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HG10008551 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008551
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLYR motif-containing protein 4
Genome locationChr10:24097843..24098115
RNA-Seq ExpressionHG10008551
SyntenyHG10008551
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453246.1 PREDICTED: LYR motif-containing protein 4 [Cucumis melo]1.2e-3487.78Show/hide
Query:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN
        MAAPTRSEAL+LLRSL+RT+  FCDYNI+EYAKRR VDGFRHNRNLS P SISSAYADGKAQLEVAKRQSA+YSLYAPKVKSIMEAHR N
Subjt:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN

XP_011660289.1 LYR motif-containing protein 4 [Cucumis sativus]1.8e-3590Show/hide
Query:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN
        MA+PTRSEAL+LLRSL+RTA HF DYNI+EYAKRRAVDGFRHNRNLS PPSISSAYADGKAQLEVAKRQSAVYSLY PKVKSIMEAHR N
Subjt:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN

XP_022134602.1 LYR motif-containing protein 4-like [Momordica charantia]4.2e-3281.11Show/hide
Query:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN
        MA PTR+EAL+LLRSLLRTA HFCDYN++EYAKRRAVDGFRHNRNLS P SISSAYADG+AQLEVA+RQS VYS +APKVKSIM+ H  N
Subjt:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN

XP_022932898.1 LYR motif-containing protein 4 [Cucurbita moschata]2.2e-3385.56Show/hide
Query:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN
        MA PTRSE+L+LLRSLLRTA HFCDYNI+EYAKRRAVDGFRHNRNLS P SI  AYADGKAQLEVAKRQS VYSL++PKVKSIMEAH TN
Subjt:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN

XP_038879775.1 LYR motif-containing protein 4-like [Benincasa hispida]7.4e-3792.22Show/hide
Query:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN
        M APTRSEAL+LLRS LRTA HFCDYNI+EYAKRRAVDGFRHNRNLS PPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIME HRTN
Subjt:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN

TrEMBL top hitse value%identityAlignment
A0A0A0LPH2 Uncharacterized protein8.8e-3690Show/hide
Query:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN
        MA+PTRSEAL+LLRSL+RTA HF DYNI+EYAKRRAVDGFRHNRNLS PPSISSAYADGKAQLEVAKRQSAVYSLY PKVKSIMEAHR N
Subjt:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN

A0A1S3BV74 LYR motif-containing protein 45.7e-3587.78Show/hide
Query:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN
        MAAPTRSEAL+LLRSL+RT+  FCDYNI+EYAKRR VDGFRHNRNLS P SISSAYADGKAQLEVAKRQSA+YSLYAPKVKSIMEAHR N
Subjt:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN

A0A5A7UTC8 LYR motif-containing protein 45.7e-3587.78Show/hide
Query:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN
        MAAPTRSEAL+LLRSL+RT+  FCDYNI+EYAKRR VDGFRHNRNLS P SISSAYADGKAQLEVAKRQSA+YSLYAPKVKSIMEAHR N
Subjt:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN

A0A6J1F322 LYR motif-containing protein 41.1e-3385.56Show/hide
Query:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN
        MA PTRSE+L+LLRSLLRTA HFCDYNI+EYAKRRAVDGFRHNRNLS P SI  AYADGKAQLEVAKRQS VYSL++PKVKSIMEAH TN
Subjt:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN

A0A6J1IC29 LYR motif-containing protein 41.1e-3385.56Show/hide
Query:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN
        MA PTRSE+L+LLRSLLRTA HFCDYNI+EYAKRRAVDGFRHNRNLS P SI  AYADGKAQLEVAKRQS VYSL++PKVKSIMEAH TN
Subjt:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN

SwissProt top hitse value%identityAlignment
B8JLQ0 LYR motif-containing protein 41.2e-0533.77Show/hide
Query:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYA
        MA+ +R++ ++L R L++ +  F  YN + YA RR  DGFR N ++  P ++       +  L V KRQ ++  LY+
Subjt:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYA

O46098 Protein bcn925.9e-0535.29Show/hide
Query:  TRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRT
        TR +A+ L R+LLR +     YN + YA R+  D FR NR+      I    A+G+  LE+ +RQ  +  LY+   K ++E  +T
Subjt:  TRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRT

Q54FN9 LYR motif-containing protein 41.7e-0437.5Show/hide
Query:  RSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYA
        +S  L L RSL+R +  F  YN +EY+ RR   GFR N+N            D    LE+ KRQ+ + S+Y+
Subjt:  RSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYA

Q6Q560 Protein ISD119.2e-0633.78Show/hide
Query:  APTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLY
        APTR + L+L +  ++ A+ F +YN +EY   +    FR N N   P  + + + + K  L V KRQS +  +Y
Subjt:  APTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLY

Q8K215 LYR motif-containing protein 43.4e-0838.96Show/hide
Query:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYA
        MAA +R++ L L R+++R + HF  YN + YA RR  D FR N+N+  P  I +     K  LE+ +RQ  +  LY+
Subjt:  MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYA

Arabidopsis top hitse value%identityAlignment
AT5G61220.1 LYR family of Fe/S cluster biogenesis protein6.3e-1855.7Show/hide
Query:  SEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIME
        SE L+L R+LLR    F DYNI+EY+KRR +DGFR N+NL+ P  ++ AYA+ K QL VA+R   VY  Y PK K+IME
Subjt:  SEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCCAACGAGATCGGAGGCCCTTGCGCTTCTTCGCTCTCTGCTCCGTACAGCTAGTCACTTCTGCGATTACAACATCAAAGAGTACGCCAAACGACGTGCAGT
CGACGGCTTCCGCCATAACCGGAACCTTTCCGTTCCTCCATCCATCTCCTCCGCCTACGCGGACGGCAAGGCTCAGCTTGAAGTTGCTAAAAGACAATCCGCCGTCTACT
CCCTCTATGCGCCCAAGGTAAAGAGCATCATGGAGGCACATCGCACAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTCCAACGAGATCGGAGGCCCTTGCGCTTCTTCGCTCTCTGCTCCGTACAGCTAGTCACTTCTGCGATTACAACATCAAAGAGTACGCCAAACGACGTGCAGT
CGACGGCTTCCGCCATAACCGGAACCTTTCCGTTCCTCCATCCATCTCCTCCGCCTACGCGGACGGCAAGGCTCAGCTTGAAGTTGCTAAAAGACAATCCGCCGTCTACT
CCCTCTATGCGCCCAAGGTAAAGAGCATCATGGAGGCACATCGCACAAACTGA
Protein sequenceShow/hide protein sequence
MAAPTRSEALALLRSLLRTASHFCDYNIKEYAKRRAVDGFRHNRNLSVPPSISSAYADGKAQLEVAKRQSAVYSLYAPKVKSIMEAHRTN