; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008638 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008638
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING-type domain-containing protein
Genome locationChr10:24780130..24783139
RNA-Seq ExpressionHG10008638
SyntenyHG10008638
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR039515 - NOT4, modified RING finger, HC subclass (C4C4-type)
IPR039780 - CCR4-NOT transcription complex subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057903.1 suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]9.7e-17294.12Show/hide
Query:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG
        VRNSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREIGEENDRSVHHHSD+SDSPSNSPPSLGSSILGGNDSGPHFTG
Subjt:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG

Query:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC
        SSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQ D+CSESSPRGNVVSQLDSCGD RNELGVGDGDS+VERGRI QRAS+NC
Subjt:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC

Query:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD
        RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD
Subjt:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD

Query:  NETNVHGGSPTFPLARSCSMISR
        NETN+  GSPT PLARSCSMISR
Subjt:  NETNVHGGSPTFPLARSCSMISR

TYJ98591.1 suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]3.7e-17194.1Show/hide
Query:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG
        VRNSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREIGEENDRSVHHHSD+SDSPSNSPPSLGSSILGGNDSGPHFTG
Subjt:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG

Query:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC
        SSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQ D+CSESSPRGNVVSQLDSCGD RNELGVGDGDS+VERGRI QRAS+NC
Subjt:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC

Query:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD
        RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD
Subjt:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD

Query:  NETNVHGGSPTFPLARSCSMIS
        NETN+  GSPT PLARSCSMIS
Subjt:  NETNVHGGSPTFPLARSCSMIS

XP_004138290.2 uncharacterized protein LOC101211244 [Cucumis sativus]1.7e-17193.83Show/hide
Query:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG
        VRNSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTR+DD+LSS+KINMREIGEENDRSVHHHSD+SDSPSNSPPSLGSSILGGNDSGPHFTG
Subjt:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG

Query:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC
        SSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQHD+CSESSPRGNV+SQLDSCGD RNELGVGDGDSSVERGRI QRAS+NC
Subjt:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC

Query:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD
        RAWRPDDAFRPQSLPTLSKQLSLP TDRRFGCGG+ WACGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD
Subjt:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD

Query:  NETNVHGGSPTFPLARSCSMISRS
        NETNV  GSPT PLARSCSMISRS
Subjt:  NETNVHGGSPTFPLARSCSMISRS

XP_008453149.1 PREDICTED: uncharacterized protein LOC103493947 [Cucumis melo]3.4e-17294.14Show/hide
Query:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG
        VRNSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREIGEENDRSVHHHSD+SDSPSNSPPSLGSSILGGNDSGPHFTG
Subjt:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG

Query:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC
        SSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQ D+CSESSPRGNVVSQLDSCGD RNELGVGDGDS+VERGRI QRAS+NC
Subjt:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC

Query:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD
        RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD
Subjt:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD

Query:  NETNVHGGSPTFPLARSCSMISRS
        NETN+  GSPT PLARSCSMISRS
Subjt:  NETNVHGGSPTFPLARSCSMISRS

XP_038878939.1 uncharacterized protein LOC120071026 [Benincasa hispida]3.1e-17093.54Show/hide
Query:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG
        V+NSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMR+IGEENDRSVH HSDFSDSPSNSPPSLGSSILGGNDSGPHFTG
Subjt:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG

Query:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC
        SSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQHD+CSESSPRGNVVSQLDSCGDSRNELGVGDGDS V+RGRI QRAS+NC
Subjt:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC

Query:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGC-GGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPA
        RAWRPDDAFRPQSLP LSKQLSLPNTDRRFGC GGIPW CGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI+EEDGRCPGCRKPYDRDPA
Subjt:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGC-GGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPA

Query:  DNETNVHGGSPTFPLARSCSMISRS
        D+ETNV GGSP F LARSCSMISRS
Subjt:  DNETNVHGGSPTFPLARSCSMISRS

TrEMBL top hitse value%identityAlignment
A0A0A0LP94 RING-type domain-containing protein2.1e-17293.85Show/hide
Query:  MVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFT
        MVRNSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTR+DD+LSS+KINMREIGEENDRSVHHHSD+SDSPSNSPPSLGSSILGGNDSGPHFT
Subjt:  MVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFT

Query:  GSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASIN
        GSSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQHD+CSESSPRGNV+SQLDSCGD RNELGVGDGDSSVERGRI QRAS+N
Subjt:  GSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASIN

Query:  CRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPA
        CRAWRPDDAFRPQSLPTLSKQLSLP TDRRFGCGG+ WACGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPA
Subjt:  CRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPA

Query:  DNETNVHGGSPTFPLARSCSMISRS
        DNETNV  GSPT PLARSCSMISRS
Subjt:  DNETNVHGGSPTFPLARSCSMISRS

A0A1S3BVJ1 uncharacterized protein LOC1034939471.6e-17294.14Show/hide
Query:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG
        VRNSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREIGEENDRSVHHHSD+SDSPSNSPPSLGSSILGGNDSGPHFTG
Subjt:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG

Query:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC
        SSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQ D+CSESSPRGNVVSQLDSCGD RNELGVGDGDS+VERGRI QRAS+NC
Subjt:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC

Query:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD
        RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD
Subjt:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD

Query:  NETNVHGGSPTFPLARSCSMISRS
        NETN+  GSPT PLARSCSMISRS
Subjt:  NETNVHGGSPTFPLARSCSMISRS

A0A5A7UPV5 Suppressor protein SRP40 isoform X24.7e-17294.12Show/hide
Query:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG
        VRNSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREIGEENDRSVHHHSD+SDSPSNSPPSLGSSILGGNDSGPHFTG
Subjt:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG

Query:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC
        SSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQ D+CSESSPRGNVVSQLDSCGD RNELGVGDGDS+VERGRI QRAS+NC
Subjt:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC

Query:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD
        RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD
Subjt:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD

Query:  NETNVHGGSPTFPLARSCSMISR
        NETN+  GSPT PLARSCSMISR
Subjt:  NETNVHGGSPTFPLARSCSMISR

A0A5D3BIS7 Suppressor protein SRP40 isoform X21.8e-17194.1Show/hide
Query:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG
        VRNSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREIGEENDRSVHHHSD+SDSPSNSPPSLGSSILGGNDSGPHFTG
Subjt:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG

Query:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC
        SSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQ D+CSESSPRGNVVSQLDSCGD RNELGVGDGDS+VERGRI QRAS+NC
Subjt:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC

Query:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD
        RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD
Subjt:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD

Query:  NETNVHGGSPTFPLARSCSMIS
        NETN+  GSPT PLARSCSMIS
Subjt:  NETNVHGGSPTFPLARSCSMIS

A0A6J1C357 uncharacterized protein LOC1110070169.9e-16289.51Show/hide
Query:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG
        V+NSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKT +DDNLSSKKINMREIG +N  SVHH SDFS+SPSNSPPSL SSILGGNDSGPHFTG
Subjt:  VRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTG

Query:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC
        SSSSSSCRSSSSGCRSGSIT      EEEGDDD LDDWEAIADALAATDKQHD+CSESSPRG+ VSQLDSCGDSRNELGVGDGDS +E GRIAQRA ++C
Subjt:  SSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINC

Query:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD
        RAWRPDDAFRPQSLPTLSKQLSLPNTDRR+GCGGIPWACGGVM VP SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPY+ DPAD
Subjt:  RAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPAD

Query:  NETNVHGGSPTFPLARSCSMISRS
        +ETNVHGGSPT PLARSCSMISRS
Subjt:  NETNVHGGSPTFPLARSCSMISRS

SwissProt top hitse value%identityAlignment
O95628 CCR4-NOT transcription complex subunit 45.6e-1352.73Show/hide
Query:  PISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA
        P+ CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Subjt:  PISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA

P34909 General negative regulator of transcription subunit 43.4e-1050Show/hide
Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYD
        CP+C E +D+TD +F PC CG+++C FC+  I    E +GRCP CR+ YD
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYD

Q09818 Putative general negative regulator of transcription C16C9.04c9.9e-1048Show/hide
Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDRD
        CP+C E++D++D +F PC CG+R+C FC   I E+ +GRCP CR+ Y  +
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDRD

Q8BT14 CCR4-NOT transcription complex subunit 45.6e-1352.73Show/hide
Query:  PISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA
        P+ CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Subjt:  PISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA

Arabidopsis top hitse value%identityAlignment
AT1G74870.1 RING/U-box superfamily protein1.6e-1529.15Show/hide
Query:  KLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTGSSSS
        KLKQ K+D RR+QW+S+    N    E   RL S++ K  +     + +I+  +  E+++  +   S F+ SP        +S+L   DS          
Subjt:  KLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTGSSSS

Query:  SSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINCRAWR
            S    C S  +TEEEEE      DD  D+W+   DAL + +  ++  S       +V++     D   E      D+S    +  Q A+       
Subjt:  SSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINCRAWR

Query:  PDDAFRPQSLPTL---SKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDR
              P +  T+   S +    N++++ G G               CPIC E +D TD  F PC CGFR+CLFCH +I E + RCP CRK Y +
Subjt:  PDDAFRPQSLPTL---SKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDR

AT3G45630.1 RNA binding (RRM/RBD/RNP motifs) family protein2.4e-1142.86Show/hide
Query:  SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDRD
        +CP+C E++DLTD    PC CG+++C++C   I+      + +GRCP CR PYD++
Subjt:  SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDRD

AT3G48070.1 RING/U-box superfamily protein1.5e-5845.21Show/hide
Query:  RNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIG------EENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSG
        R++KLKQSKL +RREQWLS+  + NK   EE             +  + S+K + R++       +E++   H H  F +S SNSP    +SIL G +S 
Subjt:  RNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIG------EENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSG

Query:  PHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSC---GDSRNELGVGDGDSSVERGRI
        P+F+ SSS     S S G  SG+ITEEE+ +    DD CLDDWEAIADALAA D++H++  E+ P        +SC    D +    +G  D  +   + 
Subjt:  PHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSC---GDSRNELGVGDGDSSVERGRI

Query:  --AQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGC
           +R   + +AWRPDD  RPQ LP L KQ S P  +  F           V  VP SCPIC+EDLDLTDS+FLPC CGFRLCLFCHK I + DGRCPGC
Subjt:  --AQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGC

Query:  RKPYDRDPADNETNVHGGSPTFPLARSCSMISRS
        RKPY+R+    E +V GG  T  LARS SM  RS
Subjt:  RKPYDRDPADNETNVHGGSPTFPLARSCSMISRS

AT3G48070.2 RING/U-box superfamily protein3.5e-5845.05Show/hide
Query:  RNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIG------EENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSG
        R++KLKQSKL +RREQWLS+  + NK   EE             +  + S+K + R++       +E++   H H  F +S SNSP    +SIL G +S 
Subjt:  RNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIG------EENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSG

Query:  PHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSC---GDSRNELGVGDGDSSVERGRI
        P+F+ SSS     S S G  SG+ITEEE+ +    DD CLDDWEAIADALAA D++H++  E+ P        +SC    D +    +G  D  +   + 
Subjt:  PHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSC---GDSRNELGVGDGDSSVERGRI

Query:  --AQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGC
           +R   + +AWRPDD  RPQ LP L KQ S P  +  F           V  VP SCPIC+EDLDLTDS+FLPC CGFRLCLFCHK I + DGRCPGC
Subjt:  --AQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGC

Query:  RKPYDRDPADNETNVHGGSPTFPLARSCSMISR
        RKPY+R+    E +V GG  T  LARS SM  R
Subjt:  RKPYDRDPADNETNVHGGSPTFPLARSCSMISR

AT5G62910.1 RING/U-box superfamily protein5.7e-6146.65Show/hide
Query:  RNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTGS
        +++K+KQ+KL +RREQWLS+  V NK+  EE +     V ++++  + SS K+  RE       ++ HH  F +SPSNS        +GG  S  +F+G 
Subjt:  RNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTGS

Query:  SSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATD--KQHDRCSESSPRGNVVSQLDS--CGDSRNELG--VGDGDSSVERGRIAQR
        SS SS  SSSSG  SG+ITEEE  +++  DD C+DDWEA+ADALAA +  ++  R  ES      V Q  S  C  S ++    VG  D   E  R++ R
Subjt:  SSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATD--KQHDRCSESSPRGNVVSQLDS--CGDSRNELG--VGDGDSSVERGRIAQR

Query:  ASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYD
           + RAWR DD  RPQ LP L+KQLS P  D+RF            + +P SCPIC+EDLDLTDS+FLPC CGFRLCLFCHK I + DGRCPGCRKPY+
Subjt:  ASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYD

Query:  RDPADNETNVHGGSPTFPLARSCSMISR
        R+    ET++ GG  T  LARS SM  +
Subjt:  RDPADNETNVHGGSPTFPLARSCSMISR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAGGAATTCCAAATTGAAGCAGTCTAAGCTTGACGTTCGTCGGGAACAATGGCTTTCTCGAGGTGTTGTAAAGAACAAAAAATGGAACGAAGAAGACAATCGGCT
TGATTCAGTGGTCATTAAAACGAGGGAAGATGATAACCTTTCCTCCAAAAAAATAAATATGAGGGAAATAGGAGAAGAGAACGACAGATCGGTCCACCACCATAGCGATT
TTTCGGACTCACCGTCTAATAGCCCCCCTAGTCTTGGCAGTAGTATCTTGGGTGGAAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGCCGTAGC
AGCTCTAGTGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGAAGAAGAAGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGC
CGCCACTGACAAGCAACATGATCGATGTTCCGAGTCTTCCCCTAGAGGCAATGTTGTTTCTCAATTGGATTCTTGTGGAGACAGCAGAAATGAGTTGGGTGTAGGAGATG
GTGACTCGAGTGTTGAGCGTGGGAGAATTGCGCAGAGGGCTTCGATAAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCGAAG
CAGCTTAGTTTACCGAATACAGACCGTCGTTTTGGATGTGGAGGCATCCCTTGGGCCTGTGGTGGTGTTATGCCTGTGCCTATATCTTGTCCAATTTGCTTTGAAGACTT
GGACCTTACAGACTCAAGTTTTTTACCTTGTTTCTGTGGATTCCGGCTATGCCTTTTCTGTCATAAGAGGATTCTTGAAGAAGATGGGCGCTGTCCTGGCTGCAGGAAGC
CATATGATCGTGATCCTGCCGACAATGAGACAAATGTACATGGTGGCAGCCCAACGTTCCCATTGGCCCGTTCTTGTAGCATGATTTCAAGGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCAGGAATTCCAAATTGAAGCAGTCTAAGCTTGACGTTCGTCGGGAACAATGGCTTTCTCGAGGTGTTGTAAAGAACAAAAAATGGAACGAAGAAGACAATCGGCT
TGATTCAGTGGTCATTAAAACGAGGGAAGATGATAACCTTTCCTCCAAAAAAATAAATATGAGGGAAATAGGAGAAGAGAACGACAGATCGGTCCACCACCATAGCGATT
TTTCGGACTCACCGTCTAATAGCCCCCCTAGTCTTGGCAGTAGTATCTTGGGTGGAAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGCCGTAGC
AGCTCTAGTGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGAAGAAGAAGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGC
CGCCACTGACAAGCAACATGATCGATGTTCCGAGTCTTCCCCTAGAGGCAATGTTGTTTCTCAATTGGATTCTTGTGGAGACAGCAGAAATGAGTTGGGTGTAGGAGATG
GTGACTCGAGTGTTGAGCGTGGGAGAATTGCGCAGAGGGCTTCGATAAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCGAAG
CAGCTTAGTTTACCGAATACAGACCGTCGTTTTGGATGTGGAGGCATCCCTTGGGCCTGTGGTGGTGTTATGCCTGTGCCTATATCTTGTCCAATTTGCTTTGAAGACTT
GGACCTTACAGACTCAAGTTTTTTACCTTGTTTCTGTGGATTCCGGCTATGCCTTTTCTGTCATAAGAGGATTCTTGAAGAAGATGGGCGCTGTCCTGGCTGCAGGAAGC
CATATGATCGTGATCCTGCCGACAATGAGACAAATGTACATGGTGGCAGCCCAACGTTCCCATTGGCCCGTTCTTGTAGCATGATTTCAAGGTCTTAG
Protein sequenceShow/hide protein sequence
MVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRS
SSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSK
QLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS