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HG10008700 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008700
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionG-patch domain-containing protein
Genome locationChr10:25381526..25385333
RNA-Seq ExpressionHG10008700
SyntenyHG10008700
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily
IPR041591 - OCRE domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589431.1 SUPPRESSOR OF ABI3-5, partial [Cucurbita argyrosperma subsp. sororia]3.9e-5163.33Show/hide
Query:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSFEA
        E ET+ GSEELQ+S CSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQ+NE  EECKTYPD+PV GE C QVC +GSEDHSSFEA
Subjt:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSFEA

Query:  SEIDTSKCKEIDGDGLPLEL-EDVAGLGGEN-----WIIGGDFNVTRWSWEKSH----DHSISPSMRAFNKWIADYQLID
        SEIDTS CK   GDGLPLE+ E + G   EN     W+     ++    +  S     + SISP+    N   +D Q+++
Subjt:  SEIDTSKCKEIDGDGLPLEL-EDVAGLGGEN-----WIIGGDFNVTRWSWEKSH----DHSISPSMRAFNKWIADYQLID

KAG6603206.1 hypothetical protein SDJN03_03815, partial [Cucurbita argyrosperma subsp. sororia]3.9e-5163.33Show/hide
Query:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSFEA
        E ET+ GSEELQ+S CSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQ+NE  EECKTYPD+PV GE C QVC +GSEDHSSFEA
Subjt:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSFEA

Query:  SEIDTSKCKEIDGDGLPLEL-EDVAGLGGEN-----WIIGGDFNVTRWSWEKSH----DHSISPSMRAFNKWIADYQLID
        SEIDTS CK   GDGLPLE+ E + G   EN     W+     ++    +  S     + SISP+    N   +D Q+++
Subjt:  SEIDTSKCKEIDGDGLPLEL-EDVAGLGGEN-----WIIGGDFNVTRWSWEKSH----DHSISPSMRAFNKWIADYQLID

XP_022921820.1 uncharacterized protein LOC111429960 isoform X2 [Cucurbita moschata]1.0e-5181.89Show/hide
Query:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFEAS
        E ET+ GSEELQ+S CSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQ+NE EECKTYPD+PV GE C QVC +GSEDHSSFEAS
Subjt:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFEAS

Query:  EIDTSKCKEIDGDGLPLELEDVAGLGG
        EIDTS CK   GDGLPLE+ +  G+GG
Subjt:  EIDTSKCKEIDGDGLPLELEDVAGLGG

XP_022921822.1 SUPPRESSOR OF ABI3-5 isoform X4 [Cucurbita moschata]3.9e-5163.33Show/hide
Query:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSFEA
        E ET+ GSEELQ+S CSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQ+NE  EECKTYPD+PV GE C QVC +GSEDHSSFEA
Subjt:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSFEA

Query:  SEIDTSKCKEIDGDGLPLEL-EDVAGLGGEN-----WIIGGDFNVTRWSWEKSH----DHSISPSMRAFNKWIADYQLID
        SEIDTS CK   GDGLPLE+ E + G   EN     W+     ++    +  S     + SISP+    N   +D Q+++
Subjt:  SEIDTSKCKEIDGDGLPLEL-EDVAGLGGEN-----WIIGGDFNVTRWSWEKSH----DHSISPSMRAFNKWIADYQLID

XP_038878956.1 uncharacterized protein LOC120071038 isoform X2 [Benincasa hispida]1.3e-5186.55Show/hide
Query:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFE
        MEE ET+FGSEELQDS C FVWDENSQLYFHSSSGFYHDP AGWYYSSRDGSYYKFENG YVLLQ NEGEECKTY DNPV G+S SQVCNTGSEDHS FE
Subjt:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFE

Query:  ASEIDTSKCKEIDGDGLPL
        A+EIDTSKCK  D DGLPL
Subjt:  ASEIDTSKCKEIDGDGLPL

TrEMBL top hitse value%identityAlignment
A0A0A0LP33 G-patch domain-containing protein1.0e-4981.4Show/hide
Query:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSF
        MEE ETK GSEELQDSNCSFVWDENSQLYFHSSSGFYHDPV GWYYSSRDGSYYKFENGSYV LQLNE GEECKTYPDNPV GE  SQVC+TGSEDH SF
Subjt:  MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSF

Query:  EASEIDTSKCKEIDGDGLP----LELEDV
        EA+E DT  CK  D DGLP    +E+ DV
Subjt:  EASEIDTSKCKEIDGDGLP----LELEDV

A0A6J1E1H5 SUPPRESSOR OF ABI3-5 isoform X41.9e-5163.33Show/hide
Query:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSFEA
        E ET+ GSEELQ+S CSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQ+NE  EECKTYPD+PV GE C QVC +GSEDHSSFEA
Subjt:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSFEA

Query:  SEIDTSKCKEIDGDGLPLEL-EDVAGLGGEN-----WIIGGDFNVTRWSWEKSH----DHSISPSMRAFNKWIADYQLID
        SEIDTS CK   GDGLPLE+ E + G   EN     W+     ++    +  S     + SISP+    N   +D Q+++
Subjt:  SEIDTSKCKEIDGDGLPLEL-EDVAGLGGEN-----WIIGGDFNVTRWSWEKSH----DHSISPSMRAFNKWIADYQLID

A0A6J1E1M2 uncharacterized protein LOC111429960 isoform X11.2e-5081.25Show/hide
Query:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSFEA
        E ET+ GSEELQ+S CSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQ+NE  EECKTYPD+PV GE C QVC +GSEDHSSFEA
Subjt:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSFEA

Query:  SEIDTSKCKEIDGDGLPLELEDVAGLGG
        SEIDTS CK   GDGLPLE+ +  G+GG
Subjt:  SEIDTSKCKEIDGDGLPLELEDVAGLGG

A0A6J1E2F3 uncharacterized protein LOC111429960 isoform X36.6e-4980.47Show/hide
Query:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSFEA
        E ET+ GSEELQ+S CSFVWDENSQLYFH SSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQ+NE  EECKTYPD+PV GE C QVC +GSEDHSSFEA
Subjt:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE-GEECKTYPDNPVNGESCSQVCNTGSEDHSSFEA

Query:  SEIDTSKCKEIDGDGLPLELEDVAGLGG
        SEIDTS CK   GDGLPLE+ +  G+GG
Subjt:  SEIDTSKCKEIDGDGLPLELEDVAGLGG

A0A6J1E6V8 uncharacterized protein LOC111429960 isoform X24.9e-5281.89Show/hide
Query:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFEAS
        E ET+ GSEELQ+S CSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQ+NE EECKTYPD+PV GE C QVC +GSEDHSSFEAS
Subjt:  EGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFEAS

Query:  EIDTSKCKEIDGDGLPLELEDVAGLGG
        EIDTS CK   GDGLPLE+ +  G+GG
Subjt:  EIDTSKCKEIDGDGLPLELEDVAGLGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G54230.1 suppressor of abi3-51.3e-0431.94Show/hide
Query:  FVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLL----QLNEGEECKTYPDNPVNGESCSQ
        +VWDE S  Y+ ++SG+Y+D  +G YY S  G +Y ++  +   +    Q NE +  +  PD+    +S  Q
Subjt:  FVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLL----QLNEGEECKTYPDNPVNGESCSQ

AT3G54230.2 suppressor of abi3-51.3e-0431.94Show/hide
Query:  FVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLL----QLNEGEECKTYPDNPVNGESCSQ
        +VWDE S  Y+ ++SG+Y+D  +G YY S  G +Y ++  +   +    Q NE +  +  PD+    +S  Q
Subjt:  FVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLL----QLNEGEECKTYPDNPVNGESCSQ

AT4G34140.1 D111/G-patch domain-containing protein3.6e-1561.67Show/hide
Query:  EELQD--SNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE
        +ELQ+     S+VWD ++QLY H SSGFYHDP AGWYY S+DG YYK ENG YV L+ +E
Subjt:  EELQD--SNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE

AT4G34140.2 D111/G-patch domain-containing protein3.6e-1561.67Show/hide
Query:  EELQD--SNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE
        +ELQ+     S+VWD ++QLY H SSGFYHDP AGWYY S+DG YYK ENG YV L+ +E
Subjt:  EELQD--SNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE

AT4G34140.3 D111/G-patch domain-containing protein3.6e-1561.67Show/hide
Query:  EELQD--SNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE
        +ELQ+     S+VWD ++QLY H SSGFYHDP AGWYY S+DG YYK ENG YV L+ +E
Subjt:  EELQD--SNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGGGCGAGACAAAGTTCGGTTCCGAGGAATTGCAGGACAGTAATTGCTCGTTCGTTTGGGATGAGAATTCTCAGCTGTACTTCCATTCCAGTAGTGGATTTTA
TCACGATCCTGTTGCCGGTTGGTATTATAGCAGTCGAGATGGTTCTTATTACAAATTCGAAAATGGAAGCTATGTGCTTCTTCAGTTGAACGAGGGTGAAGAATGTAAGA
CGTATCCTGATAATCCTGTTAACGGCGAATCATGTAGTCAAGTGTGTAATACTGGCAGCGAGGATCACTCTTCATTTGAGGCCAGTGAAATTGATACTTCTAAATGCAAA
GAAATTGATGGTGACGGACTACCATTAGAACTTGAGGATGTAGCTGGATTAGGTGGAGAAAATTGGATCATTGGGGGAGACTTCAATGTTACTCGGTGGTCATGGGAGAA
ATCTCATGATCATTCTATTTCTCCCAGCATGCGGGCTTTTAATAAGTGGATTGCAGACTATCAGTTGATTGATTTTCCCTTGAGCAATGGTACATTTACATGGTCTAGCC
TGGGTGCCACATGTCACGGTCATGCTTGTCCAGGGCGTGTTGCCTATGGCCGCATTACCGTTCCGAACCCTATGTCATTTCATATTATGTATTTCATTATGTTTGTTTAC
CGCTTTCCTTTGTCGCTTTCCTTTACTTTTCATTTCTCGCGACGGCGTAGCACTTTGTACGTGCAACCATGCCACTCTTGTAAAAGCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGGGCGAGACAAAGTTCGGTTCCGAGGAATTGCAGGACAGTAATTGCTCGTTCGTTTGGGATGAGAATTCTCAGCTGTACTTCCATTCCAGTAGTGGATTTTA
TCACGATCCTGTTGCCGGTTGGTATTATAGCAGTCGAGATGGTTCTTATTACAAATTCGAAAATGGAAGCTATGTGCTTCTTCAGTTGAACGAGGGTGAAGAATGTAAGA
CGTATCCTGATAATCCTGTTAACGGCGAATCATGTAGTCAAGTGTGTAATACTGGCAGCGAGGATCACTCTTCATTTGAGGCCAGTGAAATTGATACTTCTAAATGCAAA
GAAATTGATGGTGACGGACTACCATTAGAACTTGAGGATGTAGCTGGATTAGGTGGAGAAAATTGGATCATTGGGGGAGACTTCAATGTTACTCGGTGGTCATGGGAGAA
ATCTCATGATCATTCTATTTCTCCCAGCATGCGGGCTTTTAATAAGTGGATTGCAGACTATCAGTTGATTGATTTTCCCTTGAGCAATGGTACATTTACATGGTCTAGCC
TGGGTGCCACATGTCACGGTCATGCTTGTCCAGGGCGTGTTGCCTATGGCCGCATTACCGTTCCGAACCCTATGTCATTTCATATTATGTATTTCATTATGTTTGTTTAC
CGCTTTCCTTTGTCGCTTTCCTTTACTTTTCATTTCTCGCGACGGCGTAGCACTTTGTACGTGCAACCATGCCACTCTTGTAAAAGCTTATAA
Protein sequenceShow/hide protein sequence
MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFEASEIDTSKCK
EIDGDGLPLELEDVAGLGGENWIIGGDFNVTRWSWEKSHDHSISPSMRAFNKWIADYQLIDFPLSNGTFTWSSLGATCHGHACPGRVAYGRITVPNPMSFHIMYFIMFVY
RFPLSLSFTFHFSRRRSTLYVQPCHSCKSL