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HG10008833 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008833
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProton_antipo_M domain-containing protein
Genome locationChr06:117287..120364
RNA-Seq ExpressionHG10008833
SyntenyHG10008833
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF24045.1 conserved hypothetical protein [Ricinus communis]1.6e-2454.29Show/hide
Query:  KRTAAPTTRTRVRGVLSVSYHSCSGKDPQLSKRKRPPTARITVANPPFTQWIALILF---------QEKKAEM---------------------------
        K   + TTRTRV  VLS+SYHSCSGKDPQLS  K PPTARITVANPP TQWIALIL          +++K E                            
Subjt:  KRTAAPTTRTRVRGVLSVSYHSCSGKDPQLSKRKRPPTARITVANPPFTQWIALILF---------QEKKAEM---------------------------

Query:  -----REKLVMIAMNAAFEDMYKKVFADSYQHGAPLRRGA
             R+K+VMIAMNAA ED+YKKVFADSYQHGAPL RGA
Subjt:  -----REKLVMIAMNAAFEDMYKKVFADSYQHGAPLRRGA

EEF27212.1 conserved hypothetical protein, partial [Ricinus communis]7.4e-0956.76Show/hide
Query:  LPALSRGRTGREKEKEQRIYKSNGRRMADLLKEYKDAFQTPKSNPSGLTPGAGPNRKALDGLTASEIKKAAGPM
        LP +SR RTGREKEKEQRIYKSNG RMAD L     AF T K NPSGLTP  GP  K          K+++ P+
Subjt:  LPALSRGRTGREKEKEQRIYKSNGRRMADLLKEYKDAFQTPKSNPSGLTPGAGPNRKALDGLTASEIKKAAGPM

KAD0189489.1 hypothetical protein E3N88_44657 [Mikania micrantha]1.3e-0883.72Show/hide
Query:  TTRTRVRGVLSVSYHSCSGKDPQLSKRKRPPTARITVANPPFT
        TTRTRV G+LSVSYHSCS KDPQLS  K PPT RITVANPPFT
Subjt:  TTRTRVRGVLSVSYHSCSGKDPQLSKRKRPPTARITVANPPFT

KZM91154.1 hypothetical protein DCAR_021481 [Daucus carota subsp. sativus]6.9e-0791.18Show/hide
Query:  REKLVMIAMNAAFEDMYKKVFADSYQHGAPLRRG
        REKLVMIAMNAA ED+YKKVFADSYQHGAPL RG
Subjt:  REKLVMIAMNAAFEDMYKKVFADSYQHGAPLRRG

PHT68651.1 hypothetical protein T459_28138 [Capsicum annuum]3.9e-1880.6Show/hide
Query:  KSNPSGLTPGAGPNRKALDGLTASEIKKAAGPMCKTLPRESLSPMRIQKVFGQDKKGTRPLFERDKS
        K   S LTP A PNRKAL GL ASEIKKAAGPMCKTLPRESLS MRI+KV GQDKKGTRPL  RDKS
Subjt:  KSNPSGLTPGAGPNRKALDGLTASEIKKAAGPMCKTLPRESLSPMRIQKVFGQDKKGTRPLFERDKS

TrEMBL top hitse value%identityAlignment
A0A2G2YGD6 Proton_antipo_M domain-containing protein1.9e-1880.6Show/hide
Query:  KSNPSGLTPGAGPNRKALDGLTASEIKKAAGPMCKTLPRESLSPMRIQKVFGQDKKGTRPLFERDKS
        K   S LTP A PNRKAL GL ASEIKKAAGPMCKTLPRESLS MRI+KV GQDKKGTRPL  RDKS
Subjt:  KSNPSGLTPGAGPNRKALDGLTASEIKKAAGPMCKTLPRESLSPMRIQKVFGQDKKGTRPLFERDKS

A0A5N6LC02 40S ribosomal protein S86.1e-0983.72Show/hide
Query:  TTRTRVRGVLSVSYHSCSGKDPQLSKRKRPPTARITVANPPFT
        TTRTRV G+LSVSYHSCS KDPQLS  K PPT RITVANPPFT
Subjt:  TTRTRVRGVLSVSYHSCSGKDPQLSKRKRPPTARITVANPPFT

A0A803Q9F3 Uncharacterized protein1.8e-1362.35Show/hide
Query:  GLATTEKVKPALPALSRGRTGREKEKEQRIYKSNGRRMADLLKEYKDAFQT-PKSNPSGLTPGAGPNRKALDGLTASEIKKAAGP
        GL+    V P+   L   +  REKEKEQRIYKSNGRRMAD L     AF+T  K NPSGLTPG  PNRK LD L AS+IKKAAGP
Subjt:  GLATTEKVKPALPALSRGRTGREKEKEQRIYKSNGRRMADLLKEYKDAFQT-PKSNPSGLTPGAGPNRKALDGLTASEIKKAAGP

B9TAA3 Uncharacterized protein (Fragment)3.6e-0956.76Show/hide
Query:  LPALSRGRTGREKEKEQRIYKSNGRRMADLLKEYKDAFQTPKSNPSGLTPGAGPNRKALDGLTASEIKKAAGPM
        LP +SR RTGREKEKEQRIYKSNG RMAD L     AF T K NPSGLTP  GP  K          K+++ P+
Subjt:  LPALSRGRTGREKEKEQRIYKSNGRRMADLLKEYKDAFQTPKSNPSGLTPGAGPNRKALDGLTASEIKKAAGPM

B9TJC0 Uncharacterized protein7.9e-2554.29Show/hide
Query:  KRTAAPTTRTRVRGVLSVSYHSCSGKDPQLSKRKRPPTARITVANPPFTQWIALILF---------QEKKAEM---------------------------
        K   + TTRTRV  VLS+SYHSCSGKDPQLS  K PPTARITVANPP TQWIALIL          +++K E                            
Subjt:  KRTAAPTTRTRVRGVLSVSYHSCSGKDPQLSKRKRPPTARITVANPPFTQWIALILF---------QEKKAEM---------------------------

Query:  -----REKLVMIAMNAAFEDMYKKVFADSYQHGAPLRRGA
             R+K+VMIAMNAA ED+YKKVFADSYQHGAPL RGA
Subjt:  -----REKLVMIAMNAAFEDMYKKVFADSYQHGAPLRRGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACCGTTAACCATGCTACCAGGCCTAGCTACCACAGAGAAAGTCAAGCCGGCTCTTCCTGCTCTCTCTAGGGGGAGAACTGGAAGAGAGAAGGAAAAAGAGCAAAG
GATTTACAAGTCTAATGGGAGAAGAATGGCTGACCTTTTGAAAGAATACAAGGATGCCTTCCAGACTCCAAAATCTAACCCAAGCGGTCTAACCCCCGGGGCGGGCCCCA
ACCGAAAGGCGCTAGACGGACTAACGGCAAGCGAGATAAAGAAAGCAGCTGGCCCTATGTGTAAAACCTTGCCGCGGGAGAGTCTTTCTCCAATGAGAATCCAGAAAGTT
TTTGGGCAAGACAAGAAAGGAACTCGCCCTTTGTTTGAAAGGGATAAGAGCGGATTGCTGGCTGGAAAAGGAAACCCCAGCGACCAAGCACTTCCGCCCCCAAAAGCGGA
GACCGAACAACCGCCAAGTTGTCGAGGACACGGTCGAGGATGGATGAAACCAATCATCAGTGCAAATCGCGCAAGCGAAGCCGGGAAACGGACCGCTGCGCCAACGACTA
GGACTCGTGTCCGAGGAGTTTTGAGCGTGAGCTACCACTCATGCAGCGGCAAAGACCCGCAACTCTCGAAGAGGAAGAGGCCACCAACCGCCCGAATCACTGTAGCAAAC
CCTCCCTTTACTCAATGGATAGCGCTTATCCTCTTTCAAGAGAAAAAAGCAGAAATGAGGGAGAAACTAGTGATGATTGCCATGAATGCTGCCTTCGAGGACATGTACAA
GAAGGTCTTTGCCGATTCCTATCAACATGGTGCACCTCTCCGTAGAGGGGCCCGTGGAGACTTTGACCGAATGAATAGGGATAAATTTCTCGACATTTTGATTGAGGAAG
AGAATCCAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTACCGTTAACCATGCTACCAGGCCTAGCTACCACAGAGAAAGTCAAGCCGGCTCTTCCTGCTCTCTCTAGGGGGAGAACTGGAAGAGAGAAGGAAAAAGAGCAAAG
GATTTACAAGTCTAATGGGAGAAGAATGGCTGACCTTTTGAAAGAATACAAGGATGCCTTCCAGACTCCAAAATCTAACCCAAGCGGTCTAACCCCCGGGGCGGGCCCCA
ACCGAAAGGCGCTAGACGGACTAACGGCAAGCGAGATAAAGAAAGCAGCTGGCCCTATGTGTAAAACCTTGCCGCGGGAGAGTCTTTCTCCAATGAGAATCCAGAAAGTT
TTTGGGCAAGACAAGAAAGGAACTCGCCCTTTGTTTGAAAGGGATAAGAGCGGATTGCTGGCTGGAAAAGGAAACCCCAGCGACCAAGCACTTCCGCCCCCAAAAGCGGA
GACCGAACAACCGCCAAGTTGTCGAGGACACGGTCGAGGATGGATGAAACCAATCATCAGTGCAAATCGCGCAAGCGAAGCCGGGAAACGGACCGCTGCGCCAACGACTA
GGACTCGTGTCCGAGGAGTTTTGAGCGTGAGCTACCACTCATGCAGCGGCAAAGACCCGCAACTCTCGAAGAGGAAGAGGCCACCAACCGCCCGAATCACTGTAGCAAAC
CCTCCCTTTACTCAATGGATAGCGCTTATCCTCTTTCAAGAGAAAAAAGCAGAAATGAGGGAGAAACTAGTGATGATTGCCATGAATGCTGCCTTCGAGGACATGTACAA
GAAGGTCTTTGCCGATTCCTATCAACATGGTGCACCTCTCCGTAGAGGGGCCCGTGGAGACTTTGACCGAATGAATAGGGATAAATTTCTCGACATTTTGATTGAGGAAG
AGAATCCAGGATGA
Protein sequenceShow/hide protein sequence
MLPLTMLPGLATTEKVKPALPALSRGRTGREKEKEQRIYKSNGRRMADLLKEYKDAFQTPKSNPSGLTPGAGPNRKALDGLTASEIKKAAGPMCKTLPRESLSPMRIQKV
FGQDKKGTRPLFERDKSGLLAGKGNPSDQALPPPKAETEQPPSCRGHGRGWMKPIISANRASEAGKRTAAPTTRTRVRGVLSVSYHSCSGKDPQLSKRKRPPTARITVAN
PPFTQWIALILFQEKKAEMREKLVMIAMNAAFEDMYKKVFADSYQHGAPLRRGARGDFDRMNRDKFLDILIEEENPG