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HG10008619 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008619
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box domain-containing protein
Genome locationChr10:24625922..24626766
RNA-Seq ExpressionHG10008619
SyntenyHG10008619
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039746.1 F-box protein [Cucumis melo var. makuwa]1.4e-2765.56Show/hide
Query:  IQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSNILMGHE
        IQVWRM EKDLWI+EF+I+DIPN+W    L+K FEDGEIL M+N+DFFC+YN  TGRKK++  NQKK R +C+I+ LNFG L NIL G E
Subjt:  IQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSNILMGHE

KAA0039747.1 F-box protein [Cucumis melo var. makuwa]8.0e-2859.81Show/hide
Query:  FLTRKNHNGCFDVWWTIQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSN
        F+  K +N       +IQVWRM EKDLWIREF+I DIP +W    L+K FEDGEIL M+N+DFFC+YN  TGRKK++  NQKK R++CQI+ LNFG L N
Subjt:  FLTRKNHNGCFDVWWTIQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSN

Query:  ILMGHET
        IL G ET
Subjt:  ILMGHET

TYK24751.1 F-box protein [Cucumis melo var. makuwa]1.0e-2764.84Show/hide
Query:  IQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSNILMGHET
        IQVWRM EKDLWI+EF+I+DIPN+W    L+K FEDGEIL M+N+DFFC+YN  TGRKK++  NQKK R +C+I+ LNFG L NIL G E+
Subjt:  IQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSNILMGHET

XP_008460183.1 PREDICTED: uncharacterized protein LOC103499068 [Cucumis melo]2.8e-1750.47Show/hide
Query:  FLTRKNHNGCFDVWWTIQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSN
        F+  K +N       +IQVWRM EKDLWIREF+I DIP +W    L+K FEDGEIL                RKK++  NQKK R++CQI+ LNFG L N
Subjt:  FLTRKNHNGCFDVWWTIQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSN

Query:  ILMGHET
        IL G ET
Subjt:  ILMGHET

XP_038890298.1 F-box protein At3g07870-like [Benincasa hispida]1.1e-2969.66Show/hide
Query:  TIQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSNILMG
        +IQVWRM EKDLWIREF+++DIPNDW    L+K FEDGEIL M+N DFFC+YNP+TGRKK+I  N+KK+R +CQI SLNFG L NIL G
Subjt:  TIQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSNILMG

TrEMBL top hitse value%identityAlignment
A0A0A0LPC6 Uncharacterized protein4.1e-2258.43Show/hide
Query:  TIQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSNILMG
        TIQVW M EK  WIR+F+I DI  +W   +L+K FEDGEIL +++ DFFCFY+P+T +K++I  NQKK R +CQI+ LNFGSL  IL G
Subjt:  TIQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSNILMG

A0A0A0LWG1 F-box domain-containing protein8.0e-2665.17Show/hide
Query:  TIQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSNILMG
        TIQVWRM EKD W+R+F+I DI  +WI  +L+K FED EIL M+NMDFFCFYNP + +K++I  NQKK R ICQI+SLNFG LS IL G
Subjt:  TIQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSNILMG

A0A5A7TCF3 F-box protein6.6e-2865.56Show/hide
Query:  IQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSNILMGHE
        IQVWRM EKDLWI+EF+I+DIPN+W    L+K FEDGEIL M+N+DFFC+YN  TGRKK++  NQKK R +C+I+ LNFG L NIL G E
Subjt:  IQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSNILMGHE

A0A5A7TE00 F-box protein3.9e-2859.81Show/hide
Query:  FLTRKNHNGCFDVWWTIQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSN
        F+  K +N       +IQVWRM EKDLWIREF+I DIP +W    L+K FEDGEIL M+N+DFFC+YN  TGRKK++  NQKK R++CQI+ LNFG L N
Subjt:  FLTRKNHNGCFDVWWTIQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSN

Query:  ILMGHET
        IL G ET
Subjt:  ILMGHET

A0A5D3DMB7 F-box protein5.0e-2864.84Show/hide
Query:  IQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSNILMGHET
        IQVWRM EKDLWI+EF+I+DIPN+W    L+K FEDGEIL M+N+DFFC+YN  TGRKK++  NQKK R +C+I+ LNFG L NIL G E+
Subjt:  IQVWRMIEKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSNILMGHET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCCTACTATGCATCTCTGATCGAGTCCCCAATTGCGAATTTACTGGTTTACGTAATCCCAAGATGCATTGTATCAATCTTTGATACTAGGAAATATTTGGATGT
TGATGTTGATGTTGATTTTGATTTGGACTTGGAATTGGAATGTATTAAATCTGCCTCATTACGGTTTGACGGTGATTGGTCCTTCATCTCAATCAACAATCAATGTAATT
TGGTTTTAGCCCTACCTCGAAAAAATACAAATTATTCAGAGTTTTTGACTCGGAAGAATCATAATGGATGTTTTGACGTTTGGTGGACTATTCAAGTGTGGAGGATGATC
GAGAAAGATTTATGGATAAGGGAATTTATTATTAATGACATACCAAATGATTGGATCTTCCCGAAACTCGTCAAAACTTTTGAAGATGGAGAGATATTGTTAATGATGAA
TATGGACTTTTTTTGCTTCTACAATCCTGTCACTGGGAGGAAAAAGATGATCCATAATAATCAAAAGAAGTTGAGACAAATTTGTCAAATAGACTCTTTGAATTTTGGTT
CTCTCTCAAATATTTTGATGGGACACGAGACAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTCCTACTATGCATCTCTGATCGAGTCCCCAATTGCGAATTTACTGGTTTACGTAATCCCAAGATGCATTGTATCAATCTTTGATACTAGGAAATATTTGGATGT
TGATGTTGATGTTGATTTTGATTTGGACTTGGAATTGGAATGTATTAAATCTGCCTCATTACGGTTTGACGGTGATTGGTCCTTCATCTCAATCAACAATCAATGTAATT
TGGTTTTAGCCCTACCTCGAAAAAATACAAATTATTCAGAGTTTTTGACTCGGAAGAATCATAATGGATGTTTTGACGTTTGGTGGACTATTCAAGTGTGGAGGATGATC
GAGAAAGATTTATGGATAAGGGAATTTATTATTAATGACATACCAAATGATTGGATCTTCCCGAAACTCGTCAAAACTTTTGAAGATGGAGAGATATTGTTAATGATGAA
TATGGACTTTTTTTGCTTCTACAATCCTGTCACTGGGAGGAAAAAGATGATCCATAATAATCAAAAGAAGTTGAGACAAATTTGTCAAATAGACTCTTTGAATTTTGGTT
CTCTCTCAAATATTTTGATGGGACACGAGACAACCTGA
Protein sequenceShow/hide protein sequence
MLSYYASLIESPIANLLVYVIPRCIVSIFDTRKYLDVDVDVDFDLDLELECIKSASLRFDGDWSFISINNQCNLVLALPRKNTNYSEFLTRKNHNGCFDVWWTIQVWRMI
EKDLWIREFIINDIPNDWIFPKLVKTFEDGEILLMMNMDFFCFYNPVTGRKKMIHNNQKKLRQICQIDSLNFGSLSNILMGHETT