; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008584 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008584
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationChr10:24381836..24382794
RNA-Seq ExpressionHG10008584
SyntenyHG10008584
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009645 - response to low light intensity stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138171.1 chlorophyll a-b binding protein P4, chloroplastic [Cucumis sativus]8.7e-14498.81Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKL R LSVKPVSASSSSSFKVEAKKGEWLPGLPSP+YLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

XP_008453211.1 PREDICTED: chlorophyll a-b binding protein P4, chloroplastic [Cucumis melo]6.7e-14498.41Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKLHR LSVKPVSASSSSSFKVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

XP_022134700.1 chlorophyll a-b binding protein P4, chloroplastic [Momordica charantia]4.9e-13996.03Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCA+RSRFLSGSS KLHRELSVKPV+A SSSS KVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

XP_023516219.1 chlorophyll a-b binding protein P4, chloroplastic [Cucurbita pepo subsp. pepo]2.5e-13895.24Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCAARSRFL+GSSGKLHR LSVKPV+ASSSSSFKVEAKKGEWLPGLPSP YLNGSLPGDNGFDPL LAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF GN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

XP_038880569.1 chlorophyll a-b binding protein P4, chloroplastic [Benincasa hispida]6.0e-14599.21Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

TrEMBL top hitse value%identityAlignment
A0A0A0LSB4 Chlorophyll a-b binding protein, chloroplastic4.2e-14498.81Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKL R LSVKPVSASSSSSFKVEAKKGEWLPGLPSP+YLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

A0A1S3BV45 Chlorophyll a-b binding protein, chloroplastic3.2e-14498.41Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKLHR LSVKPVSASSSSSFKVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

A0A5A7UWR2 Chlorophyll a-b binding protein, chloroplastic3.2e-14498.41Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCAARSRFLSGSSGKLHR LSVKPVSASSSSSFKVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

A0A6J1BZ19 Chlorophyll a-b binding protein, chloroplastic2.4e-13996.03Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCA+RSRFLSGSS KLHRELSVKPV+A SSSS KVEAKKGEWLPGLPSP YLNGSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTFGGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

A0A6J1JG60 Chlorophyll a-b binding protein, chloroplastic2.6e-13894.84Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAAVFRPCAARSRFL+GSSGKLHR LSVKPV+ASSSSSFKVEAKKGEWLPGLPSP YLNGSLPGDNGFDPL LAEDPENL+W+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLPPNE GYPGGIFNPLNFAPT EA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKE+ANGRLAMLAFLGFIVQHNVTGKGPF+NLLQHISDPWHNTIVQTF GN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic7.8e-6348.95Show/hide
Query:  RSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKI
        ++ FL G   ++ +  +     ++++     +  +  W PG   P +L+GSLPGD GFDPLGLA DPE+LRW  QAELV+ RWAMLG AG+ +PE+ TKI
Subjt:  RSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKI

Query:  GIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APTLEAKEKEIANGRLAM
        GI+N P WY AG+ EYF  ++TLF++E +L  + E RRW DI  PGCVN DPIF    L   + GYPGG+ F+PL +     A   E + KEI NGRLAM
Subjt:  GIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APTLEAKEKEIANGRLAM

Query:  LAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
        LA +G   QH  TG GP DNL  H++DP H TI   F
Subjt:  LAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF

P13869 Chlorophyll a-b binding protein, chloroplastic7.8e-6348.95Show/hide
Query:  AARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT
        A ++ FL G   ++ + ++     + + S+   +  +  W PG   P +L+GSLPGD GFDPLGL  DPE+L+W  QAELV+ RWAMLG AG+ +PE  T
Subjt:  AARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT

Query:  KIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APTLEAKEKEIANGRL
        KIG++N P WY AG+ EYF  ++TLFVIE +L  + E RRW DI  PGCVN DPIF    L   + GYPGG+ F+PL +     A   E + KEI NGRL
Subjt:  KIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APTLEAKEKEIANGRL

Query:  AMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
        AMLA +G   QH  TG GP DNL  H++DP H TI   F
Subjt:  AMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF

P27521 Chlorophyll a-b binding protein 4, chloroplastic3.2e-12584.4Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPV-SASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNG
        MATVTT ASA++FRPC ++ RFL+GSSG+L+R+LS   + S++ +SSFKVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENL+W+VQAELVNG
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPV-SASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNG

Query:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLE
        RWAMLGVAGMLLPEVFTKIGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLP  E GYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
        AKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+NLLQH+SDPWHNTIVQTF
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF

Q36718 Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)2.4e-8866.25Show/hide
Query:  FRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLP
        FR     S   SGS     R+++V+               KG WLPGL SP YL+GSL GDNGFDPL LAEDPE+LRW+VQA++VNGRWAMLGVAGML+P
Subjt:  FRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLP

Query:  EVFTKIGIINAPQWYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEAKEKEIANGRLA
        EV TK G++NAP+W    GK  YFASSST   +  +   YVEIRRWQDIKNPG VNQDPIFK YSLPP+ECGYPG +FNPLNFAP LE KEKE+ANGRLA
Subjt:  EVFTKIGIINAPQWYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEAKEKEIANGRLA

Query:  MLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGG
        MLAFLGF+VQHNV GKGPF+NL QH++DPWHNTI+QT  G
Subjt:  MLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGG

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic2.8e-12987.3Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVTTQASAA+F PC  +SRFL GSSGKL+R ++ +PV  S S+SFKVEAKKGEWLPGL SP YL GSLPGDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA
        WAMLGVAGMLLPEVFT IGIIN P+WY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPG VNQDPIFKQYSLP  E GYPGGIFNPLNFAPTLEA
Subjt:  WAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEA

Query:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNLLQHISDPWHNTIVQT GGN
Subjt:  KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 66.8e-5441.31Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSS--GKLHRE--LSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAEL
        + +  T +++ V  P   R    S SS  G+L RE  + V+     SS    +   +  W PG   P +L+GSLPGD GFDPLGL  DP+ L+W+ QAEL
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSS--GKLHRE--LSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAEL

Query:  VNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNF--
        ++ RWAML V G+++PE   ++G I    WYDAG  EYFA S+TLFV + +L  + E RRW D+  PG V+ +P +     P  + GYPGG++       
Subjt:  VNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNF--

Query:  ----APTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
             P +  + KEI NGRLAMLAFLGF  Q   T + P +NL+ H++DP H  +   F
Subjt:  ----APTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF

AT1G45474.1 photosystem I light harvesting complex gene 58.6e-5747.3Show/hide
Query:  SSGKLHRELSVKPVSASSSSSFK---------VEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT
        + G LH       V     SS K         V  ++  WLPGL  P YL+G+L GD GFDPLGL EDPE+L+WYVQAELV+ R+AMLGVAG+L  ++  
Subjt:  SSGKLHRELSVKPVSASSSSSFK---------VEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT

Query:  KIGIINAPQWYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAPTLEA----KEKEIAN
          GI N P WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PG   ++  F    + +L   E GYPGG + NPL  A  ++     K KEI N
Subjt:  KIGIINAPQWYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAPTLEA----KEKEIAN

Query:  GRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQT
        GRLAM+A LGF VQ +VT  GP DNL++H+S+PWH TI+QT
Subjt:  GRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQT

AT1G45474.2 photosystem I light harvesting complex gene 58.6e-5747.3Show/hide
Query:  SSGKLHRELSVKPVSASSSSSFK---------VEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT
        + G LH       V     SS K         V  ++  WLPGL  P YL+G+L GD GFDPLGL EDPE+L+WYVQAELV+ R+AMLGVAG+L  ++  
Subjt:  SSGKLHRELSVKPVSASSSSSFK---------VEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFT

Query:  KIGIINAPQWYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAPTLEA----KEKEIAN
          GI N P WY+AG  ++ FAS+ TL V++F+L  + E +R+ D  +PG   ++  F    + +L   E GYPGG + NPL  A  ++     K KEI N
Subjt:  KIGIINAPQWYDAGKAEY-FASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIF---KQYSLPPNECGYPGG-IFNPLNFAPTLEA----KEKEIAN

Query:  GRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQT
        GRLAM+A LGF VQ +VT  GP DNL++H+S+PWH TI+QT
Subjt:  GRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQT

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A42.3e-12684.4Show/hide
Query:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPV-SASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNG
        MATVTT ASA++FRPC ++ RFL+GSSG+L+R+LS   + S++ +SSFKVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENL+W+VQAELVNG
Subjt:  MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPV-SASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNG

Query:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLE
        RWAMLGVAGMLLPEVFTKIGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFKQYSLP  E GYPGGIFNPLNFAPT E
Subjt:  RWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLE

Query:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
        AKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+NLLQH+SDPWHNTIVQTF
Subjt:  AKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF

AT3G61470.1 photosystem I light harvesting complex gene 27.3e-6449.6Show/hide
Query:  TQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGE--WLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM
        + A AA+  P      FL G   +L ++L+V  VS   +S   V A      W PG   P +L+GSLPGD GFDPLGL+ DP++L+W VQAE+V+ RWAM
Subjt:  TQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGE--WLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAM

Query:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APT
        LG AG+ +PE  TKIGI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PG VN DP+F    L   + GYPGG+ F+PL +     A  
Subjt:  LGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGI-FNPLNF-----APT

Query:  LEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF
         E + KEI NGRLAMLA +G   QH  TG GP DNL  H++DP H TI   F
Subjt:  LEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTGTCACTACTCAAGCTTCCGCCGCCGTTTTCCGGCCATGCGCCGCCCGATCAAGATTCCTTTCTGGTTCTTCCGGTAAACTCCACCGTGAGCTCTCGGTTAA
ACCAGTCTCTGCTTCGTCGTCTTCATCTTTCAAGGTTGAAGCCAAGAAGGGAGAATGGTTGCCTGGTCTGCCATCTCCGGTGTACTTAAATGGCAGTCTTCCGGGCGATA
ATGGATTTGACCCACTAGGTTTAGCGGAAGACCCAGAGAATTTGAGGTGGTACGTGCAAGCGGAGCTGGTGAATGGGCGGTGGGCGATGCTGGGTGTCGCCGGAATGCTT
CTGCCGGAGGTTTTCACGAAGATCGGAATCATCAACGCTCCTCAGTGGTACGACGCCGGAAAGGCAGAGTACTTCGCCTCGTCGTCAACTCTGTTCGTGATCGAGTTTAT
CCTCTTCCATTACGTCGAAATCCGCAGATGGCAAGACATTAAAAACCCTGGCTGCGTTAACCAAGACCCCATTTTCAAGCAATACAGTTTGCCCCCAAATGAATGTGGTT
ACCCTGGTGGGATTTTCAATCCCCTGAATTTCGCCCCCACTCTTGAAGCCAAAGAGAAGGAAATAGCCAATGGGAGACTTGCGATGTTGGCGTTCTTGGGGTTCATTGTG
CAACACAACGTGACAGGGAAGGGGCCATTTGACAACCTTTTGCAGCACATTTCTGACCCATGGCACAACACCATTGTTCAGACATTTGGTGGCAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTGTCACTACTCAAGCTTCCGCCGCCGTTTTCCGGCCATGCGCCGCCCGATCAAGATTCCTTTCTGGTTCTTCCGGTAAACTCCACCGTGAGCTCTCGGTTAA
ACCAGTCTCTGCTTCGTCGTCTTCATCTTTCAAGGTTGAAGCCAAGAAGGGAGAATGGTTGCCTGGTCTGCCATCTCCGGTGTACTTAAATGGCAGTCTTCCGGGCGATA
ATGGATTTGACCCACTAGGTTTAGCGGAAGACCCAGAGAATTTGAGGTGGTACGTGCAAGCGGAGCTGGTGAATGGGCGGTGGGCGATGCTGGGTGTCGCCGGAATGCTT
CTGCCGGAGGTTTTCACGAAGATCGGAATCATCAACGCTCCTCAGTGGTACGACGCCGGAAAGGCAGAGTACTTCGCCTCGTCGTCAACTCTGTTCGTGATCGAGTTTAT
CCTCTTCCATTACGTCGAAATCCGCAGATGGCAAGACATTAAAAACCCTGGCTGCGTTAACCAAGACCCCATTTTCAAGCAATACAGTTTGCCCCCAAATGAATGTGGTT
ACCCTGGTGGGATTTTCAATCCCCTGAATTTCGCCCCCACTCTTGAAGCCAAAGAGAAGGAAATAGCCAATGGGAGACTTGCGATGTTGGCGTTCTTGGGGTTCATTGTG
CAACACAACGTGACAGGGAAGGGGCCATTTGACAACCTTTTGCAGCACATTTCTGACCCATGGCACAACACCATTGTTCAGACATTTGGTGGCAACTAA
Protein sequenceShow/hide protein sequence
MATVTTQASAAVFRPCAARSRFLSGSSGKLHRELSVKPVSASSSSSFKVEAKKGEWLPGLPSPVYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGML
LPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIV
QHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN