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HG10008717 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008717
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionMyelin transcription factor 1-like protein
Genome locationChr10:25532954..25533337
RNA-Seq ExpressionHG10008717
SyntenyHG10008717
Gene Ontology termsGO:0070125 - mitochondrial translational elongation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003746 - translation elongation factor activity (molecular function)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057816.1 hypothetical protein E6C27_scaffold274G001000 [Cucumis melo var. makuwa]1.6e-4891.94Show/hide
Query:  MSTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGL
        M TP TATATSAIFVLLSGLC+VVFNSDNLMGRWLPI+GLLAVAGVA++AARATMVAWITVLVLLAFAGNRRRVLVK GRKITADVAMYLA+VMVKERGL
Subjt:  MSTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGL

Query:  LAVAFAAVFSFVAVVRSTEIDLLS
        LAVAFAA+FSFVAV RSTEIDLLS
Subjt:  LAVAFAAVFSFVAVVRSTEIDLLS

KAG7021425.1 hypothetical protein SDJN02_15150, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-3982.03Show/hide
Query:  MSTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERG
        MSTP T A   S IF+LLSG C VV N D LMGRW+PIVGLL VAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGR+ITADVAMYL AV+VKERG
Subjt:  MSTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERG

Query:  LLAVAFAAVFSFVAVVRSTEIDLLSFSV
        L+AVAFAAV SF AVVRS EID LS SV
Subjt:  LLAVAFAAVFSFVAVVRSTEIDLLSFSV

KGN63537.2 hypothetical protein Csa_013462 [Cucumis sativus]1.2e-4587.9Show/hide
Query:  MSTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGL
        M TP  ATATSAIFVLLSGLCF+VFNSDNLMGRWLPI+GLLAVA V ++AARATMVAWITVLVLLAFAGNRRRVLVK GRKITADVAMYLA+V+VKERGL
Subjt:  MSTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGL

Query:  LAVAFAAVFSFVAVVRSTEIDLLS
        LAVAFAA+FSF+AV+RSTEIDLLS
Subjt:  LAVAFAAVFSFVAVVRSTEIDLLS

XP_023004957.1 uncharacterized protein LOC111498104 [Cucurbita maxima]5.9e-4083.59Show/hide
Query:  MSTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERG
        MSTPAT A   S IF+LLSG C VV N D LMGRW+PIVGLL VAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGR+ITADVAMYL+AV+VKERG
Subjt:  MSTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERG

Query:  LLAVAFAAVFSFVAVVRSTEIDLLSFSV
        L+AVAFAAV SFVAVVRS EID LS SV
Subjt:  LLAVAFAAVFSFVAVVRSTEIDLLSFSV

XP_023530771.1 uncharacterized protein LOC111793221 [Cucurbita pepo subsp. pepo]2.2e-3982.81Show/hide
Query:  MSTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERG
        MSTP T A   S IF+LLSG C VV N D LMGRW+PIVGLL VAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGR+ITADVAMYL AV+VKERG
Subjt:  MSTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERG

Query:  LLAVAFAAVFSFVAVVRSTEIDLLSFSV
        L+AVAFAAV SFVAVVRS EID LS SV
Subjt:  LLAVAFAAVFSFVAVVRSTEIDLLSFSV

TrEMBL top hitse value%identityAlignment
A0A0A0LNT4 Uncharacterized protein1.9e-4489.83Show/hide
Query:  ATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGLLAVAFA
        ATATSAIFVLLSGLCF+VFNSDNLMGRWLPI+GLLAVA V ++AARATMVAWITVLVLLAFAGNRRRVLVK GRKITADVAMYLA+V+VKERGLLAVAFA
Subjt:  ATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGLLAVAFA

Query:  AVFSFVAVVRSTEIDLLS
        A+FSF+AV+RSTEIDLLS
Subjt:  AVFSFVAVVRSTEIDLLS

A0A0A0LRZ2 Uncharacterized protein4.6e-4688.71Show/hide
Query:  MSTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGL
        M TP TATATSAIFVLLSGLCF+VFNSDNLMGRWLPI+GLLAVA VA++AARATMVAWITVLVLLAFAGNRRRVLVK GRKITADVAMYLA+V+VKERGL
Subjt:  MSTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGL

Query:  LAVAFAAVFSFVAVVRSTEIDLLS
        LAVAFAA+FSF+AV+RSTEI LLS
Subjt:  LAVAFAAVFSFVAVVRSTEIDLLS

A0A5D3BFC5 Uncharacterized protein7.5e-4991.94Show/hide
Query:  MSTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGL
        M TP TATATSAIFVLLSGLC+VVFNSDNLMGRWLPI+GLLAVAGVA++AARATMVAWITVLVLLAFAGNRRRVLVK GRKITADVAMYLA+VMVKERGL
Subjt:  MSTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGL

Query:  LAVAFAAVFSFVAVVRSTEIDLLS
        LAVAFAA+FSFVAV RSTEIDLLS
Subjt:  LAVAFAAVFSFVAVVRSTEIDLLS

A0A6J1F5J3 uncharacterized protein LOC1114410291.6e-3881.25Show/hide
Query:  MSTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERG
        MSTP T A   S IF+LLSG C VV N D LMGRW+PIVGLL VAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGR+ITADVAMYL AV+VKERG
Subjt:  MSTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERG

Query:  LLAVAFAAVFSFVAVVRSTEIDLLSFSV
        L+AV FAAV S VAVVRS EID LS SV
Subjt:  LLAVAFAAVFSFVAVVRSTEIDLLSFSV

A0A6J1KRU7 uncharacterized protein LOC1114981042.9e-4083.59Show/hide
Query:  MSTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERG
        MSTPAT A   S IF+LLSG C VV N D LMGRW+PIVGLL VAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGR+ITADVAMYL+AV+VKERG
Subjt:  MSTPAT-ATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERG

Query:  LLAVAFAAVFSFVAVVRSTEIDLLSFSV
        L+AVAFAAV SFVAVVRS EID LS SV
Subjt:  LLAVAFAAVFSFVAVVRSTEIDLLSFSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G03730.1 unknown protein2.0e-0641.03Show/hide
Query:  IVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGLLAVAFAAVFSFVAV
        + G +++   A VA  A MV WI+V+VLLAF G  RRVLV + RKIT +V  ++  V++KE   +A   A +  F+ +
Subjt:  IVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGLLAVAFAAVFSFVAV

AT4G03600.1 unknown protein8.3e-0844.87Show/hide
Query:  GLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGLLAVAFAAVFSFVAVVR
        G +++     VA  A MV WI+V+VLLAF G  RRVLV +GRKIT +V  ++  V++KE G +  AF AV ++  ++R
Subjt:  GLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGLLAVAFAAVFSFVAVVR

AT4G28330.1 unknown protein1.7e-0536.84Show/hide
Query:  IVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGLLAVAFAAVFSFV
        + G+L++A    +A  A +V WI+V+V +AFAG  R+ +V +GRK+T ++A ++  V++KE   +A+  A +  FV
Subjt:  IVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGLLAVAFAAVFSFV

AT4G28340.1 unknown protein8.6e-0535.53Show/hide
Query:  IVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGLLAVAFAAVFSFV
        + G+L++A    +A  A +V WI+V+V +AF    R+ +V +GRK+T ++A Y+  V++KE   +A+  A +  FV
Subjt:  IVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGLLAVAFAAVFSFV

AT5G50175.1 unknown protein1.4e-1044Show/hide
Query:  ATATATSAIFVLLSGLCFVVFNS---DNLMGRWLPIVGLLAVAGVAVV----AARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKE
        AT T T +  +      + +  +    N + + L  +G    A +++V    AARATMVAWITVLVLLAF+G RRRVL ++G+ ITADVAM L  V+++E
Subjt:  ATATATSAIFVLLSGLCFVVFNS---DNLMGRWLPIVGLLAVAGVAVV----AARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACACCAGCGACGGCGACGGCGACGTCGGCGATTTTTGTGCTGCTTTCAGGTTTGTGTTTTGTCGTTTTCAATTCTGATAATTTGATGGGGCGATGGCTACCAAT
TGTGGGGTTGTTGGCGGTTGCCGGAGTGGCGGTGGTGGCGGCCAGAGCCACCATGGTAGCGTGGATCACGGTGTTGGTGCTATTAGCGTTCGCCGGAAACCGCCGGCGGG
TTCTGGTAAAACAGGGGAGAAAGATCACCGCCGATGTAGCCATGTACTTGGCCGCCGTGATGGTTAAAGAAAGAGGGCTCCTCGCTGTTGCTTTCGCCGCCGTCTTCAGC
TTCGTCGCCGTCGTTCGTTCGACTGAGATCGATCTACTTTCTTTCTCTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACACCAGCGACGGCGACGGCGACGTCGGCGATTTTTGTGCTGCTTTCAGGTTTGTGTTTTGTCGTTTTCAATTCTGATAATTTGATGGGGCGATGGCTACCAAT
TGTGGGGTTGTTGGCGGTTGCCGGAGTGGCGGTGGTGGCGGCCAGAGCCACCATGGTAGCGTGGATCACGGTGTTGGTGCTATTAGCGTTCGCCGGAAACCGCCGGCGGG
TTCTGGTAAAACAGGGGAGAAAGATCACCGCCGATGTAGCCATGTACTTGGCCGCCGTGATGGTTAAAGAAAGAGGGCTCCTCGCTGTTGCTTTCGCCGCCGTCTTCAGC
TTCGTCGCCGTCGTTCGTTCGACTGAGATCGATCTACTTTCTTTCTCTGTTTAA
Protein sequenceShow/hide protein sequence
MSTPATATATSAIFVLLSGLCFVVFNSDNLMGRWLPIVGLLAVAGVAVVAARATMVAWITVLVLLAFAGNRRRVLVKQGRKITADVAMYLAAVMVKERGLLAVAFAAVFS
FVAVVRSTEIDLLSFSV