; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008836 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008836
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNADH dehydrogenase subunit 9
Genome locationChr06:140809..141495
RNA-Seq ExpressionHG10008836
SyntenyHG10008836
Gene Ontology termsNA
InterPro domainsIPR037232 - NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGY62835.1 orf224 [Eruca vesicaria subsp. sativa]2.9e-4046.22Show/hide
Query:  FLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKW--------------------------------------------------
        FL     TG+FR+VF +  SKKRNYKKAFFIFMDNQSIFKYSWETLPKKW                                                  
Subjt:  FLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKW--------------------------------------------------

Query:  -------------------------------------PAGGS------EKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV
                                             P+ G       + FG+  +  P + RI   STDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV
Subjt:  -------------------------------------PAGGS------EKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV

Query:  SEPIEMTQEFRYFDFASPWEQRSDG
        SEPIEMTQEFRYFDFASPWEQRSDG
Subjt:  SEPIEMTQEFRYFDFASPWEQRSDG

CAA3016521.1 NADH dehydrogenase subunit 9 [Olea europaea subsp. europaea]8.1e-5150.86Show/hide
Query:  MPKDSHAFLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKW-------------------------------------------
        MPKDSHAFLGWTNPTG FRQVFLHF SKKRNYKKAFFIFMDNQ IFKYSWE LPKKW                                           
Subjt:  MPKDSHAFLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKW-------------------------------------------

Query:  --------------------------------------------PAGGS------EKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYD
                                                    P+ G       + FG+  +  P + RI   STDYGFEGHPLRKDLPLSGYVEVRYD
Subjt:  --------------------------------------------PAGGS------EKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYD

Query:  DPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
        DPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Subjt:  DPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG

CAA7039598.1 unnamed protein product [Microthlaspi erraticum]2.9e-4046.22Show/hide
Query:  FLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKW--------------------------------------------------
        FL     TG+FR+VF +  SKKRNYKKAFFIFMDNQSIFKYSWETLPKKW                                                  
Subjt:  FLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKW--------------------------------------------------

Query:  -------------------------------------PAGGS------EKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV
                                             P+ G       + FG+  +  P + RI   STDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV
Subjt:  -------------------------------------PAGGS------EKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV

Query:  SEPIEMTQEFRYFDFASPWEQRSDG
        SEPIEMTQEFRYFDFASPWEQRSDG
Subjt:  SEPIEMTQEFRYFDFASPWEQRSDG

KAE8663211.1 NADH dehydrogenase iron-sulfur protein 3 [Hibiscus syriacus]1.0e-4061.15Show/hide
Query:  PKDSHAFL-GWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPK------------------KWPAGGSEKFGICLVFLPSIIRIYAVS
        PK    FL G T P    +  F+   SKKRNYKKAFFIFMDNQ IFKYSW   P+                  +W     + FG+  +  P + RI   S
Subjt:  PKDSHAFL-GWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPK------------------KWPAGGSEKFGICLVFLPSIIRIYAVS

Query:  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
        TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Subjt:  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG

KAG2247431.1 hypothetical protein Bca52824_087059 [Brassica carinata]8.4e-4045.78Show/hide
Query:  FLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKW--------------------------------------------------
        FL     TG+FR+VF +  SKKRNYKK FFIFMDNQSIFKYSWETLPKKW                                                  
Subjt:  FLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKW--------------------------------------------------

Query:  -------------------------------------PAGGS------EKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV
                                             P+ G       + FG+  +  P + RI   STDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV
Subjt:  -------------------------------------PAGGS------EKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV

Query:  SEPIEMTQEFRYFDFASPWEQRSDG
        SEPIEMTQEFRYFDFASPWEQRSDG
Subjt:  SEPIEMTQEFRYFDFASPWEQRSDG

TrEMBL top hitse value%identityAlignment
A0A088BGI6 Orf2241.4e-4046.22Show/hide
Query:  FLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKW--------------------------------------------------
        FL     TG+FR+VF +  SKKRNYKKAFFIFMDNQSIFKYSWETLPKKW                                                  
Subjt:  FLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKW--------------------------------------------------

Query:  -------------------------------------PAGGS------EKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV
                                             P+ G       + FG+  +  P + RI   STDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV
Subjt:  -------------------------------------PAGGS------EKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV

Query:  SEPIEMTQEFRYFDFASPWEQRSDG
        SEPIEMTQEFRYFDFASPWEQRSDG
Subjt:  SEPIEMTQEFRYFDFASPWEQRSDG

A0A3P6H4S7 Complex1_30kDa domain-containing protein1.4e-4046.22Show/hide
Query:  FLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKW--------------------------------------------------
        FL     TG+FR+VF +  SKKRNYKKAFFIFMDNQSIFKYSWETLPKKW                                                  
Subjt:  FLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKW--------------------------------------------------

Query:  -------------------------------------PAGGS------EKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV
                                             P+ G       + FG+  +  P + RI   STDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV
Subjt:  -------------------------------------PAGGS------EKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV

Query:  SEPIEMTQEFRYFDFASPWEQRSDG
        SEPIEMTQEFRYFDFASPWEQRSDG
Subjt:  SEPIEMTQEFRYFDFASPWEQRSDG

A0A650GBH7 Complex1_30kDa domain-containing protein1.4e-4046.22Show/hide
Query:  FLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKW--------------------------------------------------
        FL     TG+FR+VF +  SKKRNYKKAFFIFMDNQSIFKYSWETLPKKW                                                  
Subjt:  FLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKW--------------------------------------------------

Query:  -------------------------------------PAGGS------EKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV
                                             P+ G       + FG+  +  P + RI   STDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV
Subjt:  -------------------------------------PAGGS------EKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV

Query:  SEPIEMTQEFRYFDFASPWEQRSDG
        SEPIEMTQEFRYFDFASPWEQRSDG
Subjt:  SEPIEMTQEFRYFDFASPWEQRSDG

A0A6A2WS33 NADH dehydrogenase iron-sulfur protein 34.8e-4161.15Show/hide
Query:  PKDSHAFL-GWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPK------------------KWPAGGSEKFGICLVFLPSIIRIYAVS
        PK    FL G T P    +  F+   SKKRNYKKAFFIFMDNQ IFKYSW   P+                  +W     + FG+  +  P + RI   S
Subjt:  PKDSHAFL-GWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPK------------------KWPAGGSEKFGICLVFLPSIIRIYAVS

Query:  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
        TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Subjt:  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG

A0A6D2JIB6 Complex1_30kDa domain-containing protein1.4e-4046.22Show/hide
Query:  FLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKW--------------------------------------------------
        FL     TG+FR+VF +  SKKRNYKKAFFIFMDNQSIFKYSWETLPKKW                                                  
Subjt:  FLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKW--------------------------------------------------

Query:  -------------------------------------PAGGS------EKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV
                                             P+ G       + FG+  +  P + RI   STDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV
Subjt:  -------------------------------------PAGGS------EKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV

Query:  SEPIEMTQEFRYFDFASPWEQRSDG
        SEPIEMTQEFRYFDFASPWEQRSDG
Subjt:  SEPIEMTQEFRYFDFASPWEQRSDG

SwissProt top hitse value%identityAlignment
P80261 NADH dehydrogenase [ubiquinone] iron-sulfur protein 32.4e-2974.7Show/hide
Query:  WPAGGSEKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
        W     + FG+  +  P + RI    TDYGFEGHPLRKD PLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Subjt:  WPAGGSEKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG

Q33994 NADH dehydrogenase [ubiquinone] iron-sulfur protein 35.9e-2872.84Show/hide
Query:  WPAGGSEKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRS
        W     + FG+  +  P + RI    TDYGFEGHPLRKD PLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQR+
Subjt:  WPAGGSEKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRS

Q35322 NADH dehydrogenase [ubiquinone] iron-sulfur protein 31.1e-2974.7Show/hide
Query:  WPAGGSEKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
        W     + FG+  +  P + RI    TDYGFEGHPLRKD PLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Subjt:  WPAGGSEKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG

Q37787 NADH dehydrogenase [ubiquinone] iron-sulfur protein 35.9e-2872.84Show/hide
Query:  WPAGGSEKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRS
        W     + FG+  +  P + RI    TDYGFEGHPLRKD PLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQR+
Subjt:  WPAGGSEKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRS

Q95748 NADH dehydrogenase [ubiquinone] iron-sulfur protein 32.4e-2973.49Show/hide
Query:  WPAGGSEKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
        W     + FG+  +  P + RI    TDYGFEGHPLRKD PLSGYV+VRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Subjt:  WPAGGSEKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG

Arabidopsis top hitse value%identityAlignment
ATMG00070.1 NADH dehydrogenase subunit 96.9e-3275Show/hide
Query:  KWPAGGSEKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
        +W     + FG+  +  P + RI   STDYGFEGHPLRKDLPLSGYV+VRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG
Subjt:  KWPAGGSEKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEFRYFDFASPWEQRSDG

ATMG00070.1 NADH dehydrogenase subunit 92.1e-0494.44Show/hide
Query:  MDNQSIFKYSWETLPKKW
        MDNQ IFKYSWETLPKKW
Subjt:  MDNQSIFKYSWETLPKKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAAAGACTCCCATGCCTTTCTTGGTTGGACCAACCCAACCGGCGATTTCCGACAAGTCTTTCTTCATTTTTCGAGCAAGAAGCGGAACTACAAGAAAGCTTTCTT
TATCTTTATGGATAACCAATCCATTTTCAAATATAGTTGGGAGACTCTCCCCAAGAAATGGCCGGCCGGTGGGAGCGAGAAGTTTGGGATATGTTTGGTGTTTCTTCCAT
CAATCATCCGGATCTACGCCGTATCAACAGATTATGGTTTCGAGGGTCATCCATTACGAAAAGACCTTCCTCTGAGTGGATATGTGGAAGTACGCTATGATGATCCAGAG
AAACGTGTGGTTTCTGAACCCATTGAGATGACCCAAGAATTTCGCTATTTCGATTTTGCTAGTCCTTGGGAACAGCGTAGCGACGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCAAAGACTCCCATGCCTTTCTTGGTTGGACCAACCCAACCGGCGATTTCCGACAAGTCTTTCTTCATTTTTCGAGCAAGAAGCGGAACTACAAGAAAGCTTTCTT
TATCTTTATGGATAACCAATCCATTTTCAAATATAGTTGGGAGACTCTCCCCAAGAAATGGCCGGCCGGTGGGAGCGAGAAGTTTGGGATATGTTTGGTGTTTCTTCCAT
CAATCATCCGGATCTACGCCGTATCAACAGATTATGGTTTCGAGGGTCATCCATTACGAAAAGACCTTCCTCTGAGTGGATATGTGGAAGTACGCTATGATGATCCAGAG
AAACGTGTGGTTTCTGAACCCATTGAGATGACCCAAGAATTTCGCTATTTCGATTTTGCTAGTCCTTGGGAACAGCGTAGCGACGGATAA
Protein sequenceShow/hide protein sequence
MPKDSHAFLGWTNPTGDFRQVFLHFSSKKRNYKKAFFIFMDNQSIFKYSWETLPKKWPAGGSEKFGICLVFLPSIIRIYAVSTDYGFEGHPLRKDLPLSGYVEVRYDDPE
KRVVSEPIEMTQEFRYFDFASPWEQRSDG