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HG10008880 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008880
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiondof zinc finger protein DOF4.6-like
Genome locationChr06:426226..426555
RNA-Seq ExpressionHG10008880
SyntenyHG10008880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579311.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]1.8e-0848.04Show/hide
Query:  APAAGVFNGGGGFGLNELKPPK--------------------------------------LKQSNGRDEFAENRGG--HGGDNNNNNSGGGFWNGMLGGG
        A AAGVFNG GGFG NELKP                                        LKQSNG DEF +NRGG  HGGD    NS GGFWNGMLGGG
Subjt:  APAAGVFNGGGGFGLNELKPPK--------------------------------------LKQSNGRDEFAENRGG--HGGDNNNNNSGGGFWNGMLGGG

Query:  SW
        SW
Subjt:  SW

KAG7016811.1 Dof zinc finger protein DOF4.6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-0848.51Show/hide
Query:  APAAGVFNGGGGFGLNELKPPK-------------------------------------LKQSNGRDEFAENRGG--HGGDNNNNNSGGGFWNGMLGGGS
        A AAGVFNG GGFG NELKP                                       LKQSNG DEF +NRGG  HGGD    NS GGFWNGMLGGGS
Subjt:  APAAGVFNGGGGFGLNELKPPK-------------------------------------LKQSNGRDEFAENRGG--HGGDNNNNNSGGGFWNGMLGGGS

Query:  W
        W
Subjt:  W

XP_004145942.2 dof zinc finger protein DOF2.5 [Cucumis sativus]8.0e-0948.57Show/hide
Query:  APAAGVFNGGGGFGLNELKPP-------------------------------------KLKQSNGRDEFAENRGGHGGDNNN----NNSGG--GFWNGML
        APA G+FNG GGFGLNELKPP                                      +KQSN  +   ENRGGHGGDNNN    NNSGG  GFWNGML
Subjt:  APAAGVFNGGGGFGLNELKPP-------------------------------------KLKQSNGRDEFAENRGGHGGDNNN----NNSGG--GFWNGML

Query:  GGGSW
        GGGSW
Subjt:  GGGSW

XP_023521518.1 dof zinc finger protein 1-like [Cucurbita pepo subsp. pepo]8.0e-0949.49Show/hide
Query:  APAAGVFNGGGGFGLNELKPPK-----------------------------------LKQSNGRDEFAENRGG--HGGDNNNNNSGGGFWNGMLGGGSW
        A AAGVFNG GGFG NELKP                                     LKQSNG DEF +NRGG  HGGD    NS GGFWNGMLGGGSW
Subjt:  APAAGVFNGGGGFGLNELKPPK-----------------------------------LKQSNGRDEFAENRGG--HGGDNNNNNSGGGFWNGMLGGGSW

XP_038906804.1 dof zinc finger protein DOF4.6-like [Benincasa hispida]2.8e-0949.02Show/hide
Query:  APAAGVFNGGGGFGLNELKPP---------------------------------------KLKQSNGRDEFA-ENRGGHGGDNNNNNSGGGFWNGMLGGG
        APA GVFN GGGFGLNELKPP                                       +LKQSNGR EF  +NRGG     +NNNSGGGFWNGMLGGG
Subjt:  APAAGVFNGGGGFGLNELKPP---------------------------------------KLKQSNGRDEFA-ENRGGHGGDNNNNNSGGGFWNGMLGGG

Query:  SW
        SW
Subjt:  SW

TrEMBL top hitse value%identityAlignment
A0A0A0KJS3 Dof-type domain-containing protein3.9e-0948.57Show/hide
Query:  APAAGVFNGGGGFGLNELKPP-------------------------------------KLKQSNGRDEFAENRGGHGGDNNN----NNSGG--GFWNGML
        APA G+FNG GGFGLNELKPP                                      +KQSN  +   ENRGGHGGDNNN    NNSGG  GFWNGML
Subjt:  APAAGVFNGGGGFGLNELKPP-------------------------------------KLKQSNGRDEFAENRGGHGGDNNN----NNSGG--GFWNGML

Query:  GGGSW
        GGGSW
Subjt:  GGGSW

A0A1S3AV39 dof zinc finger protein DOF4.6-like1.1e-0645.28Show/hide
Query:  APAAGVFNGGGGFGLNELKPP-------------------------------------KLKQSNGRDEFAENRGGHGGDNN-----NNNSGG--GFWNGM
        APA G+FN  GGFGLNELKPP                                      +KQSN  +   +NRGG GGDNN     NNNSGG  GFWNGM
Subjt:  APAAGVFNGGGGFGLNELKPP-------------------------------------KLKQSNGRDEFAENRGGHGGDNN-----NNNSGG--GFWNGM

Query:  LGGGSW
        LGGGSW
Subjt:  LGGGSW

A0A5D3C6H0 Dof zinc finger protein DOF4.6-like8.1e-0745.71Show/hide
Query:  APAAGVFNGGGGFGLNELKPP------------------------------------KLKQSNGRDEFAENRGGHGGDNN-----NNNSGG--GFWNGML
        APA G+FN  GGFGLNELKPP                                     +KQSN  +   +NRGG GGDNN     NNNSGG  GFWNGML
Subjt:  APAAGVFNGGGGFGLNELKPP------------------------------------KLKQSNGRDEFAENRGGHGGDNN-----NNNSGG--GFWNGML

Query:  GGGSW
        GGGSW
Subjt:  GGGSW

A0A6J1E6H2 dof zinc finger protein DOF4.6-like8.7e-0948.04Show/hide
Query:  APAAGVFNGGGGFGLNELKPPK--------------------------------------LKQSNGRDEFAENRGG--HGGDNNNNNSGGGFWNGMLGGG
        A AAGVFNG GGFG NELKP                                        LKQSNG DEF +NRGG  HGGD    NS GGFWNGMLGGG
Subjt:  APAAGVFNGGGGFGLNELKPPK--------------------------------------LKQSNGRDEFAENRGG--HGGDNNNNNSGGGFWNGMLGGG

Query:  SW
        SW
Subjt:  SW

A0A6J1I6C6 dof zinc finger protein DOF2.5-like3.6e-0747Show/hide
Query:  APAAGVFNGGGGFGLNELKPPK------------------------------------LKQSNGRDEFAENRGG--HGGDNNNNNSGGGFWNGMLGGGSW
        A AAGVFN  GGFG NELKP                                      LKQSNG DEF +NRGG  HGGD    NS GGFWNGML GGSW
Subjt:  APAAGVFNGGGGFGLNELKPPK------------------------------------LKQSNGRDEFAENRGG--HGGDNNNNNSGGGFWNGMLGGGSW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGTGGCACCGGCGGCCGGAGTGTTCAATGGCGGCGGCGGGTTTGGATTGAATGAGCTGAAGCCACCAAAATTGAAGCAAAGTAATGGGAGAGATGAATTTGCGGA
GAATAGAGGAGGGCATGGAGGGGATAATAATAATAATAATTCAGGTGGTGGATTTTGGAATGGGATGTTGGGAGGTGGATCATGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGGTGGCACCGGCGGCCGGAGTGTTCAATGGCGGCGGCGGGTTTGGATTGAATGAGCTGAAGCCACCAAAATTGAAGCAAAGTAATGGGAGAGATGAATTTGCGGA
GAATAGAGGAGGGCATGGAGGGGATAATAATAATAATAATTCAGGTGGTGGATTTTGGAATGGGATGTTGGGAGGTGGATCATGGTAA
Protein sequenceShow/hide protein sequence
MTVAPAAGVFNGGGGFGLNELKPPKLKQSNGRDEFAENRGGHGGDNNNNNSGGGFWNGMLGGGSW