; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008582 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008582
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionphotosynthetic NDH subunit of subcomplex B 4, chloroplastic
Genome locationChr10:24369486..24370094
RNA-Seq ExpressionHG10008582
SyntenyHG10008582
Gene Ontology termsGO:0009773 - photosynthetic electron transport in photosystem I (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR034570 - Photosynthetic NDH subunit of subcomplex B 4, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453213.1 PREDICTED: photosynthetic NDH subunit of subcomplex B 4, chloroplastic [Cucumis melo]6.7e-5698.2Show/hide
Query:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG
        MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQ+VG
Subjt:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG

Query:  GLKELEEAGKK
        GL+ELEEAGKK
Subjt:  GLKELEEAGKK

XP_022933404.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic [Cucurbita moschata]2.0e-5597.3Show/hide
Query:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG
        MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARA+LWREELIEEIEQ+VG
Subjt:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG

Query:  GLKELEEAGKK
        GL+ELEEAGKK
Subjt:  GLKELEEAGKK

XP_022987205.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like [Cucurbita maxima]1.5e-5597.3Show/hide
Query:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG
        MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQ+VG
Subjt:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG

Query:  GLKELEEAGKK
        GL+ELEEAG+K
Subjt:  GLKELEEAGKK

XP_023516363.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like [Cucurbita pepo subsp. pepo]1.5e-5597.3Show/hide
Query:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG
        MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQ+VG
Subjt:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG

Query:  GLKELEEAGKK
        GL+ELEEAG+K
Subjt:  GLKELEEAGKK

XP_038880039.1 photosynthetic NDH subunit of subcomplex B 4, chloroplastic [Benincasa hispida]1.4e-56100Show/hide
Query:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG
        MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG
Subjt:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG

Query:  GLKELEEAGKK
        GLKELEEAGKK
Subjt:  GLKELEEAGKK

TrEMBL top hitse value%identityAlignment
A0A1S3BVN6 photosynthetic NDH subunit of subcomplex B 4, chloroplastic3.2e-5698.2Show/hide
Query:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG
        MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQ+VG
Subjt:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG

Query:  GLKELEEAGKK
        GL+ELEEAGKK
Subjt:  GLKELEEAGKK

A0A5A7UWT7 Photosynthetic NDH subunit of subcomplex B 43.2e-5698.2Show/hide
Query:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG
        MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQ+VG
Subjt:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG

Query:  GLKELEEAGKK
        GL+ELEEAGKK
Subjt:  GLKELEEAGKK

A0A6J1EZP2 photosynthetic NDH subunit of subcomplex B 4, chloroplastic9.5e-5697.3Show/hide
Query:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG
        MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARA+LWREELIEEIEQ+VG
Subjt:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG

Query:  GLKELEEAGKK
        GL+ELEEAGKK
Subjt:  GLKELEEAGKK

A0A6J1I7D8 photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like9.5e-5697.3Show/hide
Query:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG
        MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARA+LWREELIEEIEQ+VG
Subjt:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG

Query:  GLKELEEAGKK
        GL+ELEEAGKK
Subjt:  GLKELEEAGKK

A0A6J1JG67 photosynthetic NDH subunit of subcomplex B 4, chloroplastic-like7.2e-5697.3Show/hide
Query:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG
        MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQ+VG
Subjt:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG

Query:  GLKELEEAGKK
        GL+ELEEAG+K
Subjt:  GLKELEEAGKK

SwissProt top hitse value%identityAlignment
Q8RXS1 Photosynthetic NDH subunit of subcomplex B 4, chloroplastic3.6e-4474.77Show/hide
Query:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG
        MAV+V  ++G RD++T K + HLSD+AIKNVY  YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE QEDIEE ARA+LWREELIEEIEQ+VG
Subjt:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG

Query:  GLKELEEAGKK
        GL+ELEEA  K
Subjt:  GLKELEEAGKK

Arabidopsis top hitse value%identityAlignment
AT1G18730.1 NDH dependent flow 62.6e-4574.77Show/hide
Query:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG
        MAV+V  ++G RD++T K + HLSD+AIKNVY  YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE QEDIEE ARA+LWREELIEEIEQ+VG
Subjt:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG

Query:  GLKELEEAGKK
        GL+ELEEA  K
Subjt:  GLKELEEAGKK

AT1G18730.2 NDH dependent flow 65.7e-2971.23Show/hide
Query:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE
        MAV+V  ++G RD++T K + HLSD+AIKNVY  YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE
Subjt:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE

AT1G18730.3 NDH dependent flow 62.6e-4574.77Show/hide
Query:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG
        MAV+V  ++G RD++T K + HLSD+AIKNVY  YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE QEDIEE ARA+LWREELIEEIEQ+VG
Subjt:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVG

Query:  GLKELEEAGKK
        GL+ELEEA  K
Subjt:  GLKELEEAGKK

AT1G18730.4 NDH dependent flow 65.7e-2971.23Show/hide
Query:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE
        MAV+V  ++G RD++T K + HLSD+AIKNVY  YIMFTCWGCL+FGS KDP+YDSE YR DGGDGTG+WVYE
Subjt:  MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTCTAGTTGATCATTTGGATGGCCAAAGAGACCTTGTTACCCACAAATCCATAGTGCATCTTAGTGATGAAGCTATAAAGAATGTCTACAGTCTTTACATCAT
GTTCACATGTTGGGGTTGTTTGTTCTTTGGCTCTATGAAGGATCCATATTATGATTCAGAGGTGTACAGGAAAGATGGAGGAGATGGAACAGGACATTGGGTCTATGAGA
AGCAAGAGGACATTGAAGAAGCAGCAAGAGCAGACCTATGGAGGGAGGAGCTGATAGAGGAGATTGAGCAAAGGGTTGGAGGACTAAAAGAATTGGAAGAAGCTGGAAAG
AAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTTCTAGTTGATCATTTGGATGGCCAAAGAGACCTTGTTACCCACAAATCCATAGTGCATCTTAGTGATGAAGCTATAAAGAATGTCTACAGTCTTTACATCAT
GTTCACATGTTGGGGTTGTTTGTTCTTTGGCTCTATGAAGGATCCATATTATGATTCAGAGGTGTACAGGAAAGATGGAGGAGATGGAACAGGACATTGGGTCTATGAGA
AGCAAGAGGACATTGAAGAAGCAGCAAGAGCAGACCTATGGAGGGAGGAGCTGATAGAGGAGATTGAGCAAAGGGTTGGAGGACTAAAAGAATTGGAAGAAGCTGGAAAG
AAATAA
Protein sequenceShow/hide protein sequence
MAVLVDHLDGQRDLVTHKSIVHLSDEAIKNVYSLYIMFTCWGCLFFGSMKDPYYDSEVYRKDGGDGTGHWVYEKQEDIEEAARADLWREELIEEIEQRVGGLKELEEAGK
K