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HG10008573 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008573
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING-type domain-containing protein
Genome locationChr10:24295577..24297112
RNA-Seq ExpressionHG10008573
SyntenyHG10008573
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004674 - protein serine/threonine kinase activity (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR019734 - Tetratricopeptide repeat


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN63691.1 hypothetical protein Csa_014182 [Cucumis sativus]4.6e-3690.48Show/hide
Query:  MAMPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
        MAM EPS SL MDSLGDIDDYIWANEGE  LPWDMFR VFEFVQNGN+AFK+NHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
Subjt:  MAMPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI

XP_004138180.2 probable receptor-like protein kinase At5g61350 [Cucumis sativus]4.6e-3690.48Show/hide
Query:  MAMPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
        MAM EPS SL MDSLGDIDDYIWANEGE  LPWDMFR VFEFVQNGN+AFK+NHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
Subjt:  MAMPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI

XP_016901376.1 PREDICTED: probable receptor-like protein kinase At5g61350 [Cucumis melo]1.0e-3589.29Show/hide
Query:  MAMPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
        MAM EPS SL +DSLGDIDDYIWANEGE  LPWDMFR VFEFVQNGN+AFK+NHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
Subjt:  MAMPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI

XP_022135219.1 LON peptidase N-terminal domain and RING finger protein 1 [Momordica charantia]7.8e-3690.24Show/hide
Query:  MPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
        M EPSSSLPMDSLGDIDDYIWANEGE  LPWDMF HVFEFVQ GN+AF+D+HFEEAIKYYSRANNIKPGDPVILNNRSAAYI
Subjt:  MPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI

XP_038878683.1 LON peptidase N-terminal domain and RING finger protein 1 [Benincasa hispida]2.0e-3995.24Show/hide
Query:  MAMPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
        MAMPEPSSSLPMDSLGDIDDYIWANEGE   PWDMF HVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
Subjt:  MAMPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI

TrEMBL top hitse value%identityAlignment
A0A0A0LUJ8 Uncharacterized protein2.2e-3690.48Show/hide
Query:  MAMPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
        MAM EPS SL MDSLGDIDDYIWANEGE  LPWDMFR VFEFVQNGN+AFK+NHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
Subjt:  MAMPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI

A0A1S4DZI1 probable receptor-like protein kinase At5g613504.9e-3689.29Show/hide
Query:  MAMPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
        MAM EPS SL +DSLGDIDDYIWANEGE  LPWDMFR VFEFVQNGN+AFK+NHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
Subjt:  MAMPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI

A0A5A7UWU6 Putative receptor-like protein kinase4.9e-3689.29Show/hide
Query:  MAMPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
        MAM EPS SL +DSLGDIDDYIWANEGE  LPWDMFR VFEFVQNGN+AFK+NHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
Subjt:  MAMPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI

A0A6J1C0T9 LON peptidase N-terminal domain and RING finger protein 13.8e-3690.24Show/hide
Query:  MPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
        M EPSSSLPMDSLGDIDDYIWANEGE  LPWDMF HVFEFVQ GN+AF+D+HFEEAIKYYSRANNIKPGDPVILNNRSAAYI
Subjt:  MPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI

A0A6J1EFL0 probable receptor-like protein kinase At5g613509.6e-3284.15Show/hide
Query:  MPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
        M +PS+SLP+DSLGDIDDYI ANEGE  L W+MF HVFEFVQNGNRAF+DN+FEEAIK YSRANNIKPGDPVILNNRSAAYI
Subjt:  MPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G18660.1 zinc finger (C3HC4-type RING finger) family protein3.3e-1651.43Show/hide
Query:  LGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
        L D+++Y    E ++ LP D+   VF+ V+ GN++FK++ FEEAI  YS+AN+IKP DP++L NRSAAYI
Subjt:  LGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI

AT1G18660.2 zinc finger (C3HC4-type RING finger) family protein3.3e-1651.43Show/hide
Query:  LGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
        L D+++Y    E ++ LP D+   VF+ V+ GN++FK++ FEEAI  YS+AN+IKP DP++L NRSAAYI
Subjt:  LGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI

AT1G18660.3 zinc finger (C3HC4-type RING finger) family protein3.3e-1651.43Show/hide
Query:  LGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
        L D+++Y    E ++ LP D+   VF+ V+ GN++FK++ FEEAI  YS+AN+IKP DP++L NRSAAYI
Subjt:  LGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI

AT1G18660.4 zinc finger (C3HC4-type RING finger) family protein3.3e-1651.43Show/hide
Query:  LGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI
        L D+++Y    E ++ LP D+   VF+ V+ GN++FK++ FEEAI  YS+AN+IKP DP++L NRSAAYI
Subjt:  LGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGCCCGAGCCTTCGTCCAGTTTGCCCATGGATTCTCTCGGCGACATCGATGACTACATTTGGGCCAATGAAGGAGAGGATCAATTGCCATGGGACATGTTCAG
GCATGTTTTTGAATTCGTACAAAATGGAAATCGAGCATTTAAAGATAACCACTTTGAAGAGGCAATCAAGTATTACTCTAGAGCTAATAACATCAAACCAGGTGATCCAG
TTATTCTCAACAATAGAAGTGCTGCTTATATCAGTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATGCCCGAGCCTTCGTCCAGTTTGCCCATGGATTCTCTCGGCGACATCGATGACTACATTTGGGCCAATGAAGGAGAGGATCAATTGCCATGGGACATGTTCAG
GCATGTTTTTGAATTCGTACAAAATGGAAATCGAGCATTTAAAGATAACCACTTTGAAGAGGCAATCAAGTATTACTCTAGAGCTAATAACATCAAACCAGGTGATCCAG
TTATTCTCAACAATAGAAGTGCTGCTTATATCAGTGGTTAA
Protein sequenceShow/hide protein sequence
MAMPEPSSSLPMDSLGDIDDYIWANEGEDQLPWDMFRHVFEFVQNGNRAFKDNHFEEAIKYYSRANNIKPGDPVILNNRSAAYISG