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HG10008828 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008828
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr06:98383..98730
RNA-Seq ExpressionHG10008828
SyntenyHG10008828
Gene Ontology termsGO:0017004 - cytochrome complex assembly (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3452199.1 hypothetical protein FNV43_RR08297 [Rhamnella rubrinervis]1.3e-1487.76Show/hide
Query:  MDSIGVSRALPKEASGNDLSWAYAMKNDLLGKKFCAYVDGSLQFPKTRE
        MDSIG SRALPKEASGN L WAYAMKN  LGKK CAYVDGSLQFPKTRE
Subjt:  MDSIGVSRALPKEASGNDLSWAYAMKNDLLGKKFCAYVDGSLQFPKTRE

KJB09756.1 hypothetical protein B456_001G162300 [Gossypium raimondii]2.9e-0989.19Show/hide
Query:  VSRALPKEASGNDLSWAYAMKNDLLGKKFCAYVDGSL
        +SRALPKEASGNDLSWAYAMKNDL GK  CAYVDGSL
Subjt:  VSRALPKEASGNDLSWAYAMKNDLLGKKFCAYVDGSL

PHU02075.1 hypothetical protein BC332_27326 [Capsicum chinense]6.0e-0793.94Show/hide
Query:  MDSIGVSRALPKEASGNDLSWAYAMKNDLLGKK
        MDSIG SRAL KEASGNDLSWAYAMKNDLLGKK
Subjt:  MDSIGVSRALPKEASGNDLSWAYAMKNDLLGKK

TQE08519.1 hypothetical protein C1H46_005825 [Malus baccata]5.0e-3080Show/hide
Query:  MDSIGVSRALPKEASGNDLSWAYAMKNDLLGKK-FCAYVDGSLQFPKTREGYFPTKDEKCLASNEMTCVLPLSPIYTVTSFATAKDIWET
        MDSIG S ALPKEASGN LSWAYAMKNDLLGKK  CAYVDGSLQFPKTREG FPTKDEKCLASN MTCVLPLSPIYT          W T
Subjt:  MDSIGVSRALPKEASGNDLSWAYAMKNDLLGKK-FCAYVDGSLQFPKTREGYFPTKDEKCLASNEMTCVLPLSPIYTVTSFATAKDIWET

WP_131767158.1 hypothetical protein [Candidatus Frankia datiscae]4.7e-5288.7Show/hide
Query:  MDSIGVSRALPKEASGNDLSWAYAMKNDLLGKKFCAYVDGSLQFPKTREGYFPTKDEKCLASNEMTCVLPLSPIYTVTSFATAKDIWETISHLDSQDDSP
        MDSIG SRALPKE SGNDLSW YAMKNDLLGK F AYVDGSLQFPKTREG FPTKDEKCLASN +TCVLPLSPIYTVTSFATAKD+++ ISHLDSQ+DSP
Subjt:  MDSIGVSRALPKEASGNDLSWAYAMKNDLLGKKFCAYVDGSLQFPKTREGYFPTKDEKCLASNEMTCVLPLSPIYTVTSFATAKDIWETISHLDSQDDSP

Query:  PFYQLQHEEHALAYG
        PFYQLQHEEHALAYG
Subjt:  PFYQLQHEEHALAYG

TrEMBL top hitse value%identityAlignment
A0A0D2PZN2 Uncharacterized protein1.4e-0989.19Show/hide
Query:  VSRALPKEASGNDLSWAYAMKNDLLGKKFCAYVDGSL
        +SRALPKEASGNDLSWAYAMKNDL GK  CAYVDGSL
Subjt:  VSRALPKEASGNDLSWAYAMKNDLLGKKFCAYVDGSL

A0A2G3B6G0 Uncharacterized protein2.9e-0793.94Show/hide
Query:  MDSIGVSRALPKEASGNDLSWAYAMKNDLLGKK
        MDSIG SRAL KEASGNDLSWAYAMKNDLLGKK
Subjt:  MDSIGVSRALPKEASGNDLSWAYAMKNDLLGKK

A0A2N9G8J8 Uncharacterized protein3.3e-5188.7Show/hide
Query:  MDSIGVSRALPKEASGNDLSWAYAMKNDLLGKKFCAYVDGSLQFPKTREGYFPTKDEKCLASNEMTCVLPLSPIYTVTSFATAKDIWETISHLDSQDDSP
        MDSIG SRALPKEASGNDLSWAYAMKNDLLGKK CAYV GSLQF KTREG FPTKDEKCLA N M CVLPLSPIYTVTSFATAK+IW+ IS+L SQDDSP
Subjt:  MDSIGVSRALPKEASGNDLSWAYAMKNDLLGKKFCAYVDGSLQFPKTREGYFPTKDEKCLASNEMTCVLPLSPIYTVTSFATAKDIWETISHLDSQDDSP

Query:  PFYQLQHEEHALAYG
        PFYQLQHEEHALAYG
Subjt:  PFYQLQHEEHALAYG

A0A540NBV2 Uncharacterized protein2.4e-3080Show/hide
Query:  MDSIGVSRALPKEASGNDLSWAYAMKNDLLGKK-FCAYVDGSLQFPKTREGYFPTKDEKCLASNEMTCVLPLSPIYTVTSFATAKDIWET
        MDSIG S ALPKEASGN LSWAYAMKNDLLGKK  CAYVDGSLQFPKTREG FPTKDEKCLASN MTCVLPLSPIYT          W T
Subjt:  MDSIGVSRALPKEASGNDLSWAYAMKNDLLGKK-FCAYVDGSLQFPKTREGYFPTKDEKCLASNEMTCVLPLSPIYTVTSFATAKDIWET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCATAGGCGTTTCCCGTGCTCTTCCGAAAGAAGCATCTGGAAATGACTTGTCATGGGCTTATGCGATGAAGAATGATTTGCTCGGGAAAAAATTTTGTGCTTA
TGTGGATGGGTCGCTTCAATTTCCCAAGACTCGAGAAGGATATTTTCCTACAAAAGATGAAAAGTGCTTAGCTTCAAATGAGATGACTTGTGTACTTCCTTTGAGCCCCA
TATACACCGTCACCTCTTTTGCGACCGCTAAAGATATTTGGGAAACCATAAGTCATCTTGATTCTCAGGATGATTCTCCACCTTTCTATCAGTTGCAACATGAAGAACAT
GCCTTAGCTTATGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCCATAGGCGTTTCCCGTGCTCTTCCGAAAGAAGCATCTGGAAATGACTTGTCATGGGCTTATGCGATGAAGAATGATTTGCTCGGGAAAAAATTTTGTGCTTA
TGTGGATGGGTCGCTTCAATTTCCCAAGACTCGAGAAGGATATTTTCCTACAAAAGATGAAAAGTGCTTAGCTTCAAATGAGATGACTTGTGTACTTCCTTTGAGCCCCA
TATACACCGTCACCTCTTTTGCGACCGCTAAAGATATTTGGGAAACCATAAGTCATCTTGATTCTCAGGATGATTCTCCACCTTTCTATCAGTTGCAACATGAAGAACAT
GCCTTAGCTTATGGGTAA
Protein sequenceShow/hide protein sequence
MDSIGVSRALPKEASGNDLSWAYAMKNDLLGKKFCAYVDGSLQFPKTREGYFPTKDEKCLASNEMTCVLPLSPIYTVTSFATAKDIWETISHLDSQDDSPPFYQLQHEEH
ALAYG