
        A   RNDVSWN +I  + +    EKAL LF  MLR   + +  +Y+S+  AC +T  LE G  +     K+        GN L+DMYAK  SI DA  +F
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRAC-ATDALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
          L  RD VSWN+++  Y+ HG G EA+  F+ M
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

Q9LW63 Putative pentatricopeptide repeat-containing protein At3g233304.5e-3635.47Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MP+ DV+ ++ +IA +        AL +  +M    + P+ F  SSVL   +    +  GK IHG+ +  G+ +DV++ ++L+  YAK   IE S  +F 
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDA-LELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
            R+ +SWN+++  YVQ G   +AL LF +M+  +V+   V +SS++ ACA  A L LG Q+     +  +G +  + +AL+DMY+K  +IK A  +F
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDA-LELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
          +N+ D VSW AII G+++HG G EA+ +F+ M
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

Q9LYV3 Putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial2.7e-5748.72Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MPKNDV+ WSFMIARF        A+++F +MR AFV+PNEF  SS+L   A  +   LG+ +HG  ++VG   D++VSNAL+  YAKC  ++ +++LF 
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDA-LELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
          S +N+VSWNT+I+ Y  LG+G KA S+F + LR QV  TEVT+SS L ACA+ A ++LG+Q+  L  KT   +  AV N+LIDMYAK   IK A  +F
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDA-LELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
          +   D  SWNA+I GYS HGLG +A+++ D+M
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

Q9SVP7 Pentatricopeptide repeat-containing protein At4g136504.5e-3636.52Show/hide
Query:  DVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFEAFSD
        DV+ W+ MIA +     +  AL  F QM    +  +E   ++ + A A +++L  G+ IH  A   G S+D+   NAL+  Y++CG IE+S   FE    
Subjt:  DVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFEAFSD

Query:  RNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDA-LELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMFVMLN
         ++++WN ++  + Q G+ E+AL +F +M R  +     T+ S ++A +  A ++ G Q+  +  KT Y  +T V NALI MYAK  SI DA   F+ ++
Subjt:  RNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDA-LELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMFVMLN

Query:  LRDRVSWNAIICGYSMHGLGVEAIKMFDLM
         ++ VSWNAII  YS HG G EA+  FD M
Subjt:  LRDRVSWNAIICGYSMHGLGVEAIKMFDLM

Arabidopsis top hitse value%identityAlignment
AT3G13770.1 Pentatricopeptide repeat (PPR) superfamily protein6.5e-3836.75Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MP+ +V+ W+ MI+R+     +  AL +F +M R+   PNEF F++VL +      L LGK IHG  ++    + +FV ++L+  YAK G I+++ E+FE
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDA-LELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
           +R+ VS   II  Y QLG  E+AL +F ++    +    VTY+S+L A +  A L+ G Q  C   +        + N+LIDMY+K  ++  A  +F
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDA-LELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
          +  R  +SWNA++ GYS HGLG E +++F LM
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

AT3G23330.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.2e-3735.47Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MP+ DV+ ++ +IA +        AL +  +M    + P+ F  SSVL   +    +  GK IHG+ +  G+ +DV++ ++L+  YAK   IE S  +F 
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDA-LELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
            R+ +SWN+++  YVQ G   +AL LF +M+  +V+   V +SS++ ACA  A L LG Q+     +  +G +  + +AL+DMY+K  +IK A  +F
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDA-LELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
          +N+ D VSW AII G+++HG G EA+ +F+ M
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

AT3G24000.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.1e-3737.18Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MP+ D + W+ +I+ +        AL  F QM R    PNEF  SSV++A+AA      G  +HG  ++ G  ++V V +AL+  Y + G ++ +  +F+
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRAC-ATDALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
        A   RNDVSWN +I  + +    EKAL LF  MLR   + +  +Y+S+  AC +T  LE G  +     K+        GN L+DMYAK  SI DA  +F
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRAC-ATDALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
          L  RD VSWN+++  Y+ HG G EA+  F+ M
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM

AT4G13650.1 Pentatricopeptide repeat (PPR) superfamily protein3.2e-3736.52Show/hide
Query:  DVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFEAFSD
        DV+ W+ MIA +     +  AL  F QM    +  +E   ++ + A A +++L  G+ IH  A   G S+D+   NAL+  Y++CG IE+S   FE    
Subjt:  DVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFEAFSD

Query:  RNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDA-LELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMFVMLN
         ++++WN ++  + Q G+ E+AL +F +M R  +     T+ S ++A +  A ++ G Q+  +  KT Y  +T V NALI MYAK  SI DA   F+ ++
Subjt:  RNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDA-LELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMFVMLN

Query:  LRDRVSWNAIICGYSMHGLGVEAIKMFDLM
         ++ VSWNAII  YS HG G EA+  FD M
Subjt:  LRDRVSWNAIICGYSMHGLGVEAIKMFDLM

AT5G13230.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.9e-5848.72Show/hide
Query:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE
        MPKNDV+ WSFMIARF        A+++F +MR AFV+PNEF  SS+L   A  +   LG+ +HG  ++VG   D++VSNAL+  YAKC  ++ +++LF 
Subjt:  MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFE

Query:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDA-LELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF
          S +N+VSWNT+I+ Y  LG+G KA S+F + LR QV  TEVT+SS L ACA+ A ++LG+Q+  L  KT   +  AV N+LIDMYAK   IK A  +F
Subjt:  AFSDRNDVSWNTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDA-LELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMF

Query:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM
          +   D  SWNA+I GYS HGLG +A+++ D+M
Subjt:  VMLNLRDRVSWNAIICGYSMHGLGVEAIKMFDLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAAAAACGATGTGATTCTATGGAGTTTCATGATTGCAAGATTTGAGGCAGAGTGGTCAAACGGAACGGCTTTGGAAATTTTTTGTCAAATGAGGAGAGCTTTTGT
TATACCCAATGAATTTGCATTTTCTAGTGTGCTCCAAGCTTCTGCAGCCATGGAGAGTTTAGATTTGGGTAAAACAATCCATGGACATGCACTTGAGGTTGGACTATCCA
CTGATGTGTTTGTGTCCAATGCCCTTATGGCTTGCTATGCTAAATGTGGGTGTATTGAACAATCTATGGAACTATTTGAGGCATTTTCAGACAGAAATGATGTTTCTTGG
AACACAATTATTTTAAGCTATGTGCAGTTGGGTGATGGAGAGAAGGCATTGAGTCTGTTTCCCAAGATGCTTAGATACCAAGTGCAGGCAACTGAAGTGACTTACTCTAG
CATCCTCCGTGCTTGTGCTACTGATGCCTTAGAACTTGGACTTCAGATTCGTTGCTTGACAGCTAAAACCATCTATGGCCAAGATACTGCAGTTGGTAATGCTTTGATAG
ATATGTATGCCAAGTTTAGTAGCATTAAAGATGCTCATTTTATGTTTGTCATGTTGAATCTACGAGACAGAGTTTCCTGGAATGCTATTATCTGTGGATATTCTATGCAT
GGTCTAGGAGTGGAGGCAATAAAAATGTTTGATCTTATGTATTCGGATCCAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTAAAAACGATGTGATTCTATGGAGTTTCATGATTGCAAGATTTGAGGCAGAGTGGTCAAACGGAACGGCTTTGGAAATTTTTTGTCAAATGAGGAGAGCTTTTGT
TATACCCAATGAATTTGCATTTTCTAGTGTGCTCCAAGCTTCTGCAGCCATGGAGAGTTTAGATTTGGGTAAAACAATCCATGGACATGCACTTGAGGTTGGACTATCCA
CTGATGTGTTTGTGTCCAATGCCCTTATGGCTTGCTATGCTAAATGTGGGTGTATTGAACAATCTATGGAACTATTTGAGGCATTTTCAGACAGAAATGATGTTTCTTGG
AACACAATTATTTTAAGCTATGTGCAGTTGGGTGATGGAGAGAAGGCATTGAGTCTGTTTCCCAAGATGCTTAGATACCAAGTGCAGGCAACTGAAGTGACTTACTCTAG
CATCCTCCGTGCTTGTGCTACTGATGCCTTAGAACTTGGACTTCAGATTCGTTGCTTGACAGCTAAAACCATCTATGGCCAAGATACTGCAGTTGGTAATGCTTTGATAG
ATATGTATGCCAAGTTTAGTAGCATTAAAGATGCTCATTTTATGTTTGTCATGTTGAATCTACGAGACAGAGTTTCCTGGAATGCTATTATCTGTGGATATTCTATGCAT
GGTCTAGGAGTGGAGGCAATAAAAATGTTTGATCTTATGTATTCGGATCCAACATAG
Protein sequenceShow/hide protein sequence
MPKNDVILWSFMIARFEAEWSNGTALEIFCQMRRAFVIPNEFAFSSVLQASAAMESLDLGKTIHGHALEVGLSTDVFVSNALMACYAKCGCIEQSMELFEAFSDRNDVSW
NTIILSYVQLGDGEKALSLFPKMLRYQVQATEVTYSSILRACATDALELGLQIRCLTAKTIYGQDTAVGNALIDMYAKFSSIKDAHFMFVMLNLRDRVSWNAIICGYSMH
GLGVEAIKMFDLMYSDPT