; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008592 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008592
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein EMBRYO DEFECTIVE 514-like
Genome locationChr10:24416972..24419472
RNA-Seq ExpressionHG10008592
SyntenyHG10008592
Gene Ontology termsGO:0017126 - nucleologenesis (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR044673 - Protein DCL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023193.1 Protein EMBRYO DEFECTIVE, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-8978.37Show/hide
Query:  MAEETIPQP--NDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEP
        MAEETIPQP  ND EVTN+  EDMELENTE   E KGSND  EANEAA  TN D+NSKR REEESAD  V + KKQKMEKSVEE R+EKA GDGKGEEEP
Subjt:  MAEETIPQP--NDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEP

Query:  VPVSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPL
         PV++GPKSFRSS ELFD+FYK LHHWP  LNVNQYE+M+L+DLLKKGH EPEKKIGCGIH+FQIR HP+WK+KCFFLIREDES DDFSFRKCVDHILPL
Subjt:  VPVSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPL

Query:  PENFKGKSDANRALGGGKHR---GGRGGGG---GRGRGGGGRWRN
        PEN KG+SDAN+A GGGKHR   GGRGGGG   GRG GGGGRWRN
Subjt:  PENFKGKSDANRALGGGKHR---GGRGGGG---GRGRGGGGRWRN

XP_008453205.1 PREDICTED: protein DCL, chloroplastic [Cucumis melo]3.6e-9986.55Show/hide
Query:  MAEETIPQPNDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVP
        MAEETIPQ  DPEVTNS TEDMELE T      KGS+DASEA EAA   N D+NSKR R EESADDGVGDGKKQK+EKSVEEER+EK GGDGK EEEPVP
Subjt:  MAEETIPQPNDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVP

Query:  VSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPLPE
        VSLGPKSFRSS+ELFDYFYKILH+WP+NLNVNQYEQMVLVDLLKKGH+EPEKKIGCGI AFQIR+HP+WKSKCFFLIREDESADDFSFRKCVDHILPLPE
Subjt:  VSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPLPE

Query:  NFKGKSDANRALGGGKHR-GGRGGGGGRGRGGGGRWRN
        NFK KSDANRALGGGKHR GGRGGGGGRGRGGGGRWRN
Subjt:  NFKGKSDANRALGGGKHR-GGRGGGGGRGRGGGGRWRN

XP_011660085.1 protein EMBRYO DEFECTIVE 514 [Cucumis sativus]5.6e-10087.39Show/hide
Query:  MAEETIPQPNDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVP
        MAEETIPQ  DPEVTNS TEDMELE T    E K S DASEANEAA   N D+ SKR R EESADDGV DGKKQK+EKSVEEERLEK GGDGK EEEPVP
Subjt:  MAEETIPQPNDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVP

Query:  VSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPLPE
        VSLGPKSFRSS+ELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGH+EPEKKIGCGIH+FQIR+HP WKSKCFFLIREDESADDFSFRKCVDHILPLPE
Subjt:  VSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPLPE

Query:  NFKGKSDANRALGGGKHR-GGRGGGGGRGRGGGGRWRN
        NFKGK DANRALGGGKHR GGRGGGGGRGRGGGGRWRN
Subjt:  NFKGKSDANRALGGGKHR-GGRGGGGGRGRGGGGRWRN

XP_022921344.1 protein EMBRYO DEFECTIVE 514-like [Cucurbita moschata]5.2e-9078.69Show/hide
Query:  MAEETIPQP--NDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEP
        MAEETIPQP  N+ EVTN+  EDMELENTE V E KGSND  EANEAA  TN D+NSKR REEESAD  V + KKQKMEKSVEE R+EKA GDGKGEEEP
Subjt:  MAEETIPQP--NDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEP

Query:  VPVSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPL
         PV++GPKSFRSS ELFD+FYK LHHWP  LNVNQYE+M+L+DLLKKGH EPEKKIGCGIH+FQIR HP+WK+KCFFLIREDES DDFSFRKCVDHILPL
Subjt:  VPVSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPL

Query:  PENFKGKSDANRALGGGKHRGG----RGGGGGRGR-GGGGRWRN
        PEN KG+SDAN+A GGGKHRGG     GGGGGRGR GGGGRWRN
Subjt:  PENFKGKSDANRALGGGKHRGG----RGGGGGRGR-GGGGRWRN

XP_038880608.1 protein EMBRYO DEFECTIVE 514 [Benincasa hispida]5.6e-10086.25Show/hide
Query:  MAEETIPQ--PNDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKG-EEE
        MAEETIPQ   NDP VTNS TEDMELE TE    +K S + SEA EA   TN DS SKR REEESADDGVGDGKKQK+EKSVEEER EK GGDGKG EEE
Subjt:  MAEETIPQ--PNDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKG-EEE

Query:  PVPVSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILP
        PV VSLGPKSF+SS+ELFDYFYKILHHWPVNLNVNQYEQM LVDLLKKGHVEPEKKIGCGIHAFQIRYHP+WKSKCFFLIREDESADDFSFRKCVDHILP
Subjt:  PVPVSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILP

Query:  LPENFKGKSDANRALGGGKHR-GGRGGGGGRGRGGGGRWR
        LPENFKGKSDANRALGGGKHR GGRGGGGGRGR GGGRWR
Subjt:  LPENFKGKSDANRALGGGKHR-GGRGGGGGRGRGGGGRWR

TrEMBL top hitse value%identityAlignment
A0A0A0LRN9 Uncharacterized protein2.7e-10087.39Show/hide
Query:  MAEETIPQPNDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVP
        MAEETIPQ  DPEVTNS TEDMELE T    E K S DASEANEAA   N D+ SKR R EESADDGV DGKKQK+EKSVEEERLEK GGDGK EEEPVP
Subjt:  MAEETIPQPNDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVP

Query:  VSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPLPE
        VSLGPKSFRSS+ELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGH+EPEKKIGCGIH+FQIR+HP WKSKCFFLIREDESADDFSFRKCVDHILPLPE
Subjt:  VSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPLPE

Query:  NFKGKSDANRALGGGKHR-GGRGGGGGRGRGGGGRWRN
        NFKGK DANRALGGGKHR GGRGGGGGRGRGGGGRWRN
Subjt:  NFKGKSDANRALGGGKHR-GGRGGGGGRGRGGGGRWRN

A0A1S3BWT9 protein DCL, chloroplastic1.7e-9986.55Show/hide
Query:  MAEETIPQPNDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVP
        MAEETIPQ  DPEVTNS TEDMELE T      KGS+DASEA EAA   N D+NSKR R EESADDGVGDGKKQK+EKSVEEER+EK GGDGK EEEPVP
Subjt:  MAEETIPQPNDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVP

Query:  VSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPLPE
        VSLGPKSFRSS+ELFDYFYKILH+WP+NLNVNQYEQMVLVDLLKKGH+EPEKKIGCGI AFQIR+HP+WKSKCFFLIREDESADDFSFRKCVDHILPLPE
Subjt:  VSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPLPE

Query:  NFKGKSDANRALGGGKHR-GGRGGGGGRGRGGGGRWRN
        NFK KSDANRALGGGKHR GGRGGGGGRGRGGGGRWRN
Subjt:  NFKGKSDANRALGGGKHR-GGRGGGGGRGRGGGGRWRN

A0A5A7UQ03 Protein DCL1.7e-9986.55Show/hide
Query:  MAEETIPQPNDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVP
        MAEETIPQ  DPEVTNS TEDMELE T      KGS+DASEA EAA   N D+NSKR R EESADDGVGDGKKQK+EKSVEEER+EK GGDGK EEEPVP
Subjt:  MAEETIPQPNDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVP

Query:  VSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPLPE
        VSLGPKSFRSS+ELFDYFYKILH+WP+NLNVNQYEQMVLVDLLKKGH+EPEKKIGCGI AFQIR+HP+WKSKCFFLIREDESADDFSFRKCVDHILPLPE
Subjt:  VSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPLPE

Query:  NFKGKSDANRALGGGKHR-GGRGGGGGRGRGGGGRWRN
        NFK KSDANRALGGGKHR GGRGGGGGRGRGGGGRWRN
Subjt:  NFKGKSDANRALGGGKHR-GGRGGGGGRGRGGGGRWRN

A0A6J1E069 protein EMBRYO DEFECTIVE 514-like2.5e-9078.69Show/hide
Query:  MAEETIPQP--NDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEP
        MAEETIPQP  N+ EVTN+  EDMELENTE V E KGSND  EANEAA  TN D+NSKR REEESAD  V + KKQKMEKSVEE R+EKA GDGKGEEEP
Subjt:  MAEETIPQP--NDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEP

Query:  VPVSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPL
         PV++GPKSFRSS ELFD+FYK LHHWP  LNVNQYE+M+L+DLLKKGH EPEKKIGCGIH+FQIR HP+WK+KCFFLIREDES DDFSFRKCVDHILPL
Subjt:  VPVSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPL

Query:  PENFKGKSDANRALGGGKHRGG----RGGGGGRGR-GGGGRWRN
        PEN KG+SDAN+A GGGKHRGG     GGGGGRGR GGGGRWRN
Subjt:  PENFKGKSDANRALGGGKHRGG----RGGGGGRGR-GGGGRWRN

A0A6J1JDH2 protein EMBRYO DEFECTIVE 514-like4.8e-8976.52Show/hide
Query:  MAEETIPQP--NDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEP
        MAEETIPQP  N+ EVTN+  EDMELENTE   E KGSND  EANEA+  TN D+NSKR REEESAD  V + KKQKMEKSVEE R+EKA GDGKGEEEP
Subjt:  MAEETIPQP--NDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEP

Query:  VPVSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPL
         PV++GPKSFRSS ELFD+FYK LHHWP  LNVNQYE+M+L+DLLKKGH EPEKKIGCGIH+FQIR HPMWK+KCFFLIREDES DDFSFRKCVDHILPL
Subjt:  VPVSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPL

Query:  PENFKGKSDANRALGGGKHRGGRG--------GGGGRGRGGGGRWRN
        PEN KG+SDAN+A GGGKHRGG G        GGGG GRG GGRWRN
Subjt:  PENFKGKSDANRALGGGKHRGGRG--------GGGGRGRGGGGRWRN

SwissProt top hitse value%identityAlignment
Q42463 Protein DCL, chloroplastic4.9e-0625.78Show/hide
Query:  KKQKMEKSVEEERLEKAGGDGKGEEEPVPVSLGPKSFRSSLELFDYFYKILH--HWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMW
        + +++ K   ++ + K  GDG+G      V    +    ++ L  +   ILH   + +   ++   Q  ++  L   H E +KKIG G+    + YHP +
Subjt:  KKQKMEKSVEEERLEKAGGDGKGEEEPVPVSLGPKSFRSSLELFDYFYKILH--HWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMW

Query:  K-SKCFFLIREDESADDFSFRKCVDHIL
        + S+C F++R+D    DFS+ KC+  ++
Subjt:  K-SKCFFLIREDESADDFSFRKCVDHIL

Q8L557 Protein EMBRYO DEFECTIVE 5142.6e-4454.82Show/hide
Query:  EAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVPVSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLL
        E A+   +  + KR REE   ++  G+ KKQK+ +                EE+  PV LGPK F +S+ +FDYF K LH WP +L+VN+YE MVL+DL+
Subjt:  EAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVPVSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLL

Query:  KKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGRGGGGGR--GRGG--GGRWR
        KKGH EPEKKIG GI  FQ+R HPMWKS+CFFL+RED++ADDFSFRKCVD ILPLPEN K          G  H GGRGGGGGR  GRGG  GGR+R
Subjt:  KKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGRGGGGGR--GRGG--GGRWR

Q9LQ02 DNA-directed RNA polymerase IV subunit 12.0e-0432.58Show/hide
Query:  DGKGEEEPVPVSLGPKSFR-SSLELFDYFYK-ILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSF
        DGKG    +P+SL    F   ++EL     K ILH + +N  +N+ ++  LV ++ + H    +KIG G+   ++       S CF ++R D + +DFS+
Subjt:  DGKGEEEPVPVSLGPKSFR-SSLELFDYFYK-ILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSF

Query:  RKCV----DHILPLPENF-KGKSDANRALGGG
         KCV      I P   NF K K   N  L  G
Subjt:  RKCV----DHILPLPENF-KGKSDANRALGGG

Arabidopsis top hitse value%identityAlignment
AT1G45230.1 Protein of unknown function (DUF3223)1.2e-0425.9Show/hide
Query:  KGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVPVSLGPKSFRSSLELFDYFYKILH--HWPVNLNV
        +G + +      A  T  D  +K G  E    + +   +    E S EEE  E+   +G        V    K    ++ L  +   ILH   +     +
Subjt:  KGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVPVSLGPKSFRSSLELFDYFYKILH--HWPVNLNV

Query:  NQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWK-SKCFFLIREDESADDFSFRKCVDHIL
        +   +  ++++L   H E EKKIGCGI    + +HP ++ S+C F++R+D    DFS+ KC+  ++
Subjt:  NQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWK-SKCFFLIREDESADDFSFRKCVDHIL

AT1G45230.2 Protein of unknown function (DUF3223)1.6e-0425.9Show/hide
Query:  KGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVPVSLGPKSFRSSLELFDYFYKILH--HWPVNLNV
        +G + +      A  T  D  +K G  E    + +   +    E S EEE  E+   +G        V    K    ++ L  +   ILH   +     +
Subjt:  KGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVPVSLGPKSFRSSLELFDYFYKILH--HWPVNLNV

Query:  NQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWK-SKCFFLIREDESADDFSFRKCVDHIL
        +   +  ++++L   H E EKKIGCGI    + +HP ++ S+C F++R+D    DFS+ KC+  ++
Subjt:  NQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWK-SKCFFLIREDESADDFSFRKCVDHIL

AT1G63020.1 nuclear RNA polymerase D1A1.4e-0532.58Show/hide
Query:  DGKGEEEPVPVSLGPKSFR-SSLELFDYFYK-ILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSF
        DGKG    +P+SL    F   ++EL     K ILH + +N  +N+ ++  LV ++ + H    +KIG G+   ++       S CF ++R D + +DFS+
Subjt:  DGKGEEEPVPVSLGPKSFR-SSLELFDYFYK-ILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSF

Query:  RKCV----DHILPLPENF-KGKSDANRALGGG
         KCV      I P   NF K K   N  L  G
Subjt:  RKCV----DHILPLPENF-KGKSDANRALGGG

AT1G63020.2 nuclear RNA polymerase D1A1.4e-0532.58Show/hide
Query:  DGKGEEEPVPVSLGPKSFR-SSLELFDYFYK-ILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSF
        DGKG    +P+SL    F   ++EL     K ILH + +N  +N+ ++  LV ++ + H    +KIG G+   ++       S CF ++R D + +DFS+
Subjt:  DGKGEEEPVPVSLGPKSFR-SSLELFDYFYK-ILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSF

Query:  RKCV----DHILPLPENF-KGKSDANRALGGG
         KCV      I P   NF K K   N  L  G
Subjt:  RKCV----DHILPLPENF-KGKSDANRALGGG

AT5G62440.1 Protein of unknown function (DUF3223)1.9e-4554.82Show/hide
Query:  EAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVPVSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLL
        E A+   +  + KR REE   ++  G+ KKQK+ +                EE+  PV LGPK F +S+ +FDYF K LH WP +L+VN+YE MVL+DL+
Subjt:  EAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVPVSLGPKSFRSSLELFDYFYKILHHWPVNLNVNQYEQMVLVDLL

Query:  KKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGRGGGGGR--GRGG--GGRWR
        KKGH EPEKKIG GI  FQ+R HPMWKS+CFFL+RED++ADDFSFRKCVD ILPLPEN K          G  H GGRGGGGGR  GRGG  GGR+R
Subjt:  KKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGRGGGGGR--GRGG--GGRWR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAGAGACAATCCCTCAACCAAACGATCCGGAGGTAACCAACTCAGCCACCGAGGATATGGAATTGGAAAATACAGAGGCTGTGGTAGAGTCGAAAGGATCAAA
TGATGCTTCCGAAGCAAATGAGGCCGCTTCAGCAACTAATGACGATTCAAATTCTAAGCGAGGGAGGGAGGAAGAAAGCGCCGATGACGGTGTTGGAGACGGAAAAAAGC
AGAAGATGGAGAAGTCGGTTGAGGAGGAAAGGCTTGAGAAGGCGGGAGGAGACGGGAAGGGAGAGGAGGAGCCTGTTCCTGTGAGTCTAGGCCCCAAGAGCTTTCGATCT
TCGTTGGAATTGTTCGATTACTTCTACAAGATCCTCCATCACTGGCCTGTCAACTTGAACGTGAACCAGTACGAGCAGATGGTGCTGGTGGATTTGCTTAAAAAGGGGCA
TGTAGAACCAGAGAAAAAGATCGGCTGCGGTATTCACGCCTTCCAAATTCGATACCATCCTATGTGGAAAAGCAAGTGCTTCTTCCTCATTCGGGAGGACGAGTCTGCTG
ATGACTTCAGCTTCAGAAAGTGTGTGGATCATATCCTTCCTCTGCCTGAAAACTTCAAAGGAAAATCTGATGCAAACAGAGCATTAGGTGGTGGTAAGCACCGCGGTGGA
CGAGGCGGGGGTGGTGGACGTGGAAGAGGAGGAGGGGGTAGGTGGAGAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAGAGACAATCCCTCAACCAAACGATCCGGAGGTAACCAACTCAGCCACCGAGGATATGGAATTGGAAAATACAGAGGCTGTGGTAGAGTCGAAAGGATCAAA
TGATGCTTCCGAAGCAAATGAGGCCGCTTCAGCAACTAATGACGATTCAAATTCTAAGCGAGGGAGGGAGGAAGAAAGCGCCGATGACGGTGTTGGAGACGGAAAAAAGC
AGAAGATGGAGAAGTCGGTTGAGGAGGAAAGGCTTGAGAAGGCGGGAGGAGACGGGAAGGGAGAGGAGGAGCCTGTTCCTGTGAGTCTAGGCCCCAAGAGCTTTCGATCT
TCGTTGGAATTGTTCGATTACTTCTACAAGATCCTCCATCACTGGCCTGTCAACTTGAACGTGAACCAGTACGAGCAGATGGTGCTGGTGGATTTGCTTAAAAAGGGGCA
TGTAGAACCAGAGAAAAAGATCGGCTGCGGTATTCACGCCTTCCAAATTCGATACCATCCTATGTGGAAAAGCAAGTGCTTCTTCCTCATTCGGGAGGACGAGTCTGCTG
ATGACTTCAGCTTCAGAAAGTGTGTGGATCATATCCTTCCTCTGCCTGAAAACTTCAAAGGAAAATCTGATGCAAACAGAGCATTAGGTGGTGGTAAGCACCGCGGTGGA
CGAGGCGGGGGTGGTGGACGTGGAAGAGGAGGAGGGGGTAGGTGGAGAAACTGA
Protein sequenceShow/hide protein sequence
MAEETIPQPNDPEVTNSATEDMELENTEAVVESKGSNDASEANEAASATNDDSNSKRGREEESADDGVGDGKKQKMEKSVEEERLEKAGGDGKGEEEPVPVSLGPKSFRS
SLELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIHAFQIRYHPMWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGG
RGGGGGRGRGGGGRWRN