CuGenDBv2

Gene ID	HG10008802
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Rubredoxin-like domain-containing protein
Genome location	Chr10:26151325..26152473
RNA-Seq Expression	HG10008802
Synteny	HG10008802
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005506 - iron ion binding (molecular function)
InterPro domains	IPR024934 - Rubredoxin-like domain IPR024935 - Rubredoxin domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6589344.1 hypothetical protein SDJN03_14767, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-71

85.8

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Query:  SASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDK
        SASSLSL  HLP NPHSK+NQEDGGAD +SM  GS S R SLKSSFISPLR+IPS R      AAAPKFSMRVASKQAYICRDCGYIYNDRTPF+KLPD 
Subjt:  SASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDK

Query:  YFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF
        YFCPVCGAPKRRFR YEQSV KNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLN+VF
Subjt:  YFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF

XP_004138023.1 uncharacterized protein LOC101207574 isoform X1 [Cucumis sativus]

7.7e-75

87.36

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Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD
        MAS+SASSLS  FHLP  PH K+NQEDGG D NSMFL S S RLSLKSSFISPLRKIPSLR  NS VAAA+PKFSMRVASKQAYICRDCGYIYNDRTPFD
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD

Query:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF
        KLPDKYFCPVCGAPKRRFR YEQ+V+KNDNEFDVRKARKAQIQKDEAIGKVLPIAAA+GIVALVGLYLYLN+ F
Subjt:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF

XP_008464376.1 PREDICTED: uncharacterized protein LOC103502280 isoform X1 [Cucumis melo]

1.2e-75

88.51

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Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD
        MASVSASSLS  FHLP  PH K+NQEDGG D NSMFL S S RLSLKSSFISPLRKIPSLR  NS VAAA+PKFSMRVASKQAYICRDCGYIYNDRTPFD
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD

Query:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF
        KLPDKYFCPVCGAPKRRFR YEQ+VNKNDNEFD+RKARKAQIQKDEAIGKVLPIAAA+GIVALVGLYLYLN+VF
Subjt:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF

XP_022921625.1 uncharacterized protein LOC111429830 isoform X1 [Cucurbita moschata]

1.0e-71

85.06

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Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDK
        MAS SASSLS  FHLP NPHSK+NQEDGGAD +SM  GS S R SLKSSFISPLR+IPS R      AAAPKFSMRVASKQAYICRDCGYIYNDRTPF+K
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDK

Query:  LPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPI-AAAVGIVALVGLYLYLNNVF
        LPD YFCPVCGAPKRRFR YEQSV KNDNEFDVRKARKAQIQKDEAIGKVLPI AAAVGIVALVGLYLYLN+VF
Subjt:  LPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPI-AAAVGIVALVGLYLYLNNVF

XP_023516579.1 uncharacterized protein LOC111780418 isoform X1 [Cucurbita pepo subsp. pepo]

1.2e-72

84.97

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Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDK
        MAS SASSLS  FHLP NPHSK+NQEDGGAD  SM  GS S R SLKSSFISPLR+IPS R      AAAPKFSMRVASKQAYICRDCGYIYNDRTPF+K
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDK

Query:  LPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF
        LPD YFCPVCGAPKRRFR YEQSV KNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGI+ALVGLYLYLN+VF
Subjt:  LPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNF5 Rubredoxin-like domain-containing protein

3.7e-75

87.36

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Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD
        MAS+SASSLS  FHLP  PH K+NQEDGG D NSMFL S S RLSLKSSFISPLRKIPSLR  NS VAAA+PKFSMRVASKQAYICRDCGYIYNDRTPFD
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD

Query:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF
        KLPDKYFCPVCGAPKRRFR YEQ+V+KNDNEFDVRKARKAQIQKDEAIGKVLPIAAA+GIVALVGLYLYLN+ F
Subjt:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF

A0A1S3CLS9 uncharacterized protein LOC103502280 isoform X1

5.8e-76

88.51

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Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD
        MASVSASSLS  FHLP  PH K+NQEDGG D NSMFL S S RLSLKSSFISPLRKIPSLR  NS VAAA+PKFSMRVASKQAYICRDCGYIYNDRTPFD
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD

Query:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF
        KLPDKYFCPVCGAPKRRFR YEQ+VNKNDNEFD+RKARKAQIQKDEAIGKVLPIAAA+GIVALVGLYLYLN+VF
Subjt:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF

A0A5A7UPF0 Rubredoxin family protein

5.8e-76

88.51

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Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD
        MASVSASSLS  FHLP  PH K+NQEDGG D NSMFL S S RLSLKSSFISPLRKIPSLR  NS VAAA+PKFSMRVASKQAYICRDCGYIYNDRTPFD
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD

Query:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF
        KLPDKYFCPVCGAPKRRFR YEQ+VNKNDNEFD+RKARKAQIQKDEAIGKVLPIAAA+GIVALVGLYLYLN+VF
Subjt:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF

A0A6J1E6B5 uncharacterized protein LOC111429830 isoform X1

5.0e-72

85.06

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Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDK
        MAS SASSLS  FHLP NPHSK+NQEDGGAD +SM  GS S R SLKSSFISPLR+IPS R      AAAPKFSMRVASKQAYICRDCGYIYNDRTPF+K
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDK

Query:  LPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPI-AAAVGIVALVGLYLYLNNVF
        LPD YFCPVCGAPKRRFR YEQSV KNDNEFDVRKARKAQIQKDEAIGKVLPI AAAVGIVALVGLYLYLN+VF
Subjt:  LPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPI-AAAVGIVALVGLYLYLNNVF

E5GBM0 Electron transporter

5.8e-76

88.51

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Query:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD
        MASVSASSLS  FHLP  PH K+NQEDGG D NSMFL S S RLSLKSSFISPLRKIPSLR  NS VAAA+PKFSMRVASKQAYICRDCGYIYNDRTPFD
Subjt:  MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNS-VAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFD

Query:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF
        KLPDKYFCPVCGAPKRRFR YEQ+VNKNDNEFD+RKARKAQIQKDEAIGKVLPIAAA+GIVALVGLYLYLN+VF
Subjt:  KLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF

SwissProt top hits

e value

%identity

Alignment

O26258 Probable rubredoxin

2.5e-04

39.62

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Query:  VASKQAYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFR
        V++ + Y CR CGYIY+             TPF+ LP+ + CP CGA K+ F+
Subjt:  VASKQAYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFR

P04170 Rubredoxin-1

1.0e-05

51.22

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Query:  QAYICRDCGYIY----NDRTPFDKLPDKYFCPVCGAPKRRF
        Q Y+C  CGY Y    +D  PFD+LPD + CPVCG  K +F
Subjt:  QAYICRDCGYIY----NDRTPFDKLPDKYFCPVCGAPKRRF

P24297 Rubredoxin

3.9e-05

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Query:  YICRDCGYIYND-----------RTPFDKLPDKYFCPVCGAPKRRFRAYE
        ++C+ CGYIY++            T F++LPD + CP+CGAPK  F   E
Subjt:  YICRDCGYIYND-----------RTPFDKLPDKYFCPVCGAPKRRFRAYE

P58992 Rubredoxin-1

1.1e-04

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Query:  AYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRAY
        +++C +CGYIY+              PFDKLPD + CPVC  PK +F  +
Subjt:  AYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRAY

Q9V099 Rubredoxin

5.7e-04

41.67

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Query:  CRDCGYIYND-----------RTPFDKLPDKYFCPVCGAPKRRFRAYE
        C+ CGYIY++            T F+ LPD + CP+CGAPK  F   E
Subjt:  CRDCGYIYND-----------RTPFDKLPDKYFCPVCGAPKRRFRAYE

Arabidopsis top hits

e value

%identity

Alignment

AT5G17170.1 rubredoxin family protein

1.7e-08

35.64

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Query:  AAPKFSMRVASKQ----AYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVL-PIAAAVGIVALV
        A P+F  ++   Q     +IC DCG+IY     FD+ PD Y CP C APK+RF  Y+ +  K                   AIG  L PI   VG++A +
Subjt:  AAPKFSMRVASKQ----AYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVL-PIAAAVGIVALV

Query:  G
        G
Subjt:  G

AT5G51010.1 Rubredoxin-like superfamily protein

4.1e-42

61.54

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Query:  ADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVA-AAAPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRAYEQSVNKND
        A  +S+ L  T+  L  +SSF+ P   +  L    S++ ++AP+FSMRV+SKQAYICRDCGYIYNDRTPFDKLPD YFCPVC APKRRFRAY   V+KN 
Subjt:  ADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVA-AAAPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRAYEQSVNKND

Query:  NEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNN
        N+ DVRKARKA++Q+DEA+GK LPI  AVG++AL  LY Y+N+
Subjt:  NEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNN

Sequences

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CDS sequence

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ATGGCTTCCGTTTCAGCTTCTTCTCTCAGTCTCAGATTCCACCTACCATCGAACCCACATTCCAAGGTTAACCAGGAAGACGGCGGCGCTGATAGCAACTCCATGTTTTT
GGGTTCTACTTCCAAACGTTTATCTTTGAAATCCTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGACGCCAAACTCTGTTGCTGCTGCTGCCCCCAAGTTCT
CCATGCGCGTCGCTTCCAAACAAGCCTATATCTGCCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGACAAATTGCCTGATAAGTATTTCTGTCCTGTATGT
GGTGCTCCTAAGCGACGATTTAGAGCTTATGAGCAATCTGTGAATAAAAATGATAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAGAAAGATGAAGCTAT
TGGGAAGGTGCTGCCTATTGCTGCTGCAGTGGGAATCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAACGTCTTCTAG

mRNA sequence

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Protein sequence

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MASVSASSLSLRFHLPSNPHSKVNQEDGGADSNSMFLGSTSKRLSLKSSFISPLRKIPSLRTPNSVAAAAPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVC
GAPKRRFRAYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLYLNNVF

HG10008802 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome