; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008840 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008840
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRibosomal protein S1
Genome locationChr06:153854..154357
RNA-Seq ExpressionHG10008840
SyntenyHG10008840
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QCB20452.1 ribosomal protein S1 [Actinidia chinensis]5.5e-8697.6Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQI ERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKIW+TNTKVKGFIIEK KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

QDS78274.2 ribosomal protein S1 [Camellia sinensis var. assamica]9.4e-8697.01Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQ+EPTGVPINRATRFENKVGSLDLVAGESLIKEQI ERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKIW+TNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIS+RISNDRFTIESINPKRTNIVVF
Subjt:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

XP_022974554.1 uncharacterized protein LOC111473236 [Cucurbita maxima]8.5e-8798.2Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKE I ERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISN+RFTIESINPKRTNIVVF
Subjt:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

YP_009676235.1 ribosomal protein S1 [Camellia sinensis]9.4e-8697.01Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQ+EPTGVPINRATRFENKVGSLDLVAGESLIKEQI ERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKIW+TNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIS+RISNDRFTIESINPKRTNIVVF
Subjt:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

YP_009706796.1 ribosomal protein S1 [Ilex pubescens]8.5e-8798.2Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQI ERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKIW+TNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

TrEMBL top hitse value%identityAlignment
A0A4D6FU87 Ribosomal protein S12.7e-8697.6Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQI ERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKIW+TNTKVKGFIIEK KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

A0A4D6J5C9 Ribosomal protein S12.7e-8697.6Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQI ERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKIW+TNTKVKGFIIEK KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

A0A4D6J9G9 Ribosomal protein S12.7e-8697.6Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQI ERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKIW+TNTKVKGFIIEK KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

A0A5C2I386 Ribosomal protein S14.1e-8798.2Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQI ERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKIW+TNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Subjt:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

A0A6J1IHY3 uncharacterized protein LOC1114732364.1e-8798.2Show/hide
Query:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
        MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKE I ERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA
Subjt:  MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRA

Query:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
        WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISN+RFTIESINPKRTNIVVF
Subjt:  WMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF

SwissProt top hitse value%identityAlignment
P26863 Ribosomal protein S1, mitochondrial1.2e-1434.68Show/hide
Query:  LVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDV-VAGEPLFLLPR----RFRQ
        LVD G  TP IC Q E   VPI +  RF                                               G  DV V GEP  LLP+    + ++
Subjt:  LVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDV-VAGEPLFLLPR----RFRQ

Query:  NRAWMELNKIWQTNTK-VKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDR---FTIESINPKRTNIVV
           W+EL KIW+++   VKGFI+  VKGGY+VAIAG+I FLP   L S+++   +   F+I ++ PK +NIVV
Subjt:  NRAWMELNKIWQTNTK-VKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDR---FTIESINPKRTNIVV

P37985 30S ribosomal protein S17.1e-0432.97Show/hide
Query:  GEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISND---------RFTIESINPKRTNIVV
        GE L L   + +++ AW+ L K ++ +  V G I  KVKGG++V + G   FLP   L+  R   D          F +  ++ KR N+VV
Subjt:  GEPLFLLPRRFRQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISND---------RFTIESINPKRTNIVV

Q6NDP1 30S ribosomal protein S14.9e-0536.71Show/hide
Query:  RQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLP-----FRPL--ISQRISNDR-FTIESINPKRTNIVV
        R+  +W +L K +Q N KV G I  +VKGG++V + G + FLP      RP+  ++  ++N + F I  ++ +R NIVV
Subjt:  RQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLP-----FRPL--ISQRISNDR-FTIESINPKRTNIVV

Q83E09 30S ribosomal protein S18.4e-0535.44Show/hide
Query:  RQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLP-----FRPLISQRISNDR---FTIESINPKRTNIVV
        R+ +AW EL K ++    VKG IIE+VKGG++V +     FLP      +P+       D+   F I  ++ +R N+VV
Subjt:  RQNRAWMELNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLP-----FRPLISQRISNDR---FTIESINPKRTNIVV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTGGATGCAGGACCTGGGACCCCCAGAATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCACCAGGTTTGAGAATAAGGTGGGATCCCT
GGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCAAATTTGGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCAAAGAGCGAGCTGCCGCCAGGTTTA
ATGATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCGCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTTGGCAAACG
AATACAAAAGTCAAAGGCTTTATTATTGAGAAAGTCAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCCGTCCTCTCATAAGTCAAAGGAT
ATCGAATGATCGATTCACCATTGAGAGCATTAACCCCAAAAGAACGAATATTGTGGTGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGTGGATGCAGGACCTGGGACCCCCAGAATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCACCAGGTTTGAGAATAAGGTGGGATCCCT
GGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCAAATTTGGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCAAAGAGCGAGCTGCCGCCAGGTTTA
ATGATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCGCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTTGGCAAACG
AATACAAAAGTCAAAGGCTTTATTATTGAGAAAGTCAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCCGTCCTCTCATAAGTCAAAGGAT
ATCGAATGATCGATTCACCATTGAGAGCATTAACCCCAAAAGAACGAATATTGTGGTGTTCTAA
Protein sequenceShow/hide protein sequence
MFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGESLIKEQIWERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIWQT
NTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF