; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008847 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008847
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr06:200756..203536
RNA-Seq ExpressionHG10008847
SyntenyHG10008847
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
InterPro domainsIPR022546 - Uncharacterised protein family Ycf68


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7039585.1 unnamed protein product [Microthlaspi erraticum]2.6e-7776.47Show/hide
Query:  GSSQGAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFA----------------------------TEVRRGADDILEEGGDDVKSAWPLWAGPHT
        GS   AAWLSSARVVRCLVKSYNERNPR VLLRHAPKEK  A                            T  R  A DILEEGGDDVKSAWPLWAGPHT
Subjt:  GSSQGAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFA----------------------------TEVRRGADDILEEGGDDVKSAWPLWAGPHT

Query:  CYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSST
        CYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLG+GFARSIG +IT  F V LV QRLLVVLL HTTVGSST
Subjt:  CYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSST

Query:  GVKS
        GVKS
Subjt:  GVKS

KAE8675539.1 hypothetical protein F3Y22_tig00111662pilonHSYRG00162 [Hibiscus syriacus]1.3e-8182.05Show/hide
Query:  VEPRAREGSSQGAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV-------RRGADDILE-----EGGDDVKSAWPLWAGPHTCYNGNYNGK
        + P      +  AAWLSSARVVRCLVKSYNERNPRFVLLRHA KEKVFATEV       RR      E     EGGDDVKSAWPLWAGPHTCYNGNYNGK
Subjt:  VEPRAREGSSQGAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV-------RRGADDILE-----EGGDDVKSAWPLWAGPHTCYNGNYNGK

Query:  QGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSSTGVKS
        QGCK ERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTA HTLG+GFARSIGPMITHDF VPLVPQ LLVVLLAHTTVGSSTGVKS
Subjt:  QGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSSTGVKS

KAF3452171.1 hypothetical protein FNV43_RR08269 [Rhamnella rubrinervis]4.5e-8278.37Show/hide
Query:  AAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEVRR-----------------------GADDI---LEE-----------GGDDVKSAWPLWA
        AAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATE+ R                       G DD+    E+           GGDDVKSAWPLWA
Subjt:  AAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEVRR-----------------------GADDI---LEE-----------GGDDVKSAWPLWA

Query:  GPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTV
        GPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLG+GFARSIGPMITHDF VPLVPQRLLVVLLAHTTV
Subjt:  GPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTV

Query:  GSSTGVKS
        GSSTGVKS
Subjt:  GSSTGVKS

PKI31644.1 hypothetical protein CRG98_047964 [Punica granatum]4.4e-8589.13Show/hide
Query:  GAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV-------RRGADDILE-----EGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKD
        GAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV       RR      E     EGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKD
Subjt:  GAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV-------RRGADDILE-----EGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKD

Query:  CLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSSTGVKS
        CLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLG+GFARSIGPMITHDF VPLVPQRLLVVLLAHTTVGSSTGVKS
Subjt:  CLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSSTGVKS

PNY14921.1 ribosomal protein S10 [Trifolium pratense]2.3e-8686.08Show/hide
Query:  GSSQGAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV------------RRG------ADDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQ
        GS   AAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV            RR       A DILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQ
Subjt:  GSSQGAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV------------RRG------ADDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQ

Query:  GCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSSTGVKS
        GCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVN YPGPVHTARHTLG+GFARSIGPMITHDF VPLVPQRLLVVLL HTTVGSSTGVKS
Subjt:  GCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSSTGVKS

TrEMBL top hitse value%identityAlignment
A0A2I0HIY1 Uncharacterized protein ycf682.1e-8589.13Show/hide
Query:  GAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV-------RRGADDILE-----EGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKD
        GAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV       RR      E     EGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKD
Subjt:  GAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV-------RRGADDILE-----EGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKD

Query:  CLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSSTGVKS
        CLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLG+GFARSIGPMITHDF VPLVPQRLLVVLLAHTTVGSSTGVKS
Subjt:  CLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSSTGVKS

A0A2K3PI15 Uncharacterized protein ycf681.1e-8686.08Show/hide
Query:  GSSQGAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV------------RRG------ADDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQ
        GS   AAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV            RR       A DILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQ
Subjt:  GSSQGAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV------------RRG------ADDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQ

Query:  GCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSSTGVKS
        GCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVN YPGPVHTARHTLG+GFARSIGPMITHDF VPLVPQRLLVVLL HTTVGSSTGVKS
Subjt:  GCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSSTGVKS

A0A2N9GHW4 Uncharacterized protein ycf684.9e-7479.89Show/hide
Query:  GSSQGAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV-------RRGADDILE-----EGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAER
        GS   AAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV       RR      E     EGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAER
Subjt:  GSSQGAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV-------RRGADDILE-----EGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAER

Query:  IRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSST
        IRK+CLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLG+GFARSIGP ITHDF VPLVPQ  L +  A   + S T
Subjt:  IRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSST

A0A6A2YFP2 Uncharacterized protein ycf686.4e-8282.05Show/hide
Query:  VEPRAREGSSQGAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV-------RRGADDILE-----EGGDDVKSAWPLWAGPHTCYNGNYNGK
        + P      +  AAWLSSARVVRCLVKSYNERNPRFVLLRHA KEKVFATEV       RR      E     EGGDDVKSAWPLWAGPHTCYNGNYNGK
Subjt:  VEPRAREGSSQGAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEV-------RRGADDILE-----EGGDDVKSAWPLWAGPHTCYNGNYNGK

Query:  QGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSSTGVKS
        QGCK ERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTA HTLG+GFARSIGPMITHDF VPLVPQ LLVVLLAHTTVGSSTGVKS
Subjt:  QGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSSTGVKS

A0A6D2JF37 Uncharacterized protein ycf681.2e-7776.47Show/hide
Query:  GSSQGAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFA----------------------------TEVRRGADDILEEGGDDVKSAWPLWAGPHT
        GS   AAWLSSARVVRCLVKSYNERNPR VLLRHAPKEK  A                            T  R  A DILEEGGDDVKSAWPLWAGPHT
Subjt:  GSSQGAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFA----------------------------TEVRRGADDILEEGGDDVKSAWPLWAGPHT

Query:  CYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSST
        CYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLG+GFARSIG +IT  F V LV QRLLVVLL HTTVGSST
Subjt:  CYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSST

Query:  GVKS
        GVKS
Subjt:  GVKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAGACGGACGAATGCTGCTGGGAGAGTGCAGAATAGACCAGCTGAAGATGGAAGAGTGAACGTTGTGGAGCCTAGAGCCCGGGAAGGAAGCTCTCAAGGTGCTGC
ATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTATAACGAGCGAAACCCTCGTTTTGTGTTGCTGAGACATGCGCCTAAGGAGAAAGTCTTTGCAACCG
AAGTTCGCCGAGGAGCCGATGATATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATGGGCTGGGCCACACACGTGCTACAATGGCAATTACAATGGG
AAGCAAGGCTGTAAGGCGGAGCGAATCCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCATGC
CGCGGTGAATATGTACCCGGGCCCTGTACATACCGCCCGTCACACCCTGGGAATGGGTTTCGCCCGAAGCATCGGACCAATGATCACCCATGACTTCCGTGTACCACTAG
TGCCACAAAGGCTTTTGGTGGTCTTATTGGCGCATACCACGGTGGGGTCTTCGACTGGGGTGAAGTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAGACGGACGAATGCTGCTGGGAGAGTGCAGAATAGACCAGCTGAAGATGGAAGAGTGAACGTTGTGGAGCCTAGAGCCCGGGAAGGAAGCTCTCAAGGTGCTGC
ATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTATAACGAGCGAAACCCTCGTTTTGTGTTGCTGAGACATGCGCCTAAGGAGAAAGTCTTTGCAACCG
AAGTTCGCCGAGGAGCCGATGATATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATGGGCTGGGCCACACACGTGCTACAATGGCAATTACAATGGG
AAGCAAGGCTGTAAGGCGGAGCGAATCCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCATGC
CGCGGTGAATATGTACCCGGGCCCTGTACATACCGCCCGTCACACCCTGGGAATGGGTTTCGCCCGAAGCATCGGACCAATGATCACCCATGACTTCCGTGTACCACTAG
TGCCACAAAGGCTTTTGGTGGTCTTATTGGCGCATACCACGGTGGGGTCTTCGACTGGGGTGAAGTCGTAA
Protein sequenceShow/hide protein sequence
MFRRTNAAGRVQNRPAEDGRVNVVEPRAREGSSQGAAWLSSARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEVRRGADDILEEGGDDVKSAWPLWAGPHTCYNGNYNG
KQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSSTGVKS