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HG10008593 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008593
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCLAVATA3/ESR-RELATED
Genome locationChr10:24426992..24427270
RNA-Seq ExpressionHG10008593
SyntenyHG10008593
Gene Ontology termsNA
InterPro domainsIPR038821 - CLE-related protein 45-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587538.1 hypothetical protein SDJN03_16103, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2470.21Show/hide
Query:  LFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPIINTHNRADSVKKL-----NLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        + + K L+F  ++AG  LC +QPQTA+GL+TID+ALKWVA+KSPI NTHN  DSVKKL     +LAPSPAM+FDPNQSNKRGVKKGSDPIHNRS
Subjt:  LFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPIINTHNRADSVKKL-----NLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

KAG6589506.1 hypothetical protein SDJN03_14929, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2873.96Show/hide
Query:  MGFLFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPIINTHNRADSVKKLNL-----APSPAMNFDPNQSNKRGVKKGSDPIHNR
        MGFLF RK L F+F++AGF+  LLQPQTA+GL+TIDVALKWVA+KSP I+TH   DS KKLN+     APSPAMNFDPNQSNKR VKKGSDPIHNR
Subjt:  MGFLFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPIINTHNRADSVKKLNL-----APSPAMNFDPNQSNKRGVKKGSDPIHNR

KGN63668.1 hypothetical protein Csa_014085 [Cucumis sativus]3.0e-2577.78Show/hide
Query:  MGFLFNRKGLMFVFIVAGFLLCLL--QPQ-TATGLSTIDVALKWVAYKSP-IINTHNRADS--VKKLNL-APSPAMNFDPNQSNKRGVKKGSDPIHNRS
        MG LF+RKGL FVF+VA FLLC+L  QPQ TA GLSTID ALKWVA+KS   INTH +ADS   K LNL APSPAMNFDPNQSNKRGVKKGSDPIHNRS
Subjt:  MGFLFNRKGLMFVFIVAGFLLCLL--QPQ-TATGLSTIDVALKWVAYKSP-IINTHNRADS--VKKLNL-APSPAMNFDPNQSNKRGVKKGSDPIHNRS

PQQ10203.1 hypothetical protein Pyn_16404 [Prunus yedoensis var. nudiflora]1.1e-1148.98Show/hide
Query:  MGFLFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPIINTHNRADSV------KKLNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        MGFL  R  ++FV I  GFL   LQP+  +GL ++D+AL+W       + + +  ++V       KL+LAP+P+M FDPNQSNKR V+KGSDPIHNRS
Subjt:  MGFLFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPIINTHNRADSV------KKLNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

QHN98326.1 uncharacterized protein DS421_13g388610 [Arachis hypogaea]4.2e-1149.44Show/hide
Query:  LFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPIINTHNRADSVKKLNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        L+  +G   +  V G L    QP   +GL + D+ALKW   +S I+      D   KL++AP+P+M FDPNQSNKR VKKGSDPIHNRS
Subjt:  LFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPIINTHNRADSVKKLNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

TrEMBL top hitse value%identityAlignment
A0A0A0LPD5 Uncharacterized protein1.4e-2577.78Show/hide
Query:  MGFLFNRKGLMFVFIVAGFLLCLL--QPQ-TATGLSTIDVALKWVAYKSP-IINTHNRADS--VKKLNL-APSPAMNFDPNQSNKRGVKKGSDPIHNRS
        MG LF+RKGL FVF+VA FLLC+L  QPQ TA GLSTID ALKWVA+KS   INTH +ADS   K LNL APSPAMNFDPNQSNKRGVKKGSDPIHNRS
Subjt:  MGFLFNRKGLMFVFIVAGFLLCLL--QPQ-TATGLSTIDVALKWVAYKSP-IINTHNRADS--VKKLNL-APSPAMNFDPNQSNKRGVKKGSDPIHNRS

A0A2P5F704 CLAVATA3/ESR-RELATED2.6e-1147.42Show/hide
Query:  MGFLFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPII-NTH-----NRADSVKKLNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR
        MG L NR  L+ + +  GFL  L  P+  + L + D+ALKW   K P + N H        D  +KL+LAP+P++ FDPNQSNKR V++GSDPIHNR
Subjt:  MGFLFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPII-NTH-----NRADSVKKLNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR

A0A314YU30 Uncharacterized protein5.3e-1248.98Show/hide
Query:  MGFLFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPIINTHNRADSV------KKLNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        MGFL  R  ++FV I  GFL   LQP+  +GL ++D+AL+W       + + +  ++V       KL+LAP+P+M FDPNQSNKR V+KGSDPIHNRS
Subjt:  MGFLFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPIINTHNRADSV------KKLNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

A0A445ABG3 Uncharacterized protein2.0e-1149.44Show/hide
Query:  LFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPIINTHNRADSVKKLNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        L+  +G   +  V G L    QP   +GL + D+ALKW   +S I+      D   KL++AP+P+M FDPNQSNKR VKKGSDPIHNRS
Subjt:  LFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPIINTHNRADSVKKLNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

M5WYZ5 Uncharacterized protein3.4e-1148.45Show/hide
Query:  MGFLFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPIINTHNRADSV------KKLNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR
        MGFL  R  ++FV I  GFL   LQP+  +GL ++D+AL+W       + + +   +V       KL+LAP+P+M FDPNQSNKR V+KGSDPIHNR
Subjt:  MGFLFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPIINTHNRADSV------KKLNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCTTGTTTAACAGGAAAGGTTTGATGTTTGTGTTTATTGTAGCTGGTTTTTTGTTGTGTCTTCTTCAACCTCAAACAGCAACTGGGCTTAGCACAATTGATGT
TGCTCTCAAATGGGTGGCTTACAAATCCCCAATTATCAACACCCACAACAGGGCTGATTCAGTGAAAAAATTGAACTTGGCTCCATCACCAGCAATGAATTTTGACCCAA
ATCAATCCAACAAAAGAGGAGTCAAGAAAGGATCTGACCCAATTCACAACAGATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCTTGTTTAACAGGAAAGGTTTGATGTTTGTGTTTATTGTAGCTGGTTTTTTGTTGTGTCTTCTTCAACCTCAAACAGCAACTGGGCTTAGCACAATTGATGT
TGCTCTCAAATGGGTGGCTTACAAATCCCCAATTATCAACACCCACAACAGGGCTGATTCAGTGAAAAAATTGAACTTGGCTCCATCACCAGCAATGAATTTTGACCCAA
ATCAATCCAACAAAAGAGGAGTCAAGAAAGGATCTGACCCAATTCACAACAGATCTTAG
Protein sequenceShow/hide protein sequence
MGFLFNRKGLMFVFIVAGFLLCLLQPQTATGLSTIDVALKWVAYKSPIINTHNRADSVKKLNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS