CuGenDBv2

Gene ID	HG10008702
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Golgin subfamily A member 6-like protein 2
Genome location	Chr10:25415141..25417142
RNA-Seq Expression	HG10008702
Synteny	HG10008702
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0057829.1 golgin subfamily A member 6-like protein 2 [Cucumis melo var. makuwa]

3.2e-102

91.67

Show/hide

Query:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME
        MGVCSSKDGS+I  DDVKGLKEKIRLLREEVR V++EMDKETKAHEKDMVVFAFKEA WKTEKKRL+EEVKMLRKKVKES TEIEEGNFGEK ATEWEME
Subjt:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME

Query:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI
        GTPN+IFEQIQQERARRDEA+EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERTEALKT+LQAKEETIK+LKEQVVSMEQ+KYKRNREIDILRQSLRI
Subjt:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI

Query:  MTSKKEQQIEPFHKCV
        MTSKKEQQIE  HKCV
Subjt:  MTSKKEQQIEPFHKCV

XP_004138095.1 uncharacterized protein LOC101204691 [Cucumis sativus]

7.0e-105

93.98

Show/hide

Query:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME
        MGVCSSKDGS+I  DDVKGLKEKIRLLREEVRGV+ EMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKES TEIEEGNFGEK ATEWEME
Subjt:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME

Query:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI
        GTPN+IFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGL+WG TERTEALKT+LQAKEETIKALKEQVVSMEQ+KYKRNREIDILRQSLRI
Subjt:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI

Query:  MTSKKEQQIEPFHKCV
        MTSKKEQQIE FHKCV
Subjt:  MTSKKEQQIEPFHKCV

XP_008464528.1 PREDICTED: uncharacterized protein LOC103502383 [Cucumis melo]

3.8e-103

92.13

Show/hide

Query:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME
        MGVCSSKDGS+I  DDVKGLKEKIRLLREEVRGV++EMDKETKAHEKDMVVFAFKEA WKTEKKRL+EEVKMLRKKVKES TEIEEGNFGEK ATEWEME
Subjt:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME

Query:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI
        GTPN+IFEQIQQERARRDEA+EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERTEALKT+LQAKEETIK+LKEQVVSMEQ+KYKRNREIDILRQSLRI
Subjt:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI

Query:  MTSKKEQQIEPFHKCV
        MTSKKEQQIE  HKCV
Subjt:  MTSKKEQQIEPFHKCV

XP_023530768.1 uncharacterized protein LOC111793218 [Cucurbita pepo subsp. pepo]

2.0e-99

89.35

Show/hide

Query:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME
        MGVCSSK GS+IC+DDV GLKEKIRLLREEVRGVMSEMDKE KAHEKDMV+FAFKEA WKTEKK+L+EEVKMLRKKVKE +TEIEEGNFGEKTATEWE+E
Subjt:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME

Query:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI
         TPN+IFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGA ERTEAL+TEL AKEETIKALKEQV SMEQEKYKR+ EIDILRQSLRI
Subjt:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI

Query:  MTSKKEQQIEPFHKCV
        MTSKKE+QIE FH CV
Subjt:  MTSKKEQQIEPFHKCV

XP_038879675.1 uncharacterized protein LOC120071454 [Benincasa hispida]

7.5e-107

95.37

Show/hide

Query:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME
        MGVCSSKDGS+I ED+VKGLKEKIRLLREEVRGVMS MDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEK ATEWEME
Subjt:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME

Query:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI
        GTPN+IFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGL+WGA+ERTEALKTEL+AKEETIKALKE+VVSMEQEKYKRNREIDILRQSLRI
Subjt:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI

Query:  MTSKKEQQIEPFHKCV
        MTSKKEQQIEPFHKCV
Subjt:  MTSKKEQQIEPFHKCV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LS07 Uncharacterized protein

3.4e-105

93.98

Show/hide

Query:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME
        MGVCSSKDGS+I  DDVKGLKEKIRLLREEVRGV+ EMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKES TEIEEGNFGEK ATEWEME
Subjt:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME

Query:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI
        GTPN+IFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGL+WG TERTEALKT+LQAKEETIKALKEQVVSMEQ+KYKRNREIDILRQSLRI
Subjt:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI

Query:  MTSKKEQQIEPFHKCV
        MTSKKEQQIE FHKCV
Subjt:  MTSKKEQQIEPFHKCV

A0A1S3CLU2 uncharacterized protein LOC103502383

1.9e-103

92.13

Show/hide

Query:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME
        MGVCSSKDGS+I  DDVKGLKEKIRLLREEVRGV++EMDKETKAHEKDMVVFAFKEA WKTEKKRL+EEVKMLRKKVKES TEIEEGNFGEK ATEWEME
Subjt:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME

Query:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI
        GTPN+IFEQIQQERARRDEA+EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERTEALKT+LQAKEETIK+LKEQVVSMEQ+KYKRNREIDILRQSLRI
Subjt:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI

Query:  MTSKKEQQIEPFHKCV
        MTSKKEQQIE  HKCV
Subjt:  MTSKKEQQIEPFHKCV

A0A5A7UW79 Golgin subfamily A member 6-like protein 2

1.6e-102

91.67

Show/hide

Query:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME
        MGVCSSKDGS+I  DDVKGLKEKIRLLREEVR V++EMDKETKAHEKDMVVFAFKEA WKTEKKRL+EEVKMLRKKVKES TEIEEGNFGEK ATEWEME
Subjt:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME

Query:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI
        GTPN+IFEQIQQERARRDEA+EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERTEALKT+LQAKEETIK+LKEQVVSMEQ+KYKRNREIDILRQSLRI
Subjt:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI

Query:  MTSKKEQQIEPFHKCV
        MTSKKEQQIE  HKCV
Subjt:  MTSKKEQQIEPFHKCV

A0A5D3BGY2 Golgin subfamily A member 6-like protein 2

1.9e-103

92.13

Show/hide

Query:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME
        MGVCSSKDGS+I  DDVKGLKEKIRLLREEVRGV++EMDKETKAHEKDMVVFAFKEA WKTEKKRL+EEVKMLRKKVKES TEIEEGNFGEK ATEWEME
Subjt:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME

Query:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI
        GTPN+IFEQIQQERARRDEA+EKWKQLYHAIKIELDDLIQRTHNGDGL+WGATERTEALKT+LQAKEETIK+LKEQVVSMEQ+KYKRNREIDILRQSLRI
Subjt:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI

Query:  MTSKKEQQIEPFHKCV
        MTSKKEQQIE  HKCV
Subjt:  MTSKKEQQIEPFHKCV

A0A6J1EVL0 uncharacterized protein LOC111438196

2.8e-99

88.89

Show/hide

Query:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME
        MGVCSSK GS+IC+DDV GLKEKIRLLREEVRGVMSEMD+E KAHEKDMV+FAFKEA WKTEKK+L+EEVKMLRKKVKE +TEIEEGNFGEKTATEWE+E
Subjt:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEME

Query:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI
         TPN+IFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGA ERTEAL+TEL AKEETIKALKEQV SMEQEKYKR+ EIDILRQSLRI
Subjt:  GTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRI

Query:  MTSKKEQQIEPFHKCV
        MTSKKE QIE FH CV
Subjt:  MTSKKEQQIEPFHKCV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G23930.1 unknown protein

2.6e-25

41.15

Show/hide

Query:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEA--GWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWE
        MG C+SK        + +G++      +++ RG    + KE    EK M +   KEA   W+ E+K+L+EEV+ LRKK++E     EE     KT T  E
Subjt:  MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEA--GWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWE

Query:  MEGTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDG-------LYWGATERTEA-----LKTELQAKEETIKALKEQVVSMEQEKYK
         E     + E++  ERA RDEA+EKWKQLY AIK ELD LI  T +  G       L     E TEA     L+ E++ KEET++ L+EQ+V M+++KY+
Subjt:  MEGTPNSIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDG-------LYWGATERTEA-----LKTELQAKEETIKALKEQVVSMEQEKYK

Query:  RNREIDILRQSLRIMTSKKEQQIEPF
        + REID+LRQSLRI+ SKK+++   F
Subjt:  RNREIDILRQSLRIMTSKKEQQIEPF

AT4G13540.1 unknown protein

1.6e-22

39.7

Show/hide

Query:  GSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFK--EAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSI
        G    +D+    K +I++   E R      +   +  EK+ V+ A K  E  W+ E+KRL+EEVK LR+K++E     EEG   +    EWE       +
Subjt:  GSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFK--EAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSI

Query:  FEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATER----TEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRIM
         EQ+  ERA R+EA+E+WKQLY AIK ELDDLI  T+ G+ L     E      + L+ E++A+ ETI+ LK ++  ME+++  + REID+LRQSLRI+
Subjt:  FEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATER----TEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRIM

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTGTATGCTCAAGCAAAGATGGGAGTGATATTTGTGAAGATGATGTTAAAGGATTGAAAGAAAAGATAAGGCTGCTTAGAGAGGAAGTGAGGGGAGTAATGTCTGA
GATGGATAAAGAGACTAAAGCCCATGAGAAAGATATGGTGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAAAAGAGGCTCAAAGAGGAGGTTAAGATGTTGA
GGAAGAAGGTAAAAGAGAGTATTACAGAGATTGAAGAAGGAAATTTTGGAGAAAAGACTGCAACAGAATGGGAAATGGAGGGAACTCCAAATTCAATCTTTGAGCAGATA
CAACAAGAAAGAGCGCGAAGAGATGAAGCCATTGAGAAGTGGAAGCAACTTTATCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGG
ATTATACTGGGGAGCGACTGAGAGGACAGAAGCACTAAAAACAGAACTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAGGTAGTTTCAATGGAGCAAGAAA
AATATAAGAGGAACAGAGAAATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAGCAGATAGAACCTTTCCATAAATGCGTCTTTGTAAATGTG
TCCAGGAAGGTTGTTACCTTTGCCCATTTCAACCCAAATGTTATTCTCATTATCATTTTGTTGGCATGGTCCAAAAGAGGTAAAATGATGGAACAATCAAACCAAGCTCT
CGGAAATCCAAGGGATCCATTACGTATTTCATCGACTAACGTAGCATTGACTAGAAGCAACGAACTGAAATCGCTACAATCGATGCCTGGAACTGGATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGVCSSKDGSDICEDDVKGLKEKIRLLREEVRGVMSEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESITEIEEGNFGEKTATEWEMEGTPNSIFEQI
QQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTEALKTELQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRIMTSKKEQQIEPFHKCVFVNV
SRKVVTFAHFNPNVILIIILLAWSKRGKMMEQSNQALGNPRDPLRISSTNVALTRSNELKSLQSMPGTG

HG10008702 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome